RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 SPNP16150 400 aa12.11□□□□□ -0.47
PRPF38B-202ENST00000370022 HIST1H1BP16401 226 aaKnown RBP12.11□□□□□ -0.47
PRPF38B-202ENST00000370022 TPPP2P59282 170 aa12.11□□□□□ -0.47
PRPF38B-202ENST00000370022 RPL23AP62750 156 aaKnown RBP12.11□□□□□ -0.47
PRPF38B-202ENST00000370022 ERHP84090 104 aaKnown RBP12.11□□□□□ -0.47
PRPF38B-202ENST00000370022 KLK9Q2XQG4 91 aa12.11□□□□□ -0.47
PRPF38B-202ENST00000370022 OR1L6Q8NGR2 347 aa12.11□□□□□ -0.47
PRPF38B-202ENST00000370022 HSPB7Q9UBY9 170 aa12.11□□□□□ -0.47
PRPF38B-202ENST00000370022 KLK9Q9UKQ9 250 aa12.11□□□□□ -0.47
PRPF38B-202ENST00000370022 STAB1Q9NY15 2570 aa12.11□□□□□ -0.47
PRPF38B-202ENST00000370022 TRBV9A0A0B4J1U6 114 aa12.1□□□□□ -0.47
PRPF38B-202ENST00000370022 FAM90A26D6RGX4 464 aa12.1□□□□□ -0.47
PRPF38B-202ENST00000370022 HOXA1P49639 335 aaPredicted RBP12.1□□□□□ -0.47
PRPF38B-202ENST00000370022 C2orf68Q2NKX9 166 aa12.1□□□□□ -0.47
PRPF38B-202ENST00000370022 OR2C3Q8N628 320 aa12.1□□□□□ -0.47
PRPF38B-202ENST00000370022 ZNF491Q8N8L2 437 aa12.1□□□□□ -0.47
PRPF38B-202ENST00000370022 USMG5Q96IX5 58 aa12.1□□□□□ -0.47
PRPF38B-202ENST00000370022 MS4A10Q96PG2 267 aa12.1□□□□□ -0.47
PRPF38B-202ENST00000370022 THYN1Q9P016 225 aa12.1□□□□□ -0.47
PRPF38B-202ENST00000370022 FAM223BA6NKX1 122 aa12.09□□□□□ -0.47
PRPF38B-202ENST00000370022 M0QZ24 198 aa12.09□□□□□ -0.47
PRPF38B-202ENST00000370022 REG1AP05451 166 aa12.09□□□□□ -0.47
PRPF38B-202ENST00000370022 BCAP31P51572 246 aa12.09□□□□□ -0.47
PRPF38B-202ENST00000370022 TNFRSF9Q07011 255 aa12.09□□□□□ -0.47
PRPF38B-202ENST00000370022 KIAA0141Q14154 515 aaPredicted RBP12.09□□□□□ -0.47
PRPF38B-202ENST00000370022 LCNL1Q6ZST4 164 aa12.09□□□□□ -0.47
PRPF38B-202ENST00000370022 FAM223AQ8IWN6 122 aa12.09□□□□□ -0.47
PRPF38B-202ENST00000370022 UXS1Q8NBZ7 420 aa12.09□□□□□ -0.47
PRPF38B-202ENST00000370022 ZNF114Q8NC26 417 aa12.09□□□□□ -0.47
PRPF38B-202ENST00000370022 NECAP1Q8NC96 275 aa12.09□□□□□ -0.47
PRPF38B-202ENST00000370022 F11RQ9Y624 299 aaKnown RBP12.09□□□□□ -0.47
PRPF38B-202ENST00000370022 CEBPZOSA8MTT3 80 aa12.09□□□□□ -0.47
PRPF38B-202ENST00000370022 ADARB2-AS1A8MUL3 147 aa12.09□□□□□ -0.47
PRPF38B-202ENST00000370022 OXA1LQ15070 435 aa12.09□□□□□ -0.47
PRPF38B-202ENST00000370022 TATDN3Q17R31 274 aa12.09□□□□□ -0.47
PRPF38B-202ENST00000370022 OR1P1Q8NH06 330 aa12.09□□□□□ -0.47
PRPF38B-202ENST00000370022 C4orf3Q8WVX3 66 aa12.09□□□□□ -0.47
PRPF38B-202ENST00000370022 HIPK2Q9H2X6 1198 aa12.09□□□□□ -0.47
PRPF38B-202ENST00000370022 PRELID1Q9Y255 219 aa12.09□□□□□ -0.47
PRPF38B-202ENST00000370022 IGLV11-55A0A075B6I3 123 aa12.08□□□□□ -0.48
PRPF38B-202ENST00000370022 C13orf42A0A1B0GVH6 325 aa12.08□□□□□ -0.48
PRPF38B-202ENST00000370022 C7orf66A4D0T2 115 aa12.08□□□□□ -0.48
PRPF38B-202ENST00000370022 MED6O75586 246 aa12.08□□□□□ -0.48
PRPF38B-202ENST00000370022 SNCAP37840 140 aa12.08□□□□□ -0.48
PRPF38B-202ENST00000370022 SUB1P53999 127 aaKnown RBP eCLIP12.08□□□□□ -0.48
PRPF38B-202ENST00000370022 RHOGP84095 191 aa12.08□□□□□ -0.48
PRPF38B-202ENST00000370022 IAH1Q2TAA2 248 aaPredicted RBP12.08□□□□□ -0.48
PRPF38B-202ENST00000370022 NSUN5P1Q3KNT7 163 aa12.08□□□□□ -0.48
PRPF38B-202ENST00000370022 SPINK9Q5DT21 86 aa12.08□□□□□ -0.48
PRPF38B-202ENST00000370022 KLHL30-AS1Q8NEE0 82 aa12.08□□□□□ -0.48
PRPF38B-202ENST00000370022 OR4F17Q8NGA8 305 aa12.08□□□□□ -0.48
PRPF38B-202ENST00000370022 FANCD2OSQ96PS1 177 aa12.08□□□□□ -0.48
PRPF38B-202ENST00000370022 OR4F4Q96R69 305 aa12.08□□□□□ -0.48
PRPF38B-202ENST00000370022 FBN3Q75N90 2809 aa12.08□□□□□ -0.48
PRPF38B-202ENST00000370022 A0A1W2PRX2 142 aa12.07□□□□□ -0.48
PRPF38B-202ENST00000370022 MPTX1A8MV57 137 aa12.07□□□□□ -0.48
PRPF38B-202ENST00000370022 NUDT19A8MXV4 375 aa12.07□□□□□ -0.48
PRPF38B-202ENST00000370022 LY86O95711 162 aa12.07□□□□□ -0.48
PRPF38B-202ENST00000370022 PRH1P02810 166 aa12.07□□□□□ -0.48
PRPF38B-202ENST00000370022 HTR2BP41595 481 aa12.07□□□□□ -0.48
PRPF38B-202ENST00000370022 RUNX1Q01196 453 aa12.07□□□□□ -0.48
PRPF38B-202ENST00000370022 FAM209BQ5JX69 171 aa12.07□□□□□ -0.48
PRPF38B-202ENST00000370022 OR4D5Q8NGN0 318 aa12.07□□□□□ -0.48
PRPF38B-202ENST00000370022 OR10C1Q96KK4 312 aa12.07□□□□□ -0.48
PRPF38B-202ENST00000370022 P2RX4Q99571 388 aa12.07□□□□□ -0.48
PRPF38B-202ENST00000370022 HEYLQ9NQ87 328 aaPredicted RBP12.07□□□□□ -0.48
PRPF38B-202ENST00000370022 TET2Q6N021 2002 aaPredicted RBP12.06□□□□□ -0.48
PRPF38B-202ENST00000370022 ATP5G2Q06055 141 aa12.06□□□□□ -0.48
PRPF38B-202ENST00000370022 HIST2H2BDQ6DRA6 164 aa12.06□□□□□ -0.48
PRPF38B-202ENST00000370022 DTD1Q8TEA8 209 aa12.06□□□□□ -0.48
PRPF38B-202ENST00000370022 RBKSQ9H477 322 aa12.06□□□□□ -0.48
PRPF38B-202ENST00000370022 FBXL7Q9UJT9 491 aa12.06□□□□□ -0.48
PRPF38B-202ENST00000370022 TENM1Q9UKZ4 2725 aa12.06□□□□□ -0.48
PRPF38B-202ENST00000370022 C5orf51A6NDU8 294 aa12.05□□□□□ -0.48
PRPF38B-202ENST00000370022 CORTO00230 105 aa12.05□□□□□ -0.48
PRPF38B-202ENST00000370022 SSNA1O43805 119 aa12.05□□□□□ -0.48
PRPF38B-202ENST00000370022 OR2J3O76001 311 aa12.05□□□□□ -0.48
PRPF38B-202ENST00000370022 NXPH3O95157 252 aa12.05□□□□□ -0.48
PRPF38B-202ENST00000370022 LGALS1P09382 135 aaKnown RBP12.05□□□□□ -0.48
PRPF38B-202ENST00000370022 NKX2-1P43699 371 aaPredicted RBP12.05□□□□□ -0.48
PRPF38B-202ENST00000370022 ATP5IP56385 69 aaPredicted RBP12.05□□□□□ -0.48
PRPF38B-202ENST00000370022 ID3Q02535 119 aa12.05□□□□□ -0.48
PRPF38B-202ENST00000370022 C15orf32Q32M92 178 aa12.05□□□□□ -0.48
PRPF38B-202ENST00000370022 BSXQ3C1V8 233 aa12.05□□□□□ -0.48
PRPF38B-202ENST00000370022 SLC25A24Q6NUK1 477 aa12.05□□□□□ -0.48
PRPF38B-202ENST00000370022 GSG1LQ6UXU4 331 aa12.05□□□□□ -0.48
PRPF38B-202ENST00000370022 C19orf35Q6ZS72 473 aa12.05□□□□□ -0.48
PRPF38B-202ENST00000370022 NOXA1Q86UR1 476 aa12.05□□□□□ -0.48
PRPF38B-202ENST00000370022 CXorf58Q96LI9 332 aa12.05□□□□□ -0.48
PRPF38B-202ENST00000370022 CIB3Q96Q77 187 aaPredicted RBP12.05□□□□□ -0.48
PRPF38B-202ENST00000370022 NEURL2Q9BR09 285 aa12.05□□□□□ -0.48
PRPF38B-202ENST00000370022 U3KQ87 197 aa12.05□□□□□ -0.48
PRPF38B-202ENST00000370022 FAM25EA8MYX2 175 aa12.05□□□□□ -0.48
PRPF38B-202ENST00000370022 I3L521 148 aa12.05□□□□□ -0.48
PRPF38B-202ENST00000370022 CCSO14618 274 aa12.05□□□□□ -0.48
PRPF38B-202ENST00000370022 SYNGR2O43760 224 aa12.05□□□□□ -0.48
PRPF38B-202ENST00000370022 C8orf86Q6ZUL3 223 aa12.05□□□□□ -0.48
PRPF38B-202ENST00000370022 SLC24A4Q8NFF2 622 aa12.05□□□□□ -0.48
PRPF38B-202ENST00000370022 C2orf50Q96LR7 162 aa12.05□□□□□ -0.48
PRPF38B-202ENST00000370022 GNB4Q9HAV0 340 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms