RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 OR52E5Q8NH55 327 aa11.23□□□□□ -0.61
LDB3-202ENST00000361373 IGFBP2P18065 325 aa11.23□□□□□ -0.61
LDB3-202ENST00000361373 ARTNQ5T4W7 220 aa11.23□□□□□ -0.61
LDB3-202ENST00000361373 TMEM178BH3BS89 294 aa11.23□□□□□ -0.61
LDB3-202ENST00000361373 H7C1H1 209 aa11.23□□□□□ -0.61
LDB3-202ENST00000361373 ETV2O00321 342 aaPredicted RBP11.23□□□□□ -0.61
LDB3-202ENST00000361373 WDR25Q64LD2 544 aaPredicted RBP11.23□□□□□ -0.61
LDB3-202ENST00000361373 TMEM42Q69YG0 159 aa11.23□□□□□ -0.61
LDB3-202ENST00000361373 ZNF324BQ6AW86 544 aaPredicted RBP11.23□□□□□ -0.61
LDB3-202ENST00000361373 CACNA1BQ00975 2339 aa11.23□□□□□ -0.61
LDB3-202ENST00000361373 IGKV1D-13A0A0B4J2D9 117 aa11.22□□□□□ -0.61
LDB3-202ENST00000361373 IGHV3-35A0A0C4DH35 117 aa11.22□□□□□ -0.61
LDB3-202ENST00000361373 IGKV1-13P0DP09 117 aa11.22□□□□□ -0.61
LDB3-202ENST00000361373 ZCCHC24Q8N2G6 241 aaKnown RBP11.22□□□□□ -0.61
LDB3-202ENST00000361373 LRTM2Q8N967 370 aa11.22□□□□□ -0.61
LDB3-202ENST00000361373 LHFPL5Q8TAF8 219 aa11.22□□□□□ -0.61
LDB3-202ENST00000361373 Q5BKY6 102 aa11.22□□□□□ -0.61
LDB3-202ENST00000361373 COL25A1Q9BXS0 654 aaPredicted RBP11.22□□□□□ -0.61
LDB3-202ENST00000361373 B4DSR2 109 aa11.22□□□□□ -0.61
LDB3-202ENST00000361373 WNT2P09544 360 aa11.22□□□□□ -0.61
LDB3-202ENST00000361373 PRCDQ00LT1 54 aa11.22□□□□□ -0.61
LDB3-202ENST00000361373 ZNF525Q8N782 197 aa11.22□□□□□ -0.61
LDB3-202ENST00000361373 PGLYRP4Q96LB8 373 aa11.22□□□□□ -0.61
LDB3-202ENST00000361373 GNLYP22749 145 aa11.22□□□□□ -0.61
LDB3-202ENST00000361373 OTX1P32242 354 aaPredicted RBP11.22□□□□□ -0.61
LDB3-202ENST00000361373 VDAC2P45880 294 aaPredicted RBP11.22□□□□□ -0.61
LDB3-202ENST00000361373 C2orf83Q53S99 150 aa11.22□□□□□ -0.61
LDB3-202ENST00000361373 ZNF841Q6ZN19 808 aa11.22□□□□□ -0.61
LDB3-202ENST00000361373 ZNF600Q6ZNG1 722 aa11.22□□□□□ -0.61
LDB3-202ENST00000361373 SLC50A1Q9BRV3 221 aa11.22□□□□□ -0.61
LDB3-202ENST00000361373 IGKV1-12A0A0C4DH73 117 aa11.22□□□□□ -0.61
LDB3-202ENST00000361373 IGKV1D-12P01611 117 aa11.22□□□□□ -0.61
LDB3-202ENST00000361373 MARVELD3Q96A59 401 aa11.22□□□□□ -0.61
LDB3-202ENST00000361373 FOXI3A8MTJ6 420 aaPredicted RBP11.21□□□□□ -0.61
LDB3-202ENST00000361373 OR9G9P0C7N8 305 aa11.21□□□□□ -0.61
LDB3-202ENST00000361373 CENPWQ5EE01 88 aa11.21□□□□□ -0.61
LDB3-202ENST00000361373 Q6AWC8 147 aa11.21□□□□□ -0.61
LDB3-202ENST00000361373 SFRP2Q96HF1 295 aa11.21□□□□□ -0.61
LDB3-202ENST00000361373 KIR2DL4Q99706 377 aa11.21□□□□□ -0.61
LDB3-202ENST00000361373 A6NDN8 102 aa11.21□□□□□ -0.61
LDB3-202ENST00000361373 FAM181BA6NEQ2 426 aa11.21□□□□□ -0.61
LDB3-202ENST00000361373 TAS2R60P59551 318 aa11.21□□□□□ -0.61
LDB3-202ENST00000361373 CLEC19AQ6UXS0 136 aa11.21□□□□□ -0.61
LDB3-202ENST00000361373 MIEN1Q9BRT3 115 aa11.21□□□□□ -0.61
LDB3-202ENST00000361373 ZNF257Q9Y2Q1 563 aa11.21□□□□□ -0.61
LDB3-202ENST00000361373 HLA-DRB1P01911 266 aa11.21□□□□□ -0.62
LDB3-202ENST00000361373 NBL1P41271 181 aa11.21□□□□□ -0.62
LDB3-202ENST00000361373 ID3Q02535 119 aa11.21□□□□□ -0.62
LDB3-202ENST00000361373 TMEM70Q9BUB7 260 aa11.21□□□□□ -0.62
LDB3-202ENST00000361373 TUBA4BQ9H853 241 aa11.21□□□□□ -0.62
LDB3-202ENST00000361373 PNRC2Q9NPJ4 139 aaKnown RBP11.21□□□□□ -0.62
LDB3-202ENST00000361373 LOC389332A0A1B0GUA5 103 aa11.21□□□□□ -0.62
LDB3-202ENST00000361373 IFITM10A6NMD0 228 aa11.21□□□□□ -0.62
LDB3-202ENST00000361373 M0R1W7 72 aa11.21□□□□□ -0.62
LDB3-202ENST00000361373 GGCTO75223 188 aaKnown RBP11.21□□□□□ -0.62
LDB3-202ENST00000361373 RARRES2Q99969 163 aa11.21□□□□□ -0.62
LDB3-202ENST00000361373 SOX21Q9Y651 276 aaPredicted RBP11.21□□□□□ -0.62
LDB3-202ENST00000361373 COL6A6A6NMZ7 2263 aa11.21□□□□□ -0.62
LDB3-202ENST00000361373 TRBV6-6A0A0A6YYG2 114 aa11.2□□□□□ -0.62
LDB3-202ENST00000361373 TRAV34A0A0B4J273 112 aa11.2□□□□□ -0.62
LDB3-202ENST00000361373 DIRC3C9JPN6 131 aa11.2□□□□□ -0.62
LDB3-202ENST00000361373 LYNX1G3V0Z9 82 aa11.2□□□□□ -0.62
LDB3-202ENST00000361373 LYNX1P0DP58 116 aa11.2□□□□□ -0.62
LDB3-202ENST00000361373 BTF3P20290 206 aaKnown RBP11.2□□□□□ -0.62
LDB3-202ENST00000361373 CD69Q07108 199 aa11.2□□□□□ -0.62
LDB3-202ENST00000361373 FMC1Q96HJ9 113 aa11.2□□□□□ -0.62
LDB3-202ENST00000361373 A0A1B0GW15 77 aa11.2□□□□□ -0.62
LDB3-202ENST00000361373 TIMM23O14925 209 aa11.2□□□□□ -0.62
LDB3-202ENST00000361373 PAX1P15863 534 aa11.2□□□□□ -0.62
LDB3-202ENST00000361373 C3orf36Q3SXR2 165 aa11.2□□□□□ -0.62
LDB3-202ENST00000361373 LBHQ53QV2 105 aaPredicted RBP11.2□□□□□ -0.62
LDB3-202ENST00000361373 CIARTQ8N365 385 aaPredicted RBP11.2□□□□□ -0.62
LDB3-202ENST00000361373 MRPL18Q9H0U6 180 aaKnown RBP11.2□□□□□ -0.62
LDB3-202ENST00000361373 M0R3E3 92 aa11.2□□□□□ -0.62
LDB3-202ENST00000361373 PEX7O00628 323 aa11.2□□□□□ -0.62
LDB3-202ENST00000361373 CEACAM4O75871 244 aa11.2□□□□□ -0.62
LDB3-202ENST00000361373 PMCHL1Q16048 86 aa11.2□□□□□ -0.62
LDB3-202ENST00000361373 PSMB2P49721 201 aa11.2□□□□□ -0.62
LDB3-202ENST00000361373 H3BTX0 84 aa11.19□□□□□ -0.62
LDB3-202ENST00000361373 F12P00748 615 aaPredicted RBP11.19□□□□□ -0.62
LDB3-202ENST00000361373 SLC25A16P16260 332 aa11.19□□□□□ -0.62
LDB3-202ENST00000361373 LY6G6EA0A0G2JKS1 128 aa11.19□□□□□ -0.62
LDB3-202ENST00000361373 IGKV3-15P01624 115 aa11.19□□□□□ -0.62
LDB3-202ENST00000361373 OR4C5Q8NGB2 326 aa11.19□□□□□ -0.62
LDB3-202ENST00000361373 MOB4Q9Y3A3 225 aa11.19□□□□□ -0.62
LDB3-202ENST00000361373 U3KQA8 63 aa11.19□□□□□ -0.62
LDB3-202ENST00000361373 TCF20Q9UGU0 1960 aaKnown RBP11.19□□□□□ -0.62
LDB3-202ENST00000361373 LDLRAD4O15165 306 aa11.19□□□□□ -0.62
LDB3-202ENST00000361373 NUDT3O95989 172 aa11.19□□□□□ -0.62
LDB3-202ENST00000361373 ASIPP42127 132 aa11.19□□□□□ -0.62
LDB3-202ENST00000361373 HBBP68871 147 aa11.19□□□□□ -0.62
LDB3-202ENST00000361373 LEPROTL1O95214 131 aa11.19□□□□□ -0.62
LDB3-202ENST00000361373 IGHV1-8P0DP01 117 aa11.19□□□□□ -0.62
LDB3-202ENST00000361373 OR1N2Q8NGR9 330 aa11.19□□□□□ -0.62
LDB3-202ENST00000361373 SNRNP200O75643 2136 aaKnown RBP11.18□□□□□ -0.62
LDB3-202ENST00000361373 IGHV2-26A0A0B4J1V2 119 aa11.18□□□□□ -0.62
LDB3-202ENST00000361373 NAPSAO96009 420 aa11.18□□□□□ -0.62
LDB3-202ENST00000361373 FHITP49789 147 aa11.18□□□□□ -0.62
LDB3-202ENST00000361373 TFF3Q07654 80 aa11.18□□□□□ -0.62
LDB3-202ENST00000361373 OR10AG1Q8NH19 301 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms