RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 NDUFA6P56556 154 aa5.96□□□□□ -1.46
CLCN3-202ENST00000360642 RPL23P62829 140 aaKnown RBP5.96□□□□□ -1.46
CLCN3-202ENST00000360642 SPNS3Q6ZMD2 512 aa5.96□□□□□ -1.46
CLCN3-202ENST00000360642 ZNF709Q8N972 641 aa5.96□□□□□ -1.46
CLCN3-202ENST00000360642 RAB1CQ92928 201 aa5.96□□□□□ -1.46
CLCN3-202ENST00000360642 GGACTQ9BVM4 153 aa5.96□□□□□ -1.46
CLCN3-202ENST00000360642 FAM234AQ9H0X4 552 aa5.96□□□□□ -1.46
CLCN3-202ENST00000360642 PARLQ9H300 379 aa5.96□□□□□ -1.46
CLCN3-202ENST00000360642 OR51M1Q9H341 326 aa5.96□□□□□ -1.46
CLCN3-202ENST00000360642 NIT2Q9NQR4 276 aa5.96□□□□□ -1.46
CLCN3-202ENST00000360642 CALYQ9NYX4 217 aa5.96□□□□□ -1.46
CLCN3-202ENST00000360642 TRAV3A0A0B4J244 114 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 GAGE12BA1L429 117 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 GAGE12HA6NDE8 117 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 RHODO00212 210 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 TIMM23O14925 209 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 FABP1P07148 127 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 KIR2DS2P43631 304 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 ACOT6Q3I5F7 207 aaPredicted RBP5.95□□□□□ -1.46
CLCN3-202ENST00000360642 VKORC1L1Q8N0U8 176 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 OR4A16Q8NH70 328 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 TMEM170AQ8WVE7 144 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 ITLN1Q8WWA0 313 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 FRZBQ92765 325 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 SDSLQ96GA7 329 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 RITA1Q96K30 269 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 DKK2Q9UBU2 259 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 HEATR1Q9H583 2144 aaKnown RBP5.95□□□□□ -1.46
CLCN3-202ENST00000360642 TRGV8A0A0C4DH27 118 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 SMCO3A2RU48 225 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 SPRY3O43610 288 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 MPDU1O75352 247 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 TRGC1P0CF51 173 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 DEFA4P12838 97 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 CDC34P49427 236 aaPredicted RBP5.95□□□□□ -1.46
CLCN3-202ENST00000360642 BSXQ3C1V8 233 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 CT45A1Q5HYN5 189 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 C1orf185Q5T7R7 199 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 PRAMEF5Q5TYX0 476 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 SSX9Q7RTT3 188 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 CT45A3Q8NHU0 189 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 S1PR3Q99500 378 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 LINC00574Q9H8X3 128 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 KBTBD11-OT1A0A1B0GTJ5 212 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 KRTAP23-1A1A580 65 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 NPPCP23582 126 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 CEACAM8P31997 349 aaPredicted RBP5.95□□□□□ -1.46
CLCN3-202ENST00000360642 OPRK1P41145 380 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 RAB7AP51149 207 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 EDDM3BP56851 147 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 FAM201AQ5SY85 155 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 STUMQ69YW2 141 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 TCF23Q7RTU1 214 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 C16orf82Q7Z2V1 217 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.95□□□□□ -1.46
CLCN3-202ENST00000360642 ZNF439Q8NDP4 499 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 OR51G1Q8NGK1 321 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 OR4F5Q8NH21 305 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 RPUSD4Q96CM3 377 aaKnown RBP5.95□□□□□ -1.46
CLCN3-202ENST00000360642 OR4F4Q96R69 305 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 IL19Q9UHD0 177 aa5.95□□□□□ -1.46
CLCN3-202ENST00000360642 CSMD1Q96PZ7 3565 aa5.94□□□□□ -1.46
CLCN3-202ENST00000360642 PLAUP00749 431 aa5.94□□□□□ -1.46
CLCN3-202ENST00000360642 SOD3P08294 240 aa5.94□□□□□ -1.46
CLCN3-202ENST00000360642 ERVK-16P61578 105 aa5.94□□□□□ -1.46
CLCN3-202ENST00000360642 ADIRFQ15847 76 aa5.94□□□□□ -1.46
CLCN3-202ENST00000360642 GCSAMLQ5JQS6 135 aa5.94□□□□□ -1.46
CLCN3-202ENST00000360642 PQLC2Q6ZP29 291 aa5.94□□□□□ -1.46
CLCN3-202ENST00000360642 RBMXL3Q8N7X1 1067 aaKnown RBP5.94□□□□□ -1.46
CLCN3-202ENST00000360642 SFXN3Q9BWM7 321 aa5.94□□□□□ -1.46
CLCN3-202ENST00000360642 HCFC1P51610 2035 aa5.94□□□□□ -1.46
CLCN3-202ENST00000360642 SAA2-SAA4A0A096LPE2 208 aa5.94□□□□□ -1.46
CLCN3-202ENST00000360642 C15orf61A6NNL5 157 aa5.94□□□□□ -1.46
CLCN3-202ENST00000360642 LINC00587B1AMM8 73 aa5.94□□□□□ -1.46
CLCN3-202ENST00000360642 VENTXO95231 258 aa5.94□□□□□ -1.46
CLCN3-202ENST00000360642 IFNA10P01566 189 aa5.94□□□□□ -1.46
CLCN3-202ENST00000360642 IGHV1-46P01743 117 aa5.94□□□□□ -1.46
CLCN3-202ENST00000360642 IGHV2-70P01814 119 aa5.94□□□□□ -1.46
CLCN3-202ENST00000360642 SAA2P0DJI9 122 aaPredicted RBP5.94□□□□□ -1.46
CLCN3-202ENST00000360642 PYY3Q5JQD4 70 aa5.94□□□□□ -1.46
CLCN3-202ENST00000360642 DUX4L9Q6RFH8 374 aaPredicted RBP5.94□□□□□ -1.46
CLCN3-202ENST00000360642 HIST3H2BBQ8N257 126 aa5.94□□□□□ -1.46
CLCN3-202ENST00000360642 ABHD12Q8N2K0 398 aa5.94□□□□□ -1.46
CLCN3-202ENST00000360642 OR4S2Q8NH73 311 aa5.94□□□□□ -1.46
CLCN3-202ENST00000360642 LEAP2Q969E1 77 aa5.94□□□□□ -1.46
CLCN3-202ENST00000360642 TMEM68Q96MH6 324 aa5.94□□□□□ -1.46
CLCN3-202ENST00000360642 GAFA1Q96PS6 74 aa5.94□□□□□ -1.46
CLCN3-202ENST00000360642 MGST2Q99735 147 aa5.94□□□□□ -1.46
CLCN3-202ENST00000360642 SRD5A3Q9H8P0 318 aa5.94□□□□□ -1.46
CLCN3-202ENST00000360642 TMEM14BQ9NUH8 114 aa5.94□□□□□ -1.46
CLCN3-202ENST00000360642 GAR1Q9NY12 217 aaKnown RBP5.94□□□□□ -1.46
CLCN3-202ENST00000360642 RNF7Q9UBF6 113 aa5.94□□□□□ -1.46
CLCN3-202ENST00000360642 MIOXQ9UGB7 285 aa5.94□□□□□ -1.46
CLCN3-202ENST00000360642 DSCAMO60469 2012 aa5.94□□□□□ -1.46
CLCN3-202ENST00000360642 DSCAML1Q8TD84 2053 aa5.93□□□□□ -1.46
CLCN3-202ENST00000360642 TRAV38-1A0A0B4J264 116 aa5.93□□□□□ -1.46
CLCN3-202ENST00000360642 C11orf94C9JXX5 98 aa5.93□□□□□ -1.46
CLCN3-202ENST00000360642 K7EM74 188 aa5.93□□□□□ -1.46
CLCN3-202ENST00000360642 TMEM11P17152 192 aa5.93□□□□□ -1.46
CLCN3-202ENST00000360642 S100PP25815 95 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms