RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 ATG4DQ86TL0 474 aaPredicted RBP13.08□□□□□ -0.32
GTF3C4-201ENST00000372146 OR2H2O95918 312 aa13.07□□□□□ -0.32
GTF3C4-201ENST00000372146 TFF3Q07654 80 aa13.07□□□□□ -0.32
GTF3C4-201ENST00000372146 PTPRQQ9UMZ3 2332 aa13.07□□□□□ -0.32
GTF3C4-201ENST00000372146 PRSS23O95084 383 aa13.07□□□□□ -0.32
GTF3C4-201ENST00000372146 PMS2CLQ68D20 193 aa13.07□□□□□ -0.32
GTF3C4-201ENST00000372146 INO80CQ6PI98 192 aaPredicted RBP13.07□□□□□ -0.32
GTF3C4-201ENST00000372146 BCL6BQ8N143 479 aaPredicted RBP13.07□□□□□ -0.32
GTF3C4-201ENST00000372146 TET1Q8NFU7 2136 aa13.07□□□□□ -0.32
GTF3C4-201ENST00000372146 MLNRO43193 412 aa13.07□□□□□ -0.32
GTF3C4-201ENST00000372146 SRP19P09132 144 aaKnown RBP13.07□□□□□ -0.32
GTF3C4-201ENST00000372146 ABHD12Q8N2K0 398 aa13.07□□□□□ -0.32
GTF3C4-201ENST00000372146 ELSPBP1Q96BH3 223 aa13.07□□□□□ -0.32
GTF3C4-201ENST00000372146 OBSL1O75147 1896 aa13.07□□□□□ -0.32
GTF3C4-201ENST00000372146 KIAA1551Q9HCM1 1747 aa13.07□□□□□ -0.32
GTF3C4-201ENST00000372146 TRAV8-3A0A0A6YYJ7 113 aa13.07□□□□□ -0.32
GTF3C4-201ENST00000372146 GDF15Q99988 308 aa13.07□□□□□ -0.32
GTF3C4-201ENST00000372146 PRSS53Q2L4Q9 553 aa13.07□□□□□ -0.32
GTF3C4-201ENST00000372146 DSCAML1Q8TD84 2053 aa13.07□□□□□ -0.32
GTF3C4-201ENST00000372146 SORL1Q92673 2214 aa13.06□□□□□ -0.32
GTF3C4-201ENST00000372146 LDLRAD1Q5T700 205 aa13.06□□□□□ -0.32
GTF3C4-201ENST00000372146 RPRMQ9NS64 109 aa13.06□□□□□ -0.32
GTF3C4-201ENST00000372146 UBR3Q6ZT12 1888 aa13.06□□□□□ -0.32
GTF3C4-201ENST00000372146 HOXB3P14651 431 aaPredicted RBP13.06□□□□□ -0.32
GTF3C4-201ENST00000372146 SIRT4Q9Y6E7 314 aaPredicted RBP13.06□□□□□ -0.32
GTF3C4-201ENST00000372146 C3AR1Q16581 482 aa13.06□□□□□ -0.32
GTF3C4-201ENST00000372146 LCNL1Q6ZST4 164 aa13.06□□□□□ -0.32
GTF3C4-201ENST00000372146 FAM106AQ4KMX7 169 aa13.06□□□□□ -0.32
GTF3C4-201ENST00000372146 TMEM74BQ9NUR3 256 aa13.06□□□□□ -0.32
GTF3C4-201ENST00000372146 UMODP07911 640 aa13.06□□□□□ -0.32
GTF3C4-201ENST00000372146 CYP2G1PQ6ZSU1 146 aa13.06□□□□□ -0.32
GTF3C4-201ENST00000372146 HIST3H2BBQ8N257 126 aa13.06□□□□□ -0.32
GTF3C4-201ENST00000372146 TRAV17A0A0B4J275 112 aa13.06□□□□□ -0.32
GTF3C4-201ENST00000372146 SRSF3P84103 164 aaKnown RBP13.06□□□□□ -0.32
GTF3C4-201ENST00000372146 FOXL1Q12952 345 aa13.06□□□□□ -0.32
GTF3C4-201ENST00000372146 CRIM1Q9NZV1 1036 aa13.06□□□□□ -0.32
GTF3C4-201ENST00000372146 CD69Q07108 199 aa13.06□□□□□ -0.32
GTF3C4-201ENST00000372146 VEGFBP49765 207 aa13.05□□□□□ -0.32
GTF3C4-201ENST00000372146 KLK10O43240 276 aa13.05□□□□□ -0.32
GTF3C4-201ENST00000372146 GFRA3O60609 400 aa13.05□□□□□ -0.32
GTF3C4-201ENST00000372146 IL11RAQ14626 422 aa13.05□□□□□ -0.32
GTF3C4-201ENST00000372146 GUSBP1Q15486 140 aa13.05□□□□□ -0.32
GTF3C4-201ENST00000372146 TUBA4BQ9H853 241 aa13.05□□□□□ -0.32
GTF3C4-201ENST00000372146 NPPCP23582 126 aa13.05□□□□□ -0.32
GTF3C4-201ENST00000372146 HS3ST3B1Q9Y662 390 aa13.05□□□□□ -0.32
GTF3C4-201ENST00000372146 PRB3Q04118 309 aaPredicted RBP13.05□□□□□ -0.32
GTF3C4-201ENST00000372146 C17orf99Q6UX52 265 aa13.05□□□□□ -0.32
GTF3C4-201ENST00000372146 ZPLD1Q8TCW7 415 aa13.05□□□□□ -0.32
GTF3C4-201ENST00000372146 OVOL2Q9BRP0 275 aa13.05□□□□□ -0.32
GTF3C4-201ENST00000372146 TMEM187Q14656 261 aa13.05□□□□□ -0.32
GTF3C4-201ENST00000372146 CALYQ9NYX4 217 aa13.05□□□□□ -0.32
GTF3C4-201ENST00000372146 NCOA6Q14686 2063 aaPredicted RBP13.05□□□□□ -0.32
GTF3C4-201ENST00000372146 ADAMTSL3P82987 1691 aa13.05□□□□□ -0.32
GTF3C4-201ENST00000372146 TRAV41A0A0B4J266 112 aa13.05□□□□□ -0.32
GTF3C4-201ENST00000372146 FAM90A2PQ658T7 463 aa13.05□□□□□ -0.32
GTF3C4-201ENST00000372146 LEAP2Q969E1 77 aa13.05□□□□□ -0.32
GTF3C4-201ENST00000372146 JPT2Q9H910 190 aa13.05□□□□□ -0.32
GTF3C4-201ENST00000372146 NEUROG3Q9Y4Z2 214 aa13.05□□□□□ -0.32
GTF3C4-201ENST00000372146 QSER1Q2KHR3 1735 aa13.05□□□□□ -0.32
GTF3C4-201ENST00000372146 CD28P10747 220 aa13.05□□□□□ -0.32
GTF3C4-201ENST00000372146 ATP5G3P48201 142 aa13.05□□□□□ -0.32
GTF3C4-201ENST00000372146 HEPN1Q6WQI6 88 aa13.05□□□□□ -0.32
GTF3C4-201ENST00000372146 IGHV5-51A0A0C4DH38 117 aa13.04□□□□□ -0.32
GTF3C4-201ENST00000372146 KIAA0040Q15053 153 aa13.04□□□□□ -0.32
GTF3C4-201ENST00000372146 CUL9Q8IWT3 2517 aa13.04□□□□□ -0.32
GTF3C4-201ENST00000372146 H3BMM0 161 aa13.04□□□□□ -0.32
GTF3C4-201ENST00000372146 LINC00158P58513 81 aa13.04□□□□□ -0.32
GTF3C4-201ENST00000372146 UBE2WQ96B02 151 aa13.04□□□□□ -0.32
GTF3C4-201ENST00000372146 CCL13Q99616 98 aa13.04□□□□□ -0.32
GTF3C4-201ENST00000372146 LAGE3Q14657 143 aa13.04□□□□□ -0.32
GTF3C4-201ENST00000372146 GTSCR1Q86UQ5 136 aa13.04□□□□□ -0.32
GTF3C4-201ENST00000372146 IGHV3-23P01764 117 aa13.04□□□□□ -0.32
GTF3C4-201ENST00000372146 FSTP19883 344 aa13.04□□□□□ -0.32
GTF3C4-201ENST00000372146 LHX2P50458 406 aa13.04□□□□□ -0.32
GTF3C4-201ENST00000372146 SOX8P57073 446 aa13.04□□□□□ -0.32
GTF3C4-201ENST00000372146 SPRED2Q7Z698 418 aa13.04□□□□□ -0.32
GTF3C4-201ENST00000372146 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.04□□□□□ -0.32
GTF3C4-201ENST00000372146 CEACAM1P13688 526 aa13.04□□□□□ -0.32
GTF3C4-201ENST00000372146 ZNF708P17019 499 aa13.04□□□□□ -0.32
GTF3C4-201ENST00000372146 IL11P20809 199 aa13.04□□□□□ -0.32
GTF3C4-201ENST00000372146 EEF1AKMT3Q96AZ1 226 aa13.04□□□□□ -0.32
GTF3C4-201ENST00000372146 NBEAP1P0C6P0 100 aa13.04□□□□□ -0.32
GTF3C4-201ENST00000372146 CIARTQ8N365 385 aaPredicted RBP13.04□□□□□ -0.32
GTF3C4-201ENST00000372146 SPEM1Q8N4L4 309 aa13.04□□□□□ -0.32
GTF3C4-201ENST00000372146 Q9H3A6 140 aa13.04□□□□□ -0.32
GTF3C4-201ENST00000372146 SS18L2Q9UHA2 77 aa13.04□□□□□ -0.32
GTF3C4-201ENST00000372146 LILRA5A6NI73 299 aa13.04□□□□□ -0.32
GTF3C4-201ENST00000372146 SF3B5Q9BWJ5 86 aaKnown RBP13.04□□□□□ -0.32
GTF3C4-201ENST00000372146 EML5Q05BV3 1969 aa13.03□□□□□ -0.32
GTF3C4-201ENST00000372146 UCN2Q96RP3 112 aa13.03□□□□□ -0.32
GTF3C4-201ENST00000372146 A0A0J9YW62 118 aa13.03□□□□□ -0.32
GTF3C4-201ENST00000372146 IL6RP08887 468 aaPredicted RBP13.03□□□□□ -0.32
GTF3C4-201ENST00000372146 RPL23P62829 140 aaKnown RBP13.03□□□□□ -0.32
GTF3C4-201ENST00000372146 C5orf47Q569G3 176 aa13.03□□□□□ -0.32
GTF3C4-201ENST00000372146 DMRTC2Q8IXT2 367 aaPredicted RBP13.03□□□□□ -0.32
GTF3C4-201ENST00000372146 hDV102S1A0JD36 115 aa13.03□□□□□ -0.32
GTF3C4-201ENST00000372146 LMO7DNF2Z398 122 aa13.03□□□□□ -0.32
GTF3C4-201ENST00000372146 MAGEA5P43359 124 aa13.03□□□□□ -0.32
GTF3C4-201ENST00000372146 RBMY1FQ15415 496 aaKnown RBP13.03□□□□□ -0.32
GTF3C4-201ENST00000372146 SERGEFQ9UGK8 458 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms