RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 MRPS18CQ9Y3D5 142 aaKnown RBP11.51□□□□□ -0.57
VCP-201ENST00000358901 RFNGQ9Y644 331 aa11.51□□□□□ -0.57
VCP-201ENST00000358901 IGHV1-69-2A0A0G2JMI3 117 aa11.51□□□□□ -0.57
VCP-201ENST00000358901 PINLYPA6NC86 204 aa11.51□□□□□ -0.57
VCP-201ENST00000358901 LINC00271P0C7V0 271 aa11.51□□□□□ -0.57
VCP-201ENST00000358901 FAM106CPP0CH98 169 aa11.51□□□□□ -0.57
VCP-201ENST00000358901 MBNL2Q5VZF2 373 aaKnown RBP11.51□□□□□ -0.57
VCP-201ENST00000358901 ZNF600Q6ZNG1 722 aa11.51□□□□□ -0.57
VCP-201ENST00000358901 C5orf24Q7Z6I8 188 aa11.51□□□□□ -0.57
VCP-201ENST00000358901 C17orf82Q86X59 251 aaPredicted RBP11.51□□□□□ -0.57
VCP-201ENST00000358901 TMEM171Q8WVE6 324 aa11.51□□□□□ -0.57
VCP-201ENST00000358901 ATG101Q9BSB4 218 aa11.51□□□□□ -0.57
VCP-201ENST00000358901 VSIRQ9H7M9 311 aa11.51□□□□□ -0.57
VCP-201ENST00000358901 ATXN7O15265 892 aaPredicted RBP11.51□□□□□ -0.57
VCP-201ENST00000358901 ZNF207O43670 478 aaKnown RBP11.51□□□□□ -0.57
VCP-201ENST00000358901 PLAURQ03405 335 aa11.51□□□□□ -0.57
VCP-201ENST00000358901 OR10AG1Q8NH19 301 aa11.51□□□□□ -0.57
VCP-201ENST00000358901 RAB37Q96AX2 223 aa11.51□□□□□ -0.57
VCP-201ENST00000358901 C14orf144Q96I85 54 aa11.51□□□□□ -0.57
VCP-201ENST00000358901 RNF115Q9Y4L5 304 aa11.51□□□□□ -0.57
VCP-201ENST00000358901 GFRA1P56159 465 aa11.51□□□□□ -0.57
VCP-201ENST00000358901 HBBP68871 147 aa11.51□□□□□ -0.57
VCP-201ENST00000358901 HEPN1Q6WQI6 88 aa11.51□□□□□ -0.57
VCP-201ENST00000358901 ZNF497Q6ZNH5 498 aa11.51□□□□□ -0.57
VCP-201ENST00000358901 PLCE1Q9P212 2302 aa11.5□□□□□ -0.57
VCP-201ENST00000358901 IGHV3OR16-13A0A075B7E8 117 aa11.5□□□□□ -0.57
VCP-201ENST00000358901 IGHV3-74A0A0B4J1X5 117 aa11.5□□□□□ -0.57
VCP-201ENST00000358901 TCF23Q7RTU1 214 aa11.5□□□□□ -0.57
VCP-201ENST00000358901 FAM19A2Q8N3H0 131 aa11.5□□□□□ -0.57
VCP-201ENST00000358901 C9orf106Q8NAJ2 232 aa11.5□□□□□ -0.57
VCP-201ENST00000358901 RALYQ9UKM9 306 aaKnown RBP11.5□□□□□ -0.57
VCP-201ENST00000358901 C9orf172C9J069 976 aa11.5□□□□□ -0.57
VCP-201ENST00000358901 PF4V1P10720 104 aa11.5□□□□□ -0.57
VCP-201ENST00000358901 TFPI2P48307 235 aa11.5□□□□□ -0.57
VCP-201ENST00000358901 GCSAMLQ5JQS6 135 aa11.5□□□□□ -0.57
VCP-201ENST00000358901 ZNF324BQ6AW86 544 aaPredicted RBP11.5□□□□□ -0.57
VCP-201ENST00000358901 FBXL15Q9H469 300 aa11.5□□□□□ -0.57
VCP-201ENST00000358901 RBFOX2O43251 390 aaKnown RBP eCLIP11.5□□□□□ -0.57
VCP-201ENST00000358901 GCSHP23434 173 aa11.5□□□□□ -0.57
VCP-201ENST00000358901 S4R3C0 116 aa11.5□□□□□ -0.57
VCP-201ENST00000358901 ST6GALNAC3Q8NDV1 305 aa11.49□□□□□ -0.57
VCP-201ENST00000358901 C1orf162Q8NEQ5 155 aaPredicted RBP11.49□□□□□ -0.57
VCP-201ENST00000358901 ZFP36L1Q07352 338 aaKnown RBP11.49□□□□□ -0.57
VCP-201ENST00000358901 TMEM106BQ9NUM4 274 aa11.49□□□□□ -0.57
VCP-201ENST00000358901 AUP1Q9Y679 476 aa11.49□□□□□ -0.57
VCP-201ENST00000358901 WDR81Q562E7 1941 aa11.49□□□□□ -0.57
VCP-201ENST00000358901 PEX7O00628 323 aa11.49□□□□□ -0.57
VCP-201ENST00000358901 ZNF883P0CG24 379 aa11.49□□□□□ -0.57
VCP-201ENST00000358901 WDR82Q6UXN9 313 aa11.49□□□□□ -0.57
VCP-201ENST00000358901 TMEM144Q7Z5S9 345 aa11.49□□□□□ -0.57
VCP-201ENST00000358901 METTL26Q96S19 204 aa11.49□□□□□ -0.57
VCP-201ENST00000358901 PNRC2Q9NPJ4 139 aaKnown RBP11.49□□□□□ -0.57
VCP-201ENST00000358901 M0R3E3 92 aa11.49□□□□□ -0.57
VCP-201ENST00000358901 UBE2CO00762 179 aa11.49□□□□□ -0.57
VCP-201ENST00000358901 CCL3L1P16619 93 aa11.49□□□□□ -0.57
VCP-201ENST00000358901 QRFPP83859 136 aa11.49□□□□□ -0.57
VCP-201ENST00000358901 TBR1Q16650 682 aa11.49□□□□□ -0.57
VCP-201ENST00000358901 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.49□□□□□ -0.57
VCP-201ENST00000358901 MRPL20Q9BYC9 149 aaKnown RBP11.49□□□□□ -0.57
VCP-201ENST00000358901 TRAV30A0A087WSZ9 112 aa11.48□□□□□ -0.57
VCP-201ENST00000358901 SERF1AO75920 110 aa11.48□□□□□ -0.57
VCP-201ENST00000358901 LIPFP07098 398 aa11.48□□□□□ -0.57
VCP-201ENST00000358901 CXCL1P09341 107 aa11.48□□□□□ -0.57
VCP-201ENST00000358901 CYB5R2Q6BCY4 276 aa11.48□□□□□ -0.57
VCP-201ENST00000358901 TCF24Q7RTU0 167 aa11.48□□□□□ -0.57
VCP-201ENST00000358901 GGNQ86UU5 652 aa11.48□□□□□ -0.57
VCP-201ENST00000358901 TMEM70Q9BUB7 260 aa11.48□□□□□ -0.57
VCP-201ENST00000358901 RNASE7Q9H1E1 156 aaKnown RBP11.48□□□□□ -0.57
VCP-201ENST00000358901 MAP1LC3AQ9H492 121 aa11.48□□□□□ -0.57
VCP-201ENST00000358901 ZNF581Q9P0T4 197 aa11.48□□□□□ -0.57
VCP-201ENST00000358901 PRR19A6NJB7 356 aa11.48□□□□□ -0.57
VCP-201ENST00000358901 ANOS1P23352 680 aa11.48□□□□□ -0.57
VCP-201ENST00000358901 RELQ04864 619 aaPredicted RBP11.48□□□□□ -0.57
VCP-201ENST00000358901 PARD6GQ9BYG4 376 aaPredicted RBP11.48□□□□□ -0.57
VCP-201ENST00000358901 OR52E5Q8NH55 327 aa11.48□□□□□ -0.57
VCP-201ENST00000358901 MBD3L1Q8WWY6 194 aa11.48□□□□□ -0.57
VCP-201ENST00000358901 DOCK11Q5JSL3 2073 aa11.47□□□□□ -0.57
VCP-201ENST00000358901 GFI1BQ5VTD9 330 aa11.47□□□□□ -0.57
VCP-201ENST00000358901 ZCCHC24Q8N2G6 241 aaKnown RBP11.47□□□□□ -0.57
VCP-201ENST00000358901 OR10J6PQ8NGY7 276 aa11.47□□□□□ -0.57
VCP-201ENST00000358901 TMEM170AQ8WVE7 144 aa11.47□□□□□ -0.57
VCP-201ENST00000358901 KLK15Q9H2R5 256 aa11.47□□□□□ -0.57
VCP-201ENST00000358901 WDR83OSQ9Y284 106 aa11.47□□□□□ -0.57
VCP-201ENST00000358901 PTPRDP23468 1912 aa11.47□□□□□ -0.57
VCP-201ENST00000358901 NPIPB11E5RHQ5 1161 aa11.47□□□□□ -0.57
VCP-201ENST00000358901 MORN2Q502X0 79 aa11.47□□□□□ -0.57
VCP-201ENST00000358901 OR1N2Q8NGR9 330 aa11.47□□□□□ -0.57
VCP-201ENST00000358901 CX3CL1P78423 397 aa11.47□□□□□ -0.57
VCP-201ENST00000358901 LINC01560Q8TB33 94 aa11.47□□□□□ -0.57
VCP-201ENST00000358901 CACNG8Q8WXS5 425 aa11.47□□□□□ -0.57
VCP-201ENST00000358901 SAA2-SAA4A0A096LPE2 208 aa11.46□□□□□ -0.57
VCP-201ENST00000358901 MUC21A0A0G2JKD1 596 aa11.46□□□□□ -0.57
VCP-201ENST00000358901 MUC21A0A140T8X8 626 aa11.46□□□□□ -0.57
VCP-201ENST00000358901 TM4SF5O14894 197 aa11.46□□□□□ -0.57
VCP-201ENST00000358901 YPEL1O60688 119 aa11.46□□□□□ -0.57
VCP-201ENST00000358901 SAA2P0DJI9 122 aaPredicted RBP11.46□□□□□ -0.57
VCP-201ENST00000358901 TM4SF20Q53R12 229 aa11.46□□□□□ -0.57
VCP-201ENST00000358901 MUC21Q5SSG8 566 aa11.46□□□□□ -0.57
VCP-201ENST00000358901 TMEM136Q6ZRR5 245 aa11.46□□□□□ -0.57
VCP-201ENST00000358901 OCC1Q8TAD7 63 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 152.8 ms