RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 WDR25Q64LD2 544 aaPredicted RBP15.52■□□□□ 0.08
CLIP2-202ENST00000361545 ZNF497Q6ZNH5 498 aa15.52■□□□□ 0.08
CLIP2-202ENST00000361545 YPEL2Q96QA6 119 aa15.52■□□□□ 0.08
CLIP2-202ENST00000361545 ZNF324O75467 553 aaPredicted RBP15.52■□□□□ 0.07
CLIP2-202ENST00000361545 VDAC2P45880 294 aaPredicted RBP15.52■□□□□ 0.07
CLIP2-202ENST00000361545 Q6ZS92 163 aa15.52■□□□□ 0.07
CLIP2-202ENST00000361545 NABP1Q96AH0 204 aa15.52■□□□□ 0.07
CLIP2-202ENST00000361545 ZSWIM8A7E2V4 1837 aa15.52■□□□□ 0.07
CLIP2-202ENST00000361545 MPTX1A8MV57 137 aa15.52■□□□□ 0.07
CLIP2-202ENST00000361545 LBHQ53QV2 105 aaPredicted RBP15.52■□□□□ 0.07
CLIP2-202ENST00000361545 NBEAP1P0C6P0 100 aa15.51■□□□□ 0.07
CLIP2-202ENST00000361545 VN1R17PQ8TDU5 208 aa15.51■□□□□ 0.07
CLIP2-202ENST00000361545 GPR82Q96P67 336 aa15.51■□□□□ 0.07
CLIP2-202ENST00000361545 DANCRP0C864 163 aa15.51■□□□□ 0.07
CLIP2-202ENST00000361545 SDHCQ99643 169 aaPredicted RBP15.51■□□□□ 0.07
CLIP2-202ENST00000361545 PRSS22Q9GZN4 317 aa15.51■□□□□ 0.07
CLIP2-202ENST00000361545 RPRMQ9NS64 109 aa15.51■□□□□ 0.07
CLIP2-202ENST00000361545 TCF20Q9UGU0 1960 aaKnown RBP15.51■□□□□ 0.07
CLIP2-202ENST00000361545 LOC102724200A0A096LPH7 203 aaPredicted RBP15.51■□□□□ 0.07
CLIP2-202ENST00000361545 GCGP01275 180 aa15.51■□□□□ 0.07
CLIP2-202ENST00000361545 RLFQ13129 1914 aa15.51■□□□□ 0.07
CLIP2-202ENST00000361545 RPS20P60866 119 aaKnown RBP15.51■□□□□ 0.07
CLIP2-202ENST00000361545 C2orf68Q2NKX9 166 aa15.51■□□□□ 0.07
CLIP2-202ENST00000361545 LINC00527Q9UJ94 153 aa15.51■□□□□ 0.07
CLIP2-202ENST00000361545 C5orf52A6NGY3 159 aa15.5■□□□□ 0.07
CLIP2-202ENST00000361545 TIMM23O14925 209 aa15.5■□□□□ 0.07
CLIP2-202ENST00000361545 RPLP1P05386 114 aaKnown RBP15.5■□□□□ 0.07
CLIP2-202ENST00000361545 EFNA4P52798 201 aa15.5■□□□□ 0.07
CLIP2-202ENST00000361545 SLC25A15Q9Y619 301 aa15.5■□□□□ 0.07
CLIP2-202ENST00000361545 MIEN1Q9BRT3 115 aa15.5■□□□□ 0.07
CLIP2-202ENST00000361545 PARLQ9H300 379 aa15.5■□□□□ 0.07
CLIP2-202ENST00000361545 KLK15Q9H2R5 256 aa15.5■□□□□ 0.07
CLIP2-202ENST00000361545 NUDT3O95989 172 aa15.49■□□□□ 0.07
CLIP2-202ENST00000361545 CGAP01215 116 aa15.49■□□□□ 0.07
CLIP2-202ENST00000361545 PRR30Q53SZ7 412 aaPredicted RBP15.49■□□□□ 0.07
CLIP2-202ENST00000361545 ZNF385CQ66K41 422 aaPredicted RBP15.49■□□□□ 0.07
CLIP2-202ENST00000361545 TEX45Q8NA69 505 aa15.49■□□□□ 0.07
CLIP2-202ENST00000361545 NMUP48645 174 aa15.49■□□□□ 0.07
CLIP2-202ENST00000361545 ZP1P60852 638 aa15.49■□□□□ 0.07
CLIP2-202ENST00000361545 HERPUD1Q15011 391 aa15.49■□□□□ 0.07
CLIP2-202ENST00000361545 GTF3AQ92664 365 aaKnown RBP15.49■□□□□ 0.07
CLIP2-202ENST00000361545 RAMP3O60896 148 aa15.49■□□□□ 0.07
CLIP2-202ENST00000361545 CEACAM4O75871 244 aa15.49■□□□□ 0.07
CLIP2-202ENST00000361545 RPL24P83731 157 aaKnown RBP15.49■□□□□ 0.07
CLIP2-202ENST00000361545 FNDC1Q4ZHG4 1894 aaPredicted RBP15.49■□□□□ 0.07
CLIP2-202ENST00000361545 GAS1P54826 345 aa15.48■□□□□ 0.07
CLIP2-202ENST00000361545 ST6GALNAC3Q8NDV1 305 aa15.48■□□□□ 0.07
CLIP2-202ENST00000361545 RCC1LQ96I51 464 aaKnown RBP15.48■□□□□ 0.07
CLIP2-202ENST00000361545 PSMG3Q9BT73 122 aaPredicted RBP15.48■□□□□ 0.07
CLIP2-202ENST00000361545 FREM3P0C091 2139 aa15.48■□□□□ 0.07
CLIP2-202ENST00000361545 IGKV1-12A0A0C4DH73 117 aa15.48■□□□□ 0.07
CLIP2-202ENST00000361545 UPK2O00526 184 aa15.48■□□□□ 0.07
CLIP2-202ENST00000361545 IGKV1D-12P01611 117 aa15.48■□□□□ 0.07
CLIP2-202ENST00000361545 MT-ND6P03923 174 aa15.48■□□□□ 0.07
CLIP2-202ENST00000361545 CENPWQ5EE01 88 aa15.48■□□□□ 0.07
CLIP2-202ENST00000361545 LINC00518Q8N0U6 118 aa15.48■□□□□ 0.07
CLIP2-202ENST00000361545 JMJD8Q96S16 334 aa15.48■□□□□ 0.07
CLIP2-202ENST00000361545 PAM16Q9Y3D7 125 aa15.48■□□□□ 0.07
CLIP2-202ENST00000361545 CIDEAO60543 219 aa15.48■□□□□ 0.07
CLIP2-202ENST00000361545 PUSL1Q8N0Z8 303 aaKnown RBP15.48■□□□□ 0.07
CLIP2-202ENST00000361545 PKDREJQ9NTG1 2253 aa15.48■□□□□ 0.07
CLIP2-202ENST00000361545 TRGC2P03986 189 aa15.48■□□□□ 0.07
CLIP2-202ENST00000361545 EMP1P54849 157 aa15.48■□□□□ 0.07
CLIP2-202ENST00000361545 IFITM10A6NMD0 228 aa15.47■□□□□ 0.07
CLIP2-202ENST00000361545 AGAP20933 346 aa15.47■□□□□ 0.07
CLIP2-202ENST00000361545 KIAA1644Q3SXP7 199 aa15.47■□□□□ 0.07
CLIP2-202ENST00000361545 SAPCD1Q5SSQ6 148 aa15.47■□□□□ 0.07
CLIP2-202ENST00000361545 CD8AP01732 235 aa15.47■□□□□ 0.07
CLIP2-202ENST00000361545 SLC25A28Q96A46 364 aa15.47■□□□□ 0.07
CLIP2-202ENST00000361545 TCF21O43680 179 aa15.47■□□□□ 0.07
CLIP2-202ENST00000361545 OR52E5Q8NH55 327 aa15.47■□□□□ 0.07
CLIP2-202ENST00000361545 HLA-DQA1P01909 254 aa15.46■□□□□ 0.07
CLIP2-202ENST00000361545 MAP1LC3AQ9H492 121 aa15.46■□□□□ 0.07
CLIP2-202ENST00000361545 SRRM5B3KS81 715 aa15.46■□□□□ 0.07
CLIP2-202ENST00000361545 DIRC3C9JPN6 131 aa15.46■□□□□ 0.07
CLIP2-202ENST00000361545 MBD3L4A6NDZ8 208 aaPredicted RBP15.46■□□□□ 0.07
CLIP2-202ENST00000361545 MBD3L3A6NE82 208 aaPredicted RBP15.46■□□□□ 0.07
CLIP2-202ENST00000361545 MBD3L5A6NJ08 208 aaPredicted RBP15.46■□□□□ 0.07
CLIP2-202ENST00000361545 M0R381 172 aa15.46■□□□□ 0.07
CLIP2-202ENST00000361545 LY6HO94772 140 aa15.46■□□□□ 0.07
CLIP2-202ENST00000361545 HLA-DRB1P01911 266 aa15.46■□□□□ 0.07
CLIP2-202ENST00000361545 TRGC1P0CF51 173 aa15.46■□□□□ 0.07
CLIP2-202ENST00000361545 MBD3L2Q8NHZ7 208 aaPredicted RBP15.46■□□□□ 0.07
CLIP2-202ENST00000361545 GGACTQ9BVM4 153 aa15.46■□□□□ 0.07
CLIP2-202ENST00000361545 MRPL18Q9H0U6 180 aaKnown RBP15.46■□□□□ 0.07
CLIP2-202ENST00000361545 RNASEH2CQ8TDP1 164 aaKnown RBP15.46■□□□□ 0.07
CLIP2-202ENST00000361545 DPH3Q96FX2 82 aa15.46■□□□□ 0.06
CLIP2-202ENST00000361545 MUC21A0A0G2JKD1 596 aa15.45■□□□□ 0.06
CLIP2-202ENST00000361545 MUC21A0A140T8X8 626 aa15.45■□□□□ 0.06
CLIP2-202ENST00000361545 TMEM262E9PQX1 116 aa15.45■□□□□ 0.06
CLIP2-202ENST00000361545 J3QRE1 110 aa15.45■□□□□ 0.06
CLIP2-202ENST00000361545 CA7P43166 264 aa15.45■□□□□ 0.06
CLIP2-202ENST00000361545 RHOGP84095 191 aa15.45■□□□□ 0.06
CLIP2-202ENST00000361545 MUC21Q5SSG8 566 aa15.45■□□□□ 0.06
CLIP2-202ENST00000361545 PEMTQ9UBM1 199 aa15.45■□□□□ 0.06
CLIP2-202ENST00000361545 A0A0A6YYD4 124 aa15.45■□□□□ 0.06
CLIP2-202ENST00000361545 K7ENP7 123 aa15.45■□□□□ 0.06
CLIP2-202ENST00000361545 KLRD1Q13241 179 aa15.45■□□□□ 0.06
CLIP2-202ENST00000361545 DUX3Q96PT4 197 aa15.45■□□□□ 0.06
CLIP2-202ENST00000361545 ZFP30Q9Y2G7 519 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms