RNA–Protein interactions for RNA: ENST00000366959.4

RPS6KC1-201, Transcript of ribosomal protein S6 kinase C1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene RPS6KC1, Length 5,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-201ENST00000366959 TMEM136Q6ZRR5 245 aa12.02□□□□□ -0.49
RPS6KC1-201ENST00000366959 BEX4Q9NWD9 120 aaPredicted RBP12.02□□□□□ -0.49
RPS6KC1-201ENST00000366959 SCN8AQ9UQD0 1980 aa12.02□□□□□ -0.49
RPS6KC1-201ENST00000366959 PSG9Q00887 426 aa12.02□□□□□ -0.49
RPS6KC1-201ENST00000366959 C19orf54Q5BKX5 351 aa12.02□□□□□ -0.49
RPS6KC1-201ENST00000366959 TMEM70Q9BUB7 260 aa12.02□□□□□ -0.49
RPS6KC1-201ENST00000366959 TMEM106BQ9NUM4 274 aa12.02□□□□□ -0.49
RPS6KC1-201ENST00000366959 DOCK8Q8NF50 2099 aa12.02□□□□□ -0.49
RPS6KC1-201ENST00000366959 CCL3L1P16619 93 aa12.02□□□□□ -0.49
RPS6KC1-201ENST00000366959 RPL23P62829 140 aaKnown RBP12.02□□□□□ -0.49
RPS6KC1-201ENST00000366959 MRPL20Q9BYC9 149 aaKnown RBP12.02□□□□□ -0.49
RPS6KC1-201ENST00000366959 SHANK1Q9Y566 2161 aa12.01□□□□□ -0.49
RPS6KC1-201ENST00000366959 C9JCJ5 164 aa12.01□□□□□ -0.49
RPS6KC1-201ENST00000366959 M0R381 172 aa12.01□□□□□ -0.49
RPS6KC1-201ENST00000366959 RAMP3O60896 148 aa12.01□□□□□ -0.49
RPS6KC1-201ENST00000366959 TIMM23BQ5SRD1 257 aa12.01□□□□□ -0.49
RPS6KC1-201ENST00000366959 USF3Q68DE3 2245 aa12.01□□□□□ -0.49
RPS6KC1-201ENST00000366959 TRBV9A0A0B4J1U6 114 aa12.01□□□□□ -0.49
RPS6KC1-201ENST00000366959 IGHV2OR16-5A0A0B4J2B6 119 aa12.01□□□□□ -0.49
RPS6KC1-201ENST00000366959 NPIPB6E9PJ23 425 aa12.01□□□□□ -0.49
RPS6KC1-201ENST00000366959 CRIPAKQ8N1N5 446 aa12.01□□□□□ -0.49
RPS6KC1-201ENST00000366959 RNASE7Q9H1E1 156 aaKnown RBP12.01□□□□□ -0.49
RPS6KC1-201ENST00000366959 DEPPQ9NTK1 212 aa12.01□□□□□ -0.49
RPS6KC1-201ENST00000366959 NPIPB7O75200 414 aa12.01□□□□□ -0.49
RPS6KC1-201ENST00000366959 RBBP6Q7Z6E9 1792 aaKnown RBP12.01□□□□□ -0.49
RPS6KC1-201ENST00000366959 ATP5J2P56134 94 aa12.01□□□□□ -0.49
RPS6KC1-201ENST00000366959 ATP5G2Q06055 141 aa12.01□□□□□ -0.49
RPS6KC1-201ENST00000366959 FGFBP3Q8TAT2 258 aa12.01□□□□□ -0.49
RPS6KC1-201ENST00000366959 J3QW42 95 aa12□□□□□ -0.49
RPS6KC1-201ENST00000366959 HAX1O00165 279 aa12□□□□□ -0.49
RPS6KC1-201ENST00000366959 PEX7O00628 323 aa12□□□□□ -0.49
RPS6KC1-201ENST00000366959 HOXA5P20719 270 aa12□□□□□ -0.49
RPS6KC1-201ENST00000366959 TNFSF10P50591 281 aa12□□□□□ -0.49
RPS6KC1-201ENST00000366959 FOXG1P55316 489 aaPredicted RBP12□□□□□ -0.49
RPS6KC1-201ENST00000366959 RPS20P60866 119 aaKnown RBP12□□□□□ -0.49
RPS6KC1-201ENST00000366959 ZNF56Q15929 161 aa12□□□□□ -0.49
RPS6KC1-201ENST00000366959 TBR1Q16650 682 aa12□□□□□ -0.49
RPS6KC1-201ENST00000366959 SYT8Q8NBV8 401 aa12□□□□□ -0.49
RPS6KC1-201ENST00000366959 OSR1Q8TAX0 266 aaPredicted RBP12□□□□□ -0.49
RPS6KC1-201ENST00000366959 PMCHL2Q9BQD1 86 aa12□□□□□ -0.49
RPS6KC1-201ENST00000366959 SCN4AP35499 1836 aa12□□□□□ -0.49
RPS6KC1-201ENST00000366959 TRBV6-7A0A0A0MS04 114 aa12□□□□□ -0.49
RPS6KC1-201ENST00000366959 KBTBD11-OT1A0A1B0GTJ5 212 aa12□□□□□ -0.49
RPS6KC1-201ENST00000366959 NAPSAO96009 420 aa12□□□□□ -0.49
RPS6KC1-201ENST00000366959 TMPRSS3P57727 454 aa12□□□□□ -0.49
RPS6KC1-201ENST00000366959 WDR82Q6UXN9 313 aa12□□□□□ -0.49
RPS6KC1-201ENST00000366959 C9orf106Q8NAJ2 232 aa12□□□□□ -0.49
RPS6KC1-201ENST00000366959 OR52E5Q8NH55 327 aa12□□□□□ -0.49
RPS6KC1-201ENST00000366959 LCTP09848 1927 aa12□□□□□ -0.49
RPS6KC1-201ENST00000366959 APOHP02749 345 aaPredicted RBP12□□□□□ -0.49
RPS6KC1-201ENST00000366959 RNASE1P07998 156 aaKnown RBP12□□□□□ -0.49
RPS6KC1-201ENST00000366959 COX6CP09669 75 aa12□□□□□ -0.49
RPS6KC1-201ENST00000366959 GCSAMLQ5JQS6 135 aa12□□□□□ -0.49
RPS6KC1-201ENST00000366959 ZNF414Q96IQ9 312 aa12□□□□□ -0.49
RPS6KC1-201ENST00000366959 PCP4P48539 62 aa12□□□□□ -0.49
RPS6KC1-201ENST00000366959 CFHR1Q03591 330 aa12□□□□□ -0.49
RPS6KC1-201ENST00000366959 FAM106AQ4KMX7 169 aa12□□□□□ -0.49
RPS6KC1-201ENST00000366959 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.99□□□□□ -0.492e-6■■■■□ 23.8
RPS6KC1-201ENST00000366959 BSPH1Q075Z2 132 aa11.99□□□□□ -0.49
RPS6KC1-201ENST00000366959 DMRTA1Q5VZB9 504 aa11.99□□□□□ -0.49
RPS6KC1-201ENST00000366959 LEMD1Q68G75 181 aa11.99□□□□□ -0.49
RPS6KC1-201ENST00000366959 WFDC1Q9HC57 220 aa11.99□□□□□ -0.49
RPS6KC1-201ENST00000366959 NYNRINQ9P2P1 1898 aaKnown RBP11.99□□□□□ -0.49
RPS6KC1-201ENST00000366959 C18orf12Q96KH6 178 aa11.99□□□□□ -0.49
RPS6KC1-201ENST00000366959 BDP1A6H8Y1 2624 aa11.99□□□□□ -0.49
RPS6KC1-201ENST00000366959 LGALS3P17931 250 aaKnown RBP11.99□□□□□ -0.49
RPS6KC1-201ENST00000366959 SSBP4Q9BWG4 385 aaPredicted RBP11.99□□□□□ -0.49
RPS6KC1-201ENST00000366959 SERF1AO75920 110 aa11.99□□□□□ -0.49
RPS6KC1-201ENST00000366959 IGKV1D-33P01593 117 aa11.99□□□□□ -0.49
RPS6KC1-201ENST00000366959 IGKV1-33P01594 117 aa11.99□□□□□ -0.49
RPS6KC1-201ENST00000366959 IGLV3-19P01714 112 aa11.99□□□□□ -0.49
RPS6KC1-201ENST00000366959 CD24P25063 80 aa11.99□□□□□ -0.49
RPS6KC1-201ENST00000366959 PRELID3AQ96N28 172 aa11.99□□□□□ -0.49
RPS6KC1-201ENST00000366959 RRN3P1Q2M238 152 aa11.98□□□□□ -0.49
RPS6KC1-201ENST00000366959 GNG5P63218 68 aa11.98□□□□□ -0.49
RPS6KC1-201ENST00000366959 ABHD17AQ96GS6 310 aa11.98□□□□□ -0.49
RPS6KC1-201ENST00000366959 EFNA2O43921 213 aa11.98□□□□□ -0.49
RPS6KC1-201ENST00000366959 TEX45Q8NA69 505 aa11.98□□□□□ -0.49
RPS6KC1-201ENST00000366959 VSIRQ9H7M9 311 aa11.98□□□□□ -0.49
RPS6KC1-201ENST00000366959 IGKV1-12A0A0C4DH73 117 aa11.98□□□□□ -0.49
RPS6KC1-201ENST00000366959 A1L4Q6 167 aa11.98□□□□□ -0.49
RPS6KC1-201ENST00000366959 PINLYPA6NC86 204 aa11.98□□□□□ -0.49
RPS6KC1-201ENST00000366959 B9A039 149 aa11.98□□□□□ -0.49
RPS6KC1-201ENST00000366959 IGKV1D-12P01611 117 aa11.98□□□□□ -0.49
RPS6KC1-201ENST00000366959 GPR183P32249 361 aa11.98□□□□□ -0.49
RPS6KC1-201ENST00000366959 PSMB11A5LHX3 300 aa11.97□□□□□ -0.49
RPS6KC1-201ENST00000366959 LHX2P50458 406 aa11.97□□□□□ -0.49
RPS6KC1-201ENST00000366959 C5orf24Q7Z6I8 188 aa11.97□□□□□ -0.49
RPS6KC1-201ENST00000366959 FAM131CQ96AQ9 280 aa11.97□□□□□ -0.49
RPS6KC1-201ENST00000366959 DPM3Q9P2X0 92 aa11.97□□□□□ -0.49
RPS6KC1-201ENST00000366959 PHF3Q92576 2039 aaKnown RBP11.97□□□□□ -0.49
RPS6KC1-201ENST00000366959 PATJQ8NI35 1801 aa11.97□□□□□ -0.49
RPS6KC1-201ENST00000366959 OR11H12B2RN74 326 aa11.97□□□□□ -0.49
RPS6KC1-201ENST00000366959 SAPCD1Q5SSQ6 148 aa11.97□□□□□ -0.49
RPS6KC1-201ENST00000366959 TMEM170BQ5T4T1 132 aa11.97□□□□□ -0.49
RPS6KC1-201ENST00000366959 OR11H1Q8NG94 326 aa11.97□□□□□ -0.49
RPS6KC1-201ENST00000366959 OR11H2Q8NH07 326 aa11.97□□□□□ -0.49
RPS6KC1-201ENST00000366959 A0A1B0GUT8 65 aa11.97□□□□□ -0.49
RPS6KC1-201ENST00000366959 HIGD1CA8MV81 97 aa11.97□□□□□ -0.49
RPS6KC1-201ENST00000366959 FAM89BQ8N5H3 189 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms