RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 TMEM242Q9NWH2 141 aa8.77□□□□□ -1.01
TPM3-212ENST00000368533 RNF114Q9Y508 228 aa8.77□□□□□ -1.01
TPM3-212ENST00000368533 ZNF320A2RRD8 509 aa8.76□□□□□ -1.01
TPM3-212ENST00000368533 ITGB1BP1O14713 200 aa8.76□□□□□ -1.01
TPM3-212ENST00000368533 MMP23AO75900 390 aa8.76□□□□□ -1.01
TPM3-212ENST00000368533 S1PR2O95136 353 aa8.76□□□□□ -1.01
TPM3-212ENST00000368533 SLC25A6P12236 298 aa8.76□□□□□ -1.01
TPM3-212ENST00000368533 COL8A2P25067 703 aa8.76□□□□□ -1.01
TPM3-212ENST00000368533 HINT1P49773 126 aaPredicted RBP8.76□□□□□ -1.01
TPM3-212ENST00000368533 RPL30P62888 115 aaKnown RBP8.76□□□□□ -1.01
TPM3-212ENST00000368533 CATR1Q13166 79 aa8.76□□□□□ -1.01
TPM3-212ENST00000368533 BSXQ3C1V8 233 aa8.76□□□□□ -1.01
TPM3-212ENST00000368533 IMMP2LQ96T52 175 aa8.76□□□□□ -1.01
TPM3-212ENST00000368533 HSPB9Q9BQS6 159 aa8.76□□□□□ -1.01
TPM3-212ENST00000368533 ABCA12Q86UK0 2595 aa8.76□□□□□ -1.01
TPM3-212ENST00000368533 DOPEY1Q5JWR5 2465 aa8.76□□□□□ -1.01
TPM3-212ENST00000368533 C17orf98A8MV24 154 aa8.76□□□□□ -1.01
TPM3-212ENST00000368533 LHBP01229 141 aa8.76□□□□□ -1.01
TPM3-212ENST00000368533 APOBEC3AP31941 199 aaPredicted RBP8.76□□□□□ -1.01
TPM3-212ENST00000368533 PNRC1Q12796 327 aaPredicted RBP8.76□□□□□ -1.01
TPM3-212ENST00000368533 ACTL10Q5JWF8 245 aa8.76□□□□□ -1.01
TPM3-212ENST00000368533 H2BFWTQ7Z2G1 175 aa8.76□□□□□ -1.01
TPM3-212ENST00000368533 MANBALQ9NQG1 85 aa8.76□□□□□ -1.01
TPM3-212ENST00000368533 SELENOKQ9Y6D0 94 aa8.76□□□□□ -1.01
TPM3-212ENST00000368533 OOEPA6NGQ2 149 aa8.76□□□□□ -1.01
TPM3-212ENST00000368533 F2Z2F3 143 aa8.76□□□□□ -1.01
TPM3-212ENST00000368533 IFNA1P01562 189 aa8.76□□□□□ -1.01
TPM3-212ENST00000368533 CCL3L1P16619 93 aa8.76□□□□□ -1.01
TPM3-212ENST00000368533 TNFRSF1AP19438 455 aa8.76□□□□□ -1.01
TPM3-212ENST00000368533 SELENOTP62341 195 aa8.76□□□□□ -1.01
TPM3-212ENST00000368533 RPL23P62829 140 aaKnown RBP8.76□□□□□ -1.01
TPM3-212ENST00000368533 LRRC75BQ2VPJ9 315 aa8.76□□□□□ -1.01
TPM3-212ENST00000368533 C3orf36Q3SXR2 165 aa8.76□□□□□ -1.01
TPM3-212ENST00000368533 TPTE2P1Q5T6R2 138 aa8.76□□□□□ -1.01
TPM3-212ENST00000368533 FAM78BQ5VT40 261 aa8.76□□□□□ -1.01
TPM3-212ENST00000368533 SP5Q6BEB4 398 aaPredicted RBP8.76□□□□□ -1.01
TPM3-212ENST00000368533 C1orf174Q8IYL3 243 aa8.76□□□□□ -1.01
TPM3-212ENST00000368533 OR2T10Q8NGZ9 312 aa8.76□□□□□ -1.01
TPM3-212ENST00000368533 TAF15Q92804 592 aaKnown RBP eCLIP8.76□□□□□ -1.01
TPM3-212ENST00000368533 ZDHHC16Q969W1 377 aa8.76□□□□□ -1.01
TPM3-212ENST00000368533 GAFA1Q96PS6 74 aa8.76□□□□□ -1.01
TPM3-212ENST00000368533 WDR61Q9GZS3 305 aaKnown RBP8.76□□□□□ -1.01
TPM3-212ENST00000368533 OR6C3Q9NZP0 311 aa8.76□□□□□ -1.01
TPM3-212ENST00000368533 HCFC1P51610 2035 aa8.75□□□□□ -1.01
TPM3-212ENST00000368533 FCN3O75636 299 aa8.75□□□□□ -1.01
TPM3-212ENST00000368533 CLDN14O95500 239 aa8.75□□□□□ -1.01
TPM3-212ENST00000368533 TFF3Q07654 80 aa8.75□□□□□ -1.01
TPM3-212ENST00000368533 ZNF645Q8N7E2 425 aa8.75□□□□□ -1.01
TPM3-212ENST00000368533 C5orf30Q96GV9 206 aa8.75□□□□□ -1.01
TPM3-212ENST00000368533 UBTD1Q9HAC8 227 aa8.75□□□□□ -1.01
TPM3-212ENST00000368533 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.75□□□□□ -1.01
TPM3-212ENST00000368533 MBNL3Q9NUK0 354 aaKnown RBP8.75□□□□□ -1.01
TPM3-212ENST00000368533 TMEM106BQ9NUM4 274 aa8.75□□□□□ -1.01
TPM3-212ENST00000368533 VSTM5A8MXK1 200 aa8.75□□□□□ -1.01
TPM3-212ENST00000368533 DEFA4P12838 97 aa8.75□□□□□ -1.01
TPM3-212ENST00000368533 TMEM241Q24JQ0 296 aa8.75□□□□□ -1.01
TPM3-212ENST00000368533 TMEM41BQ5BJD5 291 aa8.75□□□□□ -1.01
TPM3-212ENST00000368533 OR10P1Q8NGE3 313 aa8.75□□□□□ -1.01
TPM3-212ENST00000368533 ITLN2Q8WWU7 325 aaPredicted RBP8.75□□□□□ -1.01
TPM3-212ENST00000368533 RPH3ALQ9UNE2 315 aa8.75□□□□□ -1.01
TPM3-212ENST00000368533 TRAPPC1Q9Y5R8 145 aa8.75□□□□□ -1.01
TPM3-212ENST00000368533 NPIPB11E5RHQ5 1161 aa8.74□□□□□ -1.01
TPM3-212ENST00000368533 RPL39P5Q59GN2 51 aa8.74□□□□□ -1.01
TPM3-212ENST00000368533 PRAMEF5Q5TYX0 476 aa8.74□□□□□ -1.01
TPM3-212ENST00000368533 SLC35E4Q6ICL7 350 aa8.74□□□□□ -1.01
TPM3-212ENST00000368533 ATOH7Q8N100 152 aa8.74□□□□□ -1.01
TPM3-212ENST00000368533 BTF3L4Q96K17 158 aa8.74□□□□□ -1.01
TPM3-212ENST00000368533 PGPEP1LA6NFU8 196 aa8.74□□□□□ -1.01
TPM3-212ENST00000368533 LRRC30A6NM36 301 aa8.74□□□□□ -1.01
TPM3-212ENST00000368533 ZNF134P52741 427 aa8.74□□□□□ -1.01
TPM3-212ENST00000368533 KRTDAPP60985 99 aa8.74□□□□□ -1.01
TPM3-212ENST00000368533 SERF2P84101 59 aa8.74□□□□□ -1.01
TPM3-212ENST00000368533 STUMQ69YW2 141 aa8.74□□□□□ -1.01
TPM3-212ENST00000368533 CMTM2Q8TAZ6 248 aa8.74□□□□□ -1.01
TPM3-212ENST00000368533 PINX1Q96BK5 328 aaKnown RBP8.74□□□□□ -1.01
TPM3-212ENST00000368533 PYGO2Q9BRQ0 406 aa8.74□□□□□ -1.01
TPM3-212ENST00000368533 PPIAL4EA0A075B759 164 aa8.74□□□□□ -1.01
TPM3-212ENST00000368533 IGHV1-69-2A0A0G2JMI3 117 aa8.74□□□□□ -1.01
TPM3-212ENST00000368533 PPIAL4DF5H284 164 aa8.74□□□□□ -1.01
TPM3-212ENST00000368533 MGST3O14880 152 aa8.74□□□□□ -1.01
TPM3-212ENST00000368533 HRASP01112 189 aa8.74□□□□□ -1.01
TPM3-212ENST00000368533 PPIAL4FP0DN26 164 aa8.74□□□□□ -1.01
TPM3-212ENST00000368533 IL3RAP26951 378 aa8.74□□□□□ -1.01
TPM3-212ENST00000368533 ATP6V1FQ16864 119 aa8.74□□□□□ -1.01
TPM3-212ENST00000368533 TMEM183BQ1AE95 376 aa8.74□□□□□ -1.01
TPM3-212ENST00000368533 FFAR4Q5NUL3 377 aa8.74□□□□□ -1.01
TPM3-212ENST00000368533 TXN2Q99757 166 aa8.74□□□□□ -1.01
TPM3-212ENST00000368533 C20orf144Q9BQM9 153 aa8.74□□□□□ -1.01
TPM3-212ENST00000368533 CTDSP1Q9GZU7 261 aa8.74□□□□□ -1.01
TPM3-212ENST00000368533 TMEM178BH3BS89 294 aa8.73□□□□□ -1.01
TPM3-212ENST00000368533 SPINT2O43291 252 aa8.73□□□□□ -1.01
TPM3-212ENST00000368533 GATA4P43694 442 aa8.73□□□□□ -1.01
TPM3-212ENST00000368533 ZNF672Q499Z4 452 aaPredicted RBP8.73□□□□□ -1.01
TPM3-212ENST00000368533 Q6ZN92 141 aa8.73□□□□□ -1.01
TPM3-212ENST00000368533 RPP25LQ8N5L8 163 aaKnown RBP8.73□□□□□ -1.01
TPM3-212ENST00000368533 OR4C5Q8NGB2 326 aa8.73□□□□□ -1.01
TPM3-212ENST00000368533 OR10G4Q8NGN3 311 aa8.73□□□□□ -1.01
TPM3-212ENST00000368533 OR10G9Q8NGN4 311 aa8.73□□□□□ -1.01
TPM3-212ENST00000368533 OR10G7Q8NGN6 311 aa8.73□□□□□ -1.01
TPM3-212ENST00000368533 OR4F5Q8NH21 305 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms