RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 SAMD13Q5VXD3 122 aa12.08□□□□□ -0.47
TRAF1-201ENST00000373887 CLEC19AQ6UXS0 136 aa12.08□□□□□ -0.47
TRAF1-201ENST00000373887 SLC25A38Q96DW6 304 aa12.08□□□□□ -0.47
TRAF1-201ENST00000373887 FBXL15Q9H469 300 aa12.08□□□□□ -0.47
TRAF1-201ENST00000373887 IGLV3-19P01714 112 aa12.08□□□□□ -0.48
TRAF1-201ENST00000373887 GPR183P32249 361 aa12.08□□□□□ -0.48
TRAF1-201ENST00000373887 CKS1BP61024 79 aa12.08□□□□□ -0.48
TRAF1-201ENST00000373887 PKIBQ9C010 78 aa12.08□□□□□ -0.48
TRAF1-201ENST00000373887 H3BUT2 72 aa12.08□□□□□ -0.48
TRAF1-201ENST00000373887 CSRP1P21291 193 aaKnown RBP12.08□□□□□ -0.48
TRAF1-201ENST00000373887 TEX29Q8N6K0 151 aa12.08□□□□□ -0.48
TRAF1-201ENST00000373887 PHLDA1Q8WV24 401 aaPredicted RBP12.08□□□□□ -0.48
TRAF1-201ENST00000373887 IGKV1D-33P01593 117 aa12.08□□□□□ -0.48
TRAF1-201ENST00000373887 IGKV1-33P01594 117 aa12.08□□□□□ -0.48
TRAF1-201ENST00000373887 Q5BKY6 102 aa12.08□□□□□ -0.48
TRAF1-201ENST00000373887 TCF23Q7RTU1 214 aa12.08□□□□□ -0.48
TRAF1-201ENST00000373887 ZNF837Q96EG3 531 aaPredicted RBP12.08□□□□□ -0.48
TRAF1-201ENST00000373887 NXT2Q9NPJ8 142 aaKnown RBP12.08□□□□□ -0.48
TRAF1-201ENST00000373887 WDYHV1Q96HA8 205 aa12.08□□□□□ -0.48
TRAF1-201ENST00000373887 FNDC4Q9H6D8 234 aaPredicted RBP12.08□□□□□ -0.48
TRAF1-201ENST00000373887 FBXL7Q9UJT9 491 aa12.08□□□□□ -0.48
TRAF1-201ENST00000373887 IGKV1D-43A0A0B4J1Z2 117 aa12.07□□□□□ -0.48
TRAF1-201ENST00000373887 PRB4P10163 310 aaPredicted RBP12.07□□□□□ -0.48
TRAF1-201ENST00000373887 FAM216BQ8N7L0 139 aa12.07□□□□□ -0.48
TRAF1-201ENST00000373887 TBR1Q16650 682 aa12.07□□□□□ -0.48
TRAF1-201ENST00000373887 ZNF729A6NN14 1252 aaPredicted RBP12.07□□□□□ -0.48
TRAF1-201ENST00000373887 UNQ9370/PRO34162Q6UXP9 181 aa12.07□□□□□ -0.48
TRAF1-201ENST00000373887 PATJQ8NI35 1801 aa12.07□□□□□ -0.48
TRAF1-201ENST00000373887 RIPPLY3P57055 190 aa12.07□□□□□ -0.48
TRAF1-201ENST00000373887 C11orf44Q8N8P7 122 aa12.07□□□□□ -0.48
TRAF1-201ENST00000373887 NPCDR1Q9BY65 106 aa12.07□□□□□ -0.48
TRAF1-201ENST00000373887 MEGF9Q9H1U4 602 aa12.07□□□□□ -0.48
TRAF1-201ENST00000373887 IL36BQ9NZH7 164 aa12.07□□□□□ -0.48
TRAF1-201ENST00000373887 C19orf67A6NJJ6 358 aa12.07□□□□□ -0.48
TRAF1-201ENST00000373887 ATP5LO75964 103 aa12.07□□□□□ -0.48
TRAF1-201ENST00000373887 ZNF708P17019 499 aa12.07□□□□□ -0.48
TRAF1-201ENST00000373887 GNLYP22749 145 aa12.07□□□□□ -0.48
TRAF1-201ENST00000373887 FOXD3Q9UJU5 478 aaPredicted RBP12.07□□□□□ -0.48
TRAF1-201ENST00000373887 PINLYPA6NC86 204 aa12.06□□□□□ -0.48
TRAF1-201ENST00000373887 TFF1P04155 84 aa12.06□□□□□ -0.48
TRAF1-201ENST00000373887 OR11H4Q8NGC9 324 aa12.06□□□□□ -0.48
TRAF1-201ENST00000373887 A0A0U1RRA0 63 aa12.06□□□□□ -0.48
TRAF1-201ENST00000373887 IGHV3-11P01762 117 aa12.06□□□□□ -0.48
TRAF1-201ENST00000373887 C1QTNF12Q5T7M4 302 aa12.06□□□□□ -0.48
TRAF1-201ENST00000373887 Q96M66 194 aa12.06□□□□□ -0.48
TRAF1-201ENST00000373887 G6PC2Q9NQR9 355 aa12.06□□□□□ -0.48
TRAF1-201ENST00000373887 IGHV3-64A0A075B6Q5 118 aa12.06□□□□□ -0.48
TRAF1-201ENST00000373887 IFNL4K9M1U5 179 aa12.06□□□□□ -0.48
TRAF1-201ENST00000373887 NBEAP1P0C6P0 100 aa12.06□□□□□ -0.48
TRAF1-201ENST00000373887 HOXB1P14653 301 aaPredicted RBP12.06□□□□□ -0.48
TRAF1-201ENST00000373887 OR10J3Q5JRS4 329 aa12.06□□□□□ -0.48
TRAF1-201ENST00000373887 C19orf24Q9BVV8 132 aa12.06□□□□□ -0.48
TRAF1-201ENST00000373887 IGHV2OR16-5A0A0B4J2B6 119 aa12.06□□□□□ -0.48
TRAF1-201ENST00000373887 TMEM42Q69YG0 159 aa12.06□□□□□ -0.48
TRAF1-201ENST00000373887 JMJD8Q96S16 334 aa12.06□□□□□ -0.48
TRAF1-201ENST00000373887 SDF2L1Q9HCN8 221 aa12.06□□□□□ -0.48
TRAF1-201ENST00000373887 SEC16AO15027 2179 aa12.06□□□□□ -0.48
TRAF1-201ENST00000373887 FAM90A10PA6NDY2 464 aa12.06□□□□□ -0.48
TRAF1-201ENST00000373887 FAM90A18PA6NE21 464 aa12.06□□□□□ -0.48
TRAF1-201ENST00000373887 FAM90A16PA6NEW6 464 aa12.06□□□□□ -0.48
TRAF1-201ENST00000373887 FAM90A20PA6NIJ5 464 aa12.06□□□□□ -0.48
TRAF1-201ENST00000373887 FAM90A8PA6NJQ4 464 aa12.06□□□□□ -0.48
TRAF1-201ENST00000373887 FAM90A7PA6NKC0 464 aa12.06□□□□□ -0.48
TRAF1-201ENST00000373887 FAM90A22PA8MWA6 464 aa12.06□□□□□ -0.48
TRAF1-201ENST00000373887 FAM90A12PA8MX19 464 aa12.06□□□□□ -0.48
TRAF1-201ENST00000373887 FAM90A5PA8MXJ8 464 aa12.06□□□□□ -0.48
TRAF1-201ENST00000373887 FAM90A23PA8MXZ1 464 aa12.06□□□□□ -0.48
TRAF1-201ENST00000373887 FAM90A15PP0C7V4 464 aa12.06□□□□□ -0.48
TRAF1-201ENST00000373887 FAM90A13PP0C7W8 464 aa12.06□□□□□ -0.48
TRAF1-201ENST00000373887 FAM90A14PP0C7W9 464 aa12.06□□□□□ -0.48
TRAF1-201ENST00000373887 FAM90A24PP0C7X0 464 aa12.06□□□□□ -0.48
TRAF1-201ENST00000373887 ATP5G3P48201 142 aa12.06□□□□□ -0.48
TRAF1-201ENST00000373887 FAM89BQ8N5H3 189 aa12.06□□□□□ -0.48
TRAF1-201ENST00000373887 OR5P3Q8WZ94 311 aa12.06□□□□□ -0.48
TRAF1-201ENST00000373887 TRAV2A0A0B4J234 112 aa12.05□□□□□ -0.48
TRAF1-201ENST00000373887 MRPL14Q6P1L8 145 aaKnown RBP12.05□□□□□ -0.48
TRAF1-201ENST00000373887 RIPPLY2Q5TAB7 128 aa12.05□□□□□ -0.48
TRAF1-201ENST00000373887 POC1AQ8NBT0 407 aa12.05□□□□□ -0.48
TRAF1-201ENST00000373887 RPP21Q9H633 154 aaKnown RBP12.05□□□□□ -0.48
TRAF1-201ENST00000373887 DEPPQ9NTK1 212 aa12.05□□□□□ -0.48
TRAF1-201ENST00000373887 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.05□□□□□ -0.48
TRAF1-201ENST00000373887 NPC2P61916 151 aa12.05□□□□□ -0.48
TRAF1-201ENST00000373887 KIR3DL3Q8N743 410 aa12.05□□□□□ -0.48
TRAF1-201ENST00000373887 WFDC12Q8WWY7 111 aa12.05□□□□□ -0.48
TRAF1-201ENST00000373887 IMMP1LQ96LU5 166 aa12.05□□□□□ -0.48
TRAF1-201ENST00000373887 GATA2P23769 480 aaPredicted RBP12.04□□□□□ -0.48
TRAF1-201ENST00000373887 PTGDSP41222 190 aa12.04□□□□□ -0.48
TRAF1-201ENST00000373887 FER1L6-AS1Q8NA97 138 aa12.04□□□□□ -0.48
TRAF1-201ENST00000373887 ANAPC13Q9BS18 74 aa12.04□□□□□ -0.48
TRAF1-201ENST00000373887 NHP2Q9NX24 153 aaKnown RBP12.04□□□□□ -0.48
TRAF1-201ENST00000373887 SPRR3Q9UBC9 169 aa12.04□□□□□ -0.48
TRAF1-201ENST00000373887 TRAV8-4A0A0B4J246 113 aa12.04□□□□□ -0.48
TRAF1-201ENST00000373887 ASPHD2Q6ICH7 369 aa12.04□□□□□ -0.48
TRAF1-201ENST00000373887 UNQ6494/PRO21346Q6UXR6 183 aa12.04□□□□□ -0.48
TRAF1-201ENST00000373887 ZNF236Q9UL36 1845 aa12.04□□□□□ -0.48
TRAF1-201ENST00000373887 PPP1R27Q86WC6 154 aa12.04□□□□□ -0.48
TRAF1-201ENST00000373887 SELENOKQ9Y6D0 94 aa12.04□□□□□ -0.48
TRAF1-201ENST00000373887 A0A1B0GUT8 65 aa12.04□□□□□ -0.48
TRAF1-201ENST00000373887 GNG5P63218 68 aa12.04□□□□□ -0.48
TRAF1-201ENST00000373887 OR2K2Q8NGT1 345 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms