RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 SLC35E1Q96K37 410 aa10.4□□□□□ -0.74
CTPS1-202ENST00000372621 MS4A10Q96PG2 267 aa10.4□□□□□ -0.74
CTPS1-202ENST00000372621 LRFN3Q9BTN0 628 aa10.4□□□□□ -0.74
CTPS1-202ENST00000372621 TMEM167BQ9NRX6 74 aa10.4□□□□□ -0.74
CTPS1-202ENST00000372621 RPUSD1Q9UJJ7 312 aaKnown RBP10.4□□□□□ -0.74
CTPS1-202ENST00000372621 LAMA5O15230 3695 aa10.4□□□□□ -0.74
CTPS1-202ENST00000372621 PLCE1Q9P212 2302 aa10.4□□□□□ -0.74
CTPS1-202ENST00000372621 SCGB1D1O95968 90 aa10.4□□□□□ -0.74
CTPS1-202ENST00000372621 FRMD6-AS1P0C7T7 363 aa10.4□□□□□ -0.74
CTPS1-202ENST00000372621 TMEM30BQ3MIR4 351 aa10.4□□□□□ -0.74
CTPS1-202ENST00000372621 FAM216BQ8N7L0 139 aa10.4□□□□□ -0.74
CTPS1-202ENST00000372621 CCL13Q99616 98 aa10.4□□□□□ -0.74
CTPS1-202ENST00000372621 HINT2Q9BX68 163 aa10.4□□□□□ -0.74
CTPS1-202ENST00000372621 A8MXE2 369 aa10.39□□□□□ -0.75
CTPS1-202ENST00000372621 ATP5IP56385 69 aaPredicted RBP10.39□□□□□ -0.75
CTPS1-202ENST00000372621 TNFAIP6P98066 277 aaPredicted RBP10.39□□□□□ -0.75
CTPS1-202ENST00000372621 OR5I1Q13606 314 aa10.39□□□□□ -0.75
CTPS1-202ENST00000372621 RPEL1Q2QD12 228 aa10.39□□□□□ -0.75
CTPS1-202ENST00000372621 C22orf34Q6ZV56 151 aa10.39□□□□□ -0.75
CTPS1-202ENST00000372621 MMD2Q8IY49 270 aa10.39□□□□□ -0.75
CTPS1-202ENST00000372621 DEFB124Q8NES8 71 aa10.39□□□□□ -0.75
CTPS1-202ENST00000372621 BET1LQ9NYM9 111 aa10.39□□□□□ -0.75
CTPS1-202ENST00000372621 ICE1Q9Y2F5 2266 aa10.39□□□□□ -0.75
CTPS1-202ENST00000372621 SPAARA0A1B0GVQ0 90 aa10.39□□□□□ -0.75
CTPS1-202ENST00000372621 OR5G3P0C626 314 aa10.39□□□□□ -0.75
CTPS1-202ENST00000372621 CRYBB3P26998 211 aa10.39□□□□□ -0.75
CTPS1-202ENST00000372621 OR10J1P30954 320 aa10.39□□□□□ -0.75
CTPS1-202ENST00000372621 ERVFC1-1P60608 527 aa10.39□□□□□ -0.75
CTPS1-202ENST00000372621 CENPWQ5EE01 88 aa10.39□□□□□ -0.75
CTPS1-202ENST00000372621 Q6ZWC4 215 aa10.39□□□□□ -0.75
CTPS1-202ENST00000372621 ZNRD1Q9P1U0 126 aa10.39□□□□□ -0.75
CTPS1-202ENST00000372621 HELTA6NFD8 242 aa10.39□□□□□ -0.75
CTPS1-202ENST00000372621 EREGO14944 169 aa10.39□□□□□ -0.75
CTPS1-202ENST00000372621 RNASE2P10153 161 aaKnown RBP10.39□□□□□ -0.75
CTPS1-202ENST00000372621 PAFAH1B2P68402 229 aa10.39□□□□□ -0.75
CTPS1-202ENST00000372621 TEX36Q5VZQ5 186 aa10.39□□□□□ -0.75
CTPS1-202ENST00000372621 DEFB108BQ8NET1 73 aa10.39□□□□□ -0.75
CTPS1-202ENST00000372621 OR1L6Q8NGR2 347 aa10.39□□□□□ -0.75
CTPS1-202ENST00000372621 OR1L8Q8NGR8 309 aa10.39□□□□□ -0.75
CTPS1-202ENST00000372621 SNRNP40Q96DI7 357 aaKnown RBP10.39□□□□□ -0.75
CTPS1-202ENST00000372621 SLC35D1Q9NTN3 355 aa10.39□□□□□ -0.75
CTPS1-202ENST00000372621 TMEM106BQ9NUM4 274 aa10.39□□□□□ -0.75
CTPS1-202ENST00000372621 TECRQ9NZ01 308 aaKnown RBP10.39□□□□□ -0.75
CTPS1-202ENST00000372621 GGTLC3B5MD39 225 aa10.38□□□□□ -0.75
CTPS1-202ENST00000372621 CRISP2P16562 243 aa10.38□□□□□ -0.75
CTPS1-202ENST00000372621 GATA2P23769 480 aaPredicted RBP10.38□□□□□ -0.75
CTPS1-202ENST00000372621 GNG4P50150 75 aa10.38□□□□□ -0.75
CTPS1-202ENST00000372621 PQLC2Q6ZP29 291 aa10.38□□□□□ -0.75
CTPS1-202ENST00000372621 ZNF833PQ6ZTB9 187 aa10.38□□□□□ -0.75
CTPS1-202ENST00000372621 OR5B3Q8NH48 314 aa10.38□□□□□ -0.75
CTPS1-202ENST00000372621 C19orf24Q9BVV8 132 aa10.38□□□□□ -0.75
CTPS1-202ENST00000372621 TRBV9A0A0B4J1U6 114 aa10.38□□□□□ -0.75
CTPS1-202ENST00000372621 SAA1P0DJI8 122 aaPredicted RBP10.38□□□□□ -0.75
CTPS1-202ENST00000372621 Q0VG73 95 aa10.38□□□□□ -0.75
CTPS1-202ENST00000372621 MLANAQ16655 118 aa10.38□□□□□ -0.75
CTPS1-202ENST00000372621 RTL8BQ17RB0 113 aa10.38□□□□□ -0.75
CTPS1-202ENST00000372621 ZADH2Q8N4Q0 377 aa10.38□□□□□ -0.75
CTPS1-202ENST00000372621 GNB1LQ9BYB4 327 aa10.38□□□□□ -0.75
CTPS1-202ENST00000372621 PSMB11A5LHX3 300 aa10.37□□□□□ -0.75
CTPS1-202ENST00000372621 SERF1AO75920 110 aa10.37□□□□□ -0.75
CTPS1-202ENST00000372621 IGLV2-8P01709 118 aa10.37□□□□□ -0.75
CTPS1-202ENST00000372621 IGF2-ASQ6U949 168 aa10.37□□□□□ -0.75
CTPS1-202ENST00000372621 IGFL3Q6UXB1 125 aa10.37□□□□□ -0.75
CTPS1-202ENST00000372621 DCAF16Q9NXF7 216 aa10.37□□□□□ -0.75
CTPS1-202ENST00000372621 FCN1O00602 326 aa10.37□□□□□ -0.75
CTPS1-202ENST00000372621 IER3P46695 156 aa10.37□□□□□ -0.75
CTPS1-202ENST00000372621 ST6GALNAC3Q8NDV1 305 aa10.37□□□□□ -0.75
CTPS1-202ENST00000372621 TPPP2P59282 170 aa10.37□□□□□ -0.75
CTPS1-202ENST00000372621 CX3CL1P78423 397 aa10.37□□□□□ -0.75
CTPS1-202ENST00000372621 CD69Q07108 199 aa10.37□□□□□ -0.75
CTPS1-202ENST00000372621 TPTE2P1Q5T6R2 138 aa10.37□□□□□ -0.75
CTPS1-202ENST00000372621 C1orf185Q5T7R7 199 aa10.37□□□□□ -0.75
CTPS1-202ENST00000372621 OR8I2Q8N0Y5 310 aa10.37□□□□□ -0.75
CTPS1-202ENST00000372621 OR9G1Q8NH87 305 aa10.37□□□□□ -0.75
CTPS1-202ENST00000372621 IGF2BP2-AS1Q96M15 143 aa10.37□□□□□ -0.75
CTPS1-202ENST00000372621 SLC25A33Q9BSK2 321 aa10.37□□□□□ -0.75
CTPS1-202ENST00000372621 SNHG12Q9BXW3 62 aa10.37□□□□□ -0.75
CTPS1-202ENST00000372621 OSTCQ9NRP0 149 aa10.37□□□□□ -0.75
CTPS1-202ENST00000372621 SNURFLB1AK76 121 aa10.36□□□□□ -0.75
CTPS1-202ENST00000372621 F2Z2F3 143 aa10.36□□□□□ -0.75
CTPS1-202ENST00000372621 CD33P20138 364 aa10.36□□□□□ -0.75
CTPS1-202ENST00000372621 USF2Q15853 346 aaPredicted RBP10.36□□□□□ -0.75
CTPS1-202ENST00000372621 DOLPP1Q86YN1 238 aa10.36□□□□□ -0.75
CTPS1-202ENST00000372621 OR10W1Q8NGF6 305 aa10.36□□□□□ -0.75
CTPS1-202ENST00000372621 TBX15Q96SF7 602 aa10.36□□□□□ -0.75
CTPS1-202ENST00000372621 PARD6AQ9NPB6 346 aa10.36□□□□□ -0.75
CTPS1-202ENST00000372621 NDUFA4L2Q9NRX3 87 aa10.36□□□□□ -0.75
CTPS1-202ENST00000372621 LINC00312Q9Y6C7 94 aa10.36□□□□□ -0.75
CTPS1-202ENST00000372621 BSNQ9UPA5 3926 aa10.36□□□□□ -0.75
CTPS1-202ENST00000372621 A0A1W2PRE2 83 aa10.36□□□□□ -0.75
CTPS1-202ENST00000372621 NUTF2P61970 127 aaKnown RBP10.36□□□□□ -0.75
CTPS1-202ENST00000372621 RANP62826 216 aaKnown RBP10.36□□□□□ -0.75
CTPS1-202ENST00000372621 TEX43Q6ZNM6 134 aa10.36□□□□□ -0.75
CTPS1-202ENST00000372621 TGIF2LXQ8IUE1 241 aa10.36□□□□□ -0.75
CTPS1-202ENST00000372621 OSR1Q8TAX0 266 aaPredicted RBP10.36□□□□□ -0.75
CTPS1-202ENST00000372621 FAM167A-AS1Q96KT0 104 aa10.36□□□□□ -0.75
CTPS1-202ENST00000372621 RNASE7Q9H1E1 156 aaKnown RBP10.36□□□□□ -0.75
CTPS1-202ENST00000372621 OTOGLQ3ZCN5 2332 aa10.35□□□□□ -0.75
CTPS1-202ENST00000372621 hADV38S2A0JD32 116 aa10.35□□□□□ -0.75
CTPS1-202ENST00000372621 INS-IGF2F8WCM5 200 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms