RNA–Protein interactions for RNA: ENST00000361125.1

SMURF1-201, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene SMURF1, Length 5,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-201ENST00000361125 REC114Q7Z4M0 266 aa17.63■□□□□ 0.41
SMURF1-201ENST00000361125 KLHDC3Q9BQ90 382 aa17.63■□□□□ 0.41
SMURF1-201ENST00000361125 WNT10AQ9GZT5 417 aa17.63■□□□□ 0.41
SMURF1-201ENST00000361125 TSPOP30536 169 aa17.63■□□□□ 0.41
SMURF1-201ENST00000361125 SCO2A0A1W2PP80 73 aa17.63■□□□□ 0.41
SMURF1-201ENST00000361125 ATP5IP56385 69 aaPredicted RBP17.63■□□□□ 0.41
SMURF1-201ENST00000361125 CD69Q07108 199 aa17.63■□□□□ 0.41
SMURF1-201ENST00000361125 HINT1P49773 126 aaPredicted RBP17.63■□□□□ 0.41
SMURF1-201ENST00000361125 MIR17HGQ75NE6 70 aa17.63■□□□□ 0.41
SMURF1-201ENST00000361125 NBEAP1P0C6P0 100 aa17.62■□□□□ 0.41
SMURF1-201ENST00000361125 REG4Q9BYZ8 158 aa17.62■□□□□ 0.41
SMURF1-201ENST00000361125 A0A1W2PRX2 142 aa17.62■□□□□ 0.41
SMURF1-201ENST00000361125 VENTXO95231 258 aa17.62■□□□□ 0.41
SMURF1-201ENST00000361125 FAM159AQ6UWV7 190 aa17.62■□□□□ 0.41
SMURF1-201ENST00000361125 C21orf62-AS1Q17RA5 79 aa17.62■□□□□ 0.41
SMURF1-201ENST00000361125 FAM89BQ8N5H3 189 aa17.62■□□□□ 0.41
SMURF1-201ENST00000361125 C21orf62Q9NYP8 219 aa17.62■□□□□ 0.41
SMURF1-201ENST00000361125 IGKV3OR2-268A0A0C4DH90 116 aa17.62■□□□□ 0.41
SMURF1-201ENST00000361125 MUC21A0A0G2JKD1 596 aa17.62■□□□□ 0.41
SMURF1-201ENST00000361125 MUC21A0A140T8X8 626 aa17.62■□□□□ 0.41
SMURF1-201ENST00000361125 MUC21Q5SSG8 566 aa17.62■□□□□ 0.41
SMURF1-201ENST00000361125 TUBA4BQ9H853 241 aa17.62■□□□□ 0.41
SMURF1-201ENST00000361125 C9JCJ5 164 aa17.61■□□□□ 0.41
SMURF1-201ENST00000361125 IGHV3-11P01762 117 aa17.61■□□□□ 0.41
SMURF1-201ENST00000361125 PET117Q6UWS5 81 aa17.61■□□□□ 0.41
SMURF1-201ENST00000361125 DMRTA2Q96SC8 542 aa17.61■□□□□ 0.41
SMURF1-201ENST00000361125 CACNA1IQ9P0X4 2223 aa17.61■□□□□ 0.41
SMURF1-201ENST00000361125 MORN2Q502X0 79 aa17.61■□□□□ 0.41
SMURF1-201ENST00000361125 MIEN1Q9BRT3 115 aa17.61■□□□□ 0.41
SMURF1-201ENST00000361125 LOC102724200A0A096LPH7 203 aaPredicted RBP17.61■□□□□ 0.41
SMURF1-201ENST00000361125 ATP5G3P48201 142 aa17.61■□□□□ 0.41
SMURF1-201ENST00000361125 TBR1Q16650 682 aa17.61■□□□□ 0.41
SMURF1-201ENST00000361125 ARL6IP6Q8N6S5 226 aa17.61■□□□□ 0.41
SMURF1-201ENST00000361125 RAB37Q96AX2 223 aa17.61■□□□□ 0.41
SMURF1-201ENST00000361125 SLC17A3O00476 420 aa17.61■□□□□ 0.41
SMURF1-201ENST00000361125 PRSS8Q16651 343 aa17.6■□□□□ 0.41
SMURF1-201ENST00000361125 NUP37Q8NFH4 326 aa17.6■□□□□ 0.41
SMURF1-201ENST00000361125 HOXA5P20719 270 aa17.6■□□□□ 0.41
SMURF1-201ENST00000361125 HLA-DRB1P01911 266 aa17.6■□□□□ 0.41
SMURF1-201ENST00000361125 CBLN1P23435 193 aa17.6■□□□□ 0.41
SMURF1-201ENST00000361125 COLCA1Q6ZS62 124 aa17.6■□□□□ 0.41
SMURF1-201ENST00000361125 UQCR10Q9UDW1 63 aa17.6■□□□□ 0.41
SMURF1-201ENST00000361125 IGKV1D-8A0A087WSZ0 117 aa17.6■□□□□ 0.41
SMURF1-201ENST00000361125 DNLZQ5SXM8 178 aa17.6■□□□□ 0.41
SMURF1-201ENST00000361125 C17orf82Q86X59 251 aaPredicted RBP17.6■□□□□ 0.41
SMURF1-201ENST00000361125 PMCHL1Q16048 86 aa17.59■□□□□ 0.41
SMURF1-201ENST00000361125 WFDC1Q9HC57 220 aa17.59■□□□□ 0.41
SMURF1-201ENST00000361125 SRSF6Q13247 344 aaKnown RBP17.59■□□□□ 0.41
SMURF1-201ENST00000361125 SDF2L1Q9HCN8 221 aa17.59■□□□□ 0.41
SMURF1-201ENST00000361125 YPEL1O60688 119 aa17.59■□□□□ 0.41
SMURF1-201ENST00000361125 THBDP07204 575 aa17.59■□□□□ 0.41
SMURF1-201ENST00000361125 ZNF525Q8N782 197 aa17.59■□□□□ 0.41
SMURF1-201ENST00000361125 YPEL2Q96QA6 119 aa17.59■□□□□ 0.41
SMURF1-201ENST00000361125 THSD7BQ9C0I4 1608 aa17.59■□□□□ 0.41
SMURF1-201ENST00000361125 CRYGSP22914 178 aa17.59■□□□□ 0.41
SMURF1-201ENST00000361125 OR52E5Q8NH55 327 aa17.59■□□□□ 0.41
SMURF1-201ENST00000361125 PLXNA3P51805 1871 aa17.59■□□□□ 0.41
SMURF1-201ENST00000361125 IGHV1-46P01743 117 aa17.59■□□□□ 0.41
SMURF1-201ENST00000361125 ATOH7Q8N100 152 aa17.58■□□□□ 0.41
SMURF1-201ENST00000361125 TRBV20OR9-2A0A075B6H5 130 aa17.58■□□□□ 0.4
SMURF1-201ENST00000361125 TRBV9A0A0B4J1U6 114 aa17.58■□□□□ 0.4
SMURF1-201ENST00000361125 C7orf71A4D174 169 aa17.58■□□□□ 0.4
SMURF1-201ENST00000361125 LINC00587B1AMM8 73 aa17.58■□□□□ 0.4
SMURF1-201ENST00000361125 NABP1Q96AH0 204 aa17.58■□□□□ 0.4
SMURF1-201ENST00000361125 UPK2O00526 184 aa17.58■□□□□ 0.4
SMURF1-201ENST00000361125 SVILO95425 2214 aa17.58■□□□□ 0.4
SMURF1-201ENST00000361125 SAPCD1Q5SSQ6 148 aa17.58■□□□□ 0.4
SMURF1-201ENST00000361125 YAE1D1Q9NRH1 226 aa17.58■□□□□ 0.4
SMURF1-201ENST00000361125 TRIOBPQ9H2D6 2365 aa17.57■□□□□ 0.4
SMURF1-201ENST00000361125 PEX7O00628 323 aa17.57■□□□□ 0.4
SMURF1-201ENST00000361125 LINC00271P0C7V0 271 aa17.57■□□□□ 0.4
SMURF1-201ENST00000361125 HBBP68871 147 aa17.57■□□□□ 0.4
SMURF1-201ENST00000361125 PLAURQ03405 335 aa17.57■□□□□ 0.4
SMURF1-201ENST00000361125 ITLN2Q8WWU7 325 aaPredicted RBP17.57■□□□□ 0.4
SMURF1-201ENST00000361125 TMEM133Q9H2Q1 129 aa17.57■□□□□ 0.4
SMURF1-201ENST00000361125 DOCK6Q96HP0 2047 aa17.57■□□□□ 0.4
SMURF1-201ENST00000361125 NBR2O15453 112 aa17.57■□□□□ 0.4
SMURF1-201ENST00000361125 TCF24Q7RTU0 167 aa17.57■□□□□ 0.4
SMURF1-201ENST00000361125 CD55P08174 381 aa17.57■□□□□ 0.4
SMURF1-201ENST00000361125 CYTL1Q9NRR1 136 aa17.57■□□□□ 0.4
SMURF1-201ENST00000361125 IGKV1-12A0A0C4DH73 117 aa17.56■□□□□ 0.4
SMURF1-201ENST00000361125 E9PLN8 166 aa17.56■□□□□ 0.4
SMURF1-201ENST00000361125 LDLRAD4O15165 306 aa17.56■□□□□ 0.4
SMURF1-201ENST00000361125 IGKV1D-12P01611 117 aa17.56■□□□□ 0.4
SMURF1-201ENST00000361125 OR4D5Q8NGN0 318 aa17.56■□□□□ 0.4
SMURF1-201ENST00000361125 VKORC1Q9BQB6 163 aa17.56■□□□□ 0.4
SMURF1-201ENST00000361125 SCN8AQ9UQD0 1980 aa17.56■□□□□ 0.4
SMURF1-201ENST00000361125 M0R381 172 aa17.56■□□□□ 0.4
SMURF1-201ENST00000361125 SOD3P08294 240 aa17.56■□□□□ 0.4
SMURF1-201ENST00000361125 ZNF324BQ6AW86 544 aaPredicted RBP17.56■□□□□ 0.4
SMURF1-201ENST00000361125 F11RQ9Y624 299 aaKnown RBP17.56■□□□□ 0.4
SMURF1-201ENST00000361125 FOXA3P55318 350 aaPredicted RBP17.56■□□□□ 0.4
SMURF1-201ENST00000361125 OR10AG1Q8NH19 301 aa17.56■□□□□ 0.4
SMURF1-201ENST00000361125 RNASEH2CQ8TDP1 164 aaKnown RBP17.56■□□□□ 0.4
SMURF1-201ENST00000361125 DNAJC13O75165 2243 aa17.56■□□□□ 0.4
SMURF1-201ENST00000361125 GPX4P36969 197 aaPredicted RBP17.55■□□□□ 0.4
SMURF1-201ENST00000361125 SMIM12Q96EX1 92 aa17.55■□□□□ 0.4
SMURF1-201ENST00000361125 MYLKQ15746 1914 aa17.55■□□□□ 0.4
SMURF1-201ENST00000361125 A0A0G2JLM5 398 aa17.55■□□□□ 0.4
SMURF1-201ENST00000361125 CEACAM4O75871 244 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms