RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 FAM90A20PA6NIJ5 464 aa16.99■□□□□ 0.31
CDC42BPB-201ENST00000361246 FAM90A8PA6NJQ4 464 aa16.99■□□□□ 0.31
CDC42BPB-201ENST00000361246 FAM90A7PA6NKC0 464 aa16.99■□□□□ 0.31
CDC42BPB-201ENST00000361246 FAM90A22PA8MWA6 464 aa16.99■□□□□ 0.31
CDC42BPB-201ENST00000361246 FAM90A12PA8MX19 464 aa16.99■□□□□ 0.31
CDC42BPB-201ENST00000361246 FAM90A5PA8MXJ8 464 aa16.99■□□□□ 0.31
CDC42BPB-201ENST00000361246 FAM90A23PA8MXZ1 464 aa16.99■□□□□ 0.31
CDC42BPB-201ENST00000361246 FAM90A15PP0C7V4 464 aa16.99■□□□□ 0.31
CDC42BPB-201ENST00000361246 FAM90A13PP0C7W8 464 aa16.99■□□□□ 0.31
CDC42BPB-201ENST00000361246 FAM90A14PP0C7W9 464 aa16.99■□□□□ 0.31
CDC42BPB-201ENST00000361246 FAM90A24PP0C7X0 464 aa16.99■□□□□ 0.31
CDC42BPB-201ENST00000361246 SPATA45Q537H7 98 aa16.99■□□□□ 0.31
CDC42BPB-201ENST00000361246 TUBD1Q9UJT1 453 aa16.99■□□□□ 0.31
CDC42BPB-201ENST00000361246 SDK2Q58EX2 2172 aa16.99■□□□□ 0.31
CDC42BPB-201ENST00000361246 HEATR1Q9H583 2144 aaKnown RBP16.99■□□□□ 0.31
CDC42BPB-201ENST00000361246 ZNF525Q8N782 197 aa16.99■□□□□ 0.31
CDC42BPB-201ENST00000361246 SOX21Q9Y651 276 aaPredicted RBP16.99■□□□□ 0.31
CDC42BPB-201ENST00000361246 SIPA1L1O43166 1804 aa16.99■□□□□ 0.31
CDC42BPB-201ENST00000361246 IGLV3-19P01714 112 aa16.99■□□□□ 0.31
CDC42BPB-201ENST00000361246 TRGC2P03986 189 aa16.99■□□□□ 0.31
CDC42BPB-201ENST00000361246 ZP1P60852 638 aa16.99■□□□□ 0.31
CDC42BPB-201ENST00000361246 MLNRO43193 412 aa16.99■□□□□ 0.31
CDC42BPB-201ENST00000361246 IGHV3-53P01767 116 aa16.99■□□□□ 0.31
CDC42BPB-201ENST00000361246 GCHFRP30047 84 aa16.99■□□□□ 0.31
CDC42BPB-201ENST00000361246 CRIM1Q9NZV1 1036 aa16.99■□□□□ 0.31
CDC42BPB-201ENST00000361246 POLEQ07864 2286 aa16.99■□□□□ 0.31
CDC42BPB-201ENST00000361246 M0R143 59 aa16.98■□□□□ 0.31
CDC42BPB-201ENST00000361246 IGHV1-46P01743 117 aa16.98■□□□□ 0.31
CDC42BPB-201ENST00000361246 FOXA3P55318 350 aaPredicted RBP16.98■□□□□ 0.31
CDC42BPB-201ENST00000361246 IL17RELQ6ZVW7 336 aa16.98■□□□□ 0.31
CDC42BPB-201ENST00000361246 IFI27L2Q9H2X8 130 aa16.98■□□□□ 0.31
CDC42BPB-201ENST00000361246 SDF2L1Q9HCN8 221 aa16.98■□□□□ 0.31
CDC42BPB-201ENST00000361246 A0A087X0M5 115 aa16.98■□□□□ 0.31
CDC42BPB-201ENST00000361246 A0A1B0GX30 115 aa16.98■□□□□ 0.31
CDC42BPB-201ENST00000361246 C7orf66A4D0T2 115 aa16.98■□□□□ 0.31
CDC42BPB-201ENST00000361246 A6NDN8 102 aa16.98■□□□□ 0.31
CDC42BPB-201ENST00000361246 PRR32B1ATL7 298 aa16.98■□□□□ 0.31
CDC42BPB-201ENST00000361246 RAMP3O60896 148 aa16.98■□□□□ 0.31
CDC42BPB-201ENST00000361246 AQP10Q96PS8 301 aa16.98■□□□□ 0.31
CDC42BPB-201ENST00000361246 HINT1P49773 126 aaPredicted RBP16.98■□□□□ 0.31
CDC42BPB-201ENST00000361246 SPSB4Q96A44 273 aa16.98■□□□□ 0.31
CDC42BPB-201ENST00000361246 TRAV14DV4A0A0A6YYC5 116 aa16.97■□□□□ 0.31
CDC42BPB-201ENST00000361246 MEF2BQ02080 365 aaPredicted RBP16.97■□□□□ 0.31
CDC42BPB-201ENST00000361246 C1QTNF5Q9BXJ0 243 aa16.97■□□□□ 0.31
CDC42BPB-201ENST00000361246 LINC00312Q9Y6C7 94 aa16.97■□□□□ 0.31
CDC42BPB-201ENST00000361246 FAM74A7A6NL05 159 aa16.97■□□□□ 0.31
CDC42BPB-201ENST00000361246 NDUFA3O95167 84 aa16.97■□□□□ 0.31
CDC42BPB-201ENST00000361246 NBEAP1P0C6P0 100 aa16.97■□□□□ 0.31
CDC42BPB-201ENST00000361246 RAB9AP51151 201 aa16.97■□□□□ 0.31
CDC42BPB-201ENST00000361246 RPRMQ9NS64 109 aa16.97■□□□□ 0.31
CDC42BPB-201ENST00000361246 NPIPB4C9JG80 1138 aa16.97■□□□□ 0.31
CDC42BPB-201ENST00000361246 ELOA3CA0A087WX78 387 aaPredicted RBP16.97■□□□□ 0.31
CDC42BPB-201ENST00000361246 WNT2P09544 360 aa16.97■□□□□ 0.31
CDC42BPB-201ENST00000361246 RPS20P60866 119 aaKnown RBP16.97■□□□□ 0.31
CDC42BPB-201ENST00000361246 GREB1LQ9C091 1923 aaPredicted RBP16.97■□□□□ 0.31
CDC42BPB-201ENST00000361246 MYO7BQ6PIF6 2116 aa16.97■□□□□ 0.31
CDC42BPB-201ENST00000361246 OR9G4Q8NGQ1 327 aa16.97■□□□□ 0.31
CDC42BPB-201ENST00000361246 PGPEP1Q9NXJ5 209 aa16.97■□□□□ 0.31
CDC42BPB-201ENST00000361246 PSMG4Q5JS54 123 aa16.96■□□□□ 0.31
CDC42BPB-201ENST00000361246 MIR17HGQ75NE6 70 aa16.96■□□□□ 0.31
CDC42BPB-201ENST00000361246 TRAF4Q9BUZ4 470 aaPredicted RBP16.96■□□□□ 0.31
CDC42BPB-201ENST00000361246 RBM38Q9H0Z9 239 aaKnown RBP16.96■□□□□ 0.31
CDC42BPB-201ENST00000361246 TMEM133Q9H2Q1 129 aa16.96■□□□□ 0.31
CDC42BPB-201ENST00000361246 A0A087WV48 116 aa16.96■□□□□ 0.31
CDC42BPB-201ENST00000361246 ASCL4Q6XD76 172 aa16.96■□□□□ 0.31
CDC42BPB-201ENST00000361246 C1orf100Q5SVJ3 147 aa16.96■□□□□ 0.31
CDC42BPB-201ENST00000361246 C2orf88Q9BSF0 95 aa16.96■□□□□ 0.31
CDC42BPB-201ENST00000361246 SLC17A3O00476 420 aa16.96■□□□□ 0.31
CDC42BPB-201ENST00000361246 PEX7O00628 323 aa16.96■□□□□ 0.31
CDC42BPB-201ENST00000361246 CFAP161Q6P656 301 aa16.96■□□□□ 0.31
CDC42BPB-201ENST00000361246 Q96MF0 132 aa16.96■□□□□ 0.31
CDC42BPB-201ENST00000361246 SCO2A0A1W2PP80 73 aa16.96■□□□□ 0.3
CDC42BPB-201ENST00000361246 SNAI2O43623 268 aa16.96■□□□□ 0.3
CDC42BPB-201ENST00000361246 LEPROTL1O95214 131 aa16.96■□□□□ 0.3
CDC42BPB-201ENST00000361246 LCNL1Q6ZST4 164 aa16.96■□□□□ 0.3
CDC42BPB-201ENST00000361246 TMEM70Q9BUB7 260 aa16.96■□□□□ 0.3
CDC42BPB-201ENST00000361246 PRR31Q5SQ13 230 aa16.95■□□□□ 0.3
CDC42BPB-201ENST00000361246 NDPQ00604 133 aa16.95■□□□□ 0.3
CDC42BPB-201ENST00000361246 AHCTF1Q8WYP5 2266 aa16.95■□□□□ 0.3
CDC42BPB-201ENST00000361246 TICRRQ7Z2Z1 1910 aa16.95■□□□□ 0.3
CDC42BPB-201ENST00000361246 MPTX1A8MV57 137 aa16.95■□□□□ 0.3
CDC42BPB-201ENST00000361246 CRPP02741 224 aa16.95■□□□□ 0.3
CDC42BPB-201ENST00000361246 A0A1B0GV72 72 aa16.95■□□□□ 0.3
CDC42BPB-201ENST00000361246 C12orf54Q6X4T0 127 aa16.95■□□□□ 0.3
CDC42BPB-201ENST00000361246 PSCAO43653 123 aa16.94■□□□□ 0.3
CDC42BPB-201ENST00000361246 KLHL30-AS1Q8NEE0 82 aa16.94■□□□□ 0.3
CDC42BPB-201ENST00000361246 TMEM42Q69YG0 159 aa16.94■□□□□ 0.3
CDC42BPB-201ENST00000361246 OR10W1Q8NGF6 305 aa16.94■□□□□ 0.3
CDC42BPB-201ENST00000361246 LYZL4Q96KX0 146 aa16.94■□□□□ 0.3
CDC42BPB-201ENST00000361246 JKAMPQ9P055 326 aa16.94■□□□□ 0.3
CDC42BPB-201ENST00000361246 H3BUX3 64 aa16.94■□□□□ 0.3
CDC42BPB-201ENST00000361246 UBE2E2Q96LR5 201 aa16.94■□□□□ 0.3
CDC42BPB-201ENST00000361246 Q9H3A6 140 aa16.94■□□□□ 0.3
CDC42BPB-201ENST00000361246 TRAV8-6A0A0B4J262 113 aa16.94■□□□□ 0.3
CDC42BPB-201ENST00000361246 NPIPB9F8W1W9 429 aa16.94■□□□□ 0.3
CDC42BPB-201ENST00000361246 NPIPB7O75200 414 aa16.94■□□□□ 0.3
CDC42BPB-201ENST00000361246 CFDP00746 253 aaPredicted RBP16.94■□□□□ 0.3
CDC42BPB-201ENST00000361246 REC114Q7Z4M0 266 aa16.94■□□□□ 0.3
CDC42BPB-201ENST00000361246 EFNB1P98172 346 aa16.93■□□□□ 0.3
CDC42BPB-201ENST00000361246 SRSF4Q08170 494 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms