RNA–Protein interactions for RNA: ENST00000358540.6

PTPN5-201, Transcript of protein tyrosine phosphatase, non-receptor type 5, humanhuman

TSL 1 (best) BASIC

Gene PTPN5, Length 3,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5-201ENST00000358540 LYPD2Q6UXB3 125 aa13.12□□□□□ -0.31
PTPN5-201ENST00000358540 CMTM2Q8TAZ6 248 aa13.12□□□□□ -0.31
PTPN5-201ENST00000358540 LINC01560Q8TB33 94 aa13.12□□□□□ -0.31
PTPN5-201ENST00000358540 H1FXQ92522 213 aaKnown RBP13.12□□□□□ -0.31
PTPN5-201ENST00000358540 TMEM147Q9BVK8 224 aa13.12□□□□□ -0.31
PTPN5-201ENST00000358540 IDI2-AS1Q9NZ38 188 aa13.12□□□□□ -0.31
PTPN5-201ENST00000358540 SLC25A10Q9UBX3 287 aaPredicted RBP13.12□□□□□ -0.31
PTPN5-201ENST00000358540 PLAUP00749 431 aa13.11□□□□□ -0.31
PTPN5-201ENST00000358540 CHRNB4P30926 498 aa13.11□□□□□ -0.31
PTPN5-201ENST00000358540 RPP25LQ8N5L8 163 aaKnown RBP13.11□□□□□ -0.31
PTPN5-201ENST00000358540 PSMG3Q9BT73 122 aaPredicted RBP13.11□□□□□ -0.31
PTPN5-201ENST00000358540 VAMP8Q9BV40 100 aa13.11□□□□□ -0.31
PTPN5-201ENST00000358540 HINT2Q9BX68 163 aa13.11□□□□□ -0.31
PTPN5-201ENST00000358540 DYNLRB1Q9NP97 96 aa13.11□□□□□ -0.31
PTPN5-201ENST00000358540 ZFP30Q9Y2G7 519 aa13.11□□□□□ -0.31
PTPN5-201ENST00000358540 Q6ZWC4 215 aa13.11□□□□□ -0.31
PTPN5-201ENST00000358540 ABHD12Q8N2K0 398 aa13.11□□□□□ -0.31
PTPN5-201ENST00000358540 C20orf144Q9BQM9 153 aa13.11□□□□□ -0.31
PTPN5-201ENST00000358540 HEYLQ9NQ87 328 aaPredicted RBP13.11□□□□□ -0.31
PTPN5-201ENST00000358540 E7EQL1 145 aa13.11□□□□□ -0.31
PTPN5-201ENST00000358540 SRP14P37108 136 aaKnown RBP13.11□□□□□ -0.31
PTPN5-201ENST00000358540 NHLH1Q02575 133 aa13.11□□□□□ -0.31
PTPN5-201ENST00000358540 RBPJQ06330 500 aa13.11□□□□□ -0.31
PTPN5-201ENST00000358540 MMDQ15546 238 aa13.11□□□□□ -0.31
PTPN5-201ENST00000358540 MSRB2Q9Y3D2 182 aa13.11□□□□□ -0.31
PTPN5-201ENST00000358540 ARFGEF3Q5TH69 2177 aa13.1□□□□□ -0.31
PTPN5-201ENST00000358540 TANC2Q9HCD6 1990 aa13.1□□□□□ -0.31
PTPN5-201ENST00000358540 RRHO14718 337 aa13.1□□□□□ -0.31
PTPN5-201ENST00000358540 TYMSP04818 313 aa13.1□□□□□ -0.31
PTPN5-201ENST00000358540 CDKN1AP38936 164 aa13.1□□□□□ -0.31
PTPN5-201ENST00000358540 SERF2P84101 59 aa13.1□□□□□ -0.31
PTPN5-201ENST00000358540 RELBQ01201 579 aa13.1□□□□□ -0.31
PTPN5-201ENST00000358540 TMEM183BQ1AE95 376 aa13.1□□□□□ -0.31
PTPN5-201ENST00000358540 TEX36Q5VZQ5 186 aa13.1□□□□□ -0.31
PTPN5-201ENST00000358540 DDB2Q92466 427 aa13.1□□□□□ -0.31
PTPN5-201ENST00000358540 CIB3Q96Q77 187 aaPredicted RBP13.1□□□□□ -0.31
PTPN5-201ENST00000358540 HSPB9Q9BQS6 159 aa13.1□□□□□ -0.31
PTPN5-201ENST00000358540 TNCP24821 2201 aa13.1□□□□□ -0.31
PTPN5-201ENST00000358540 NKX6-3A6NJ46 265 aa13.1□□□□□ -0.31
PTPN5-201ENST00000358540 SHISA9B4DS77 424 aa13.1□□□□□ -0.31
PTPN5-201ENST00000358540 RPL31P62899 125 aaKnown RBP13.1□□□□□ -0.31
PTPN5-201ENST00000358540 FFAR4Q5NUL3 377 aa13.1□□□□□ -0.31
PTPN5-201ENST00000358540 TET2Q6N021 2002 aaPredicted RBP13.1□□□□□ -0.31
PTPN5-201ENST00000358540 C20orf202A1L168 122 aa13.09□□□□□ -0.31
PTPN5-201ENST00000358540 REG1BP48304 166 aa13.09□□□□□ -0.31
PTPN5-201ENST00000358540 ETFRF1Q6IPR1 90 aa13.09□□□□□ -0.31
PTPN5-201ENST00000358540 OR4S2Q8NH73 311 aa13.09□□□□□ -0.31
PTPN5-201ENST00000358540 ANKHD1Q8IWZ3 2542 aaKnown RBP13.09□□□□□ -0.31
PTPN5-201ENST00000358540 TMEM250H0YL14 139 aa13.09□□□□□ -0.31
PTPN5-201ENST00000358540 PTTG1IPP53801 180 aa13.09□□□□□ -0.31
PTPN5-201ENST00000358540 RPL15P61313 204 aaKnown RBP13.09□□□□□ -0.31
PTPN5-201ENST00000358540 PRB3Q04118 309 aaPredicted RBP13.09□□□□□ -0.31
PTPN5-201ENST00000358540 GCSAMLQ5JQS6 135 aa13.09□□□□□ -0.31
PTPN5-201ENST00000358540 SAPCD1Q5SSQ6 148 aa13.09□□□□□ -0.31
PTPN5-201ENST00000358540 TPTE2P1Q5T6R2 138 aa13.09□□□□□ -0.31
PTPN5-201ENST00000358540 MRPL52Q86TS9 123 aaKnown RBP13.09□□□□□ -0.31
PTPN5-201ENST00000358540 ZNF439Q8NDP4 499 aa13.09□□□□□ -0.31
PTPN5-201ENST00000358540 PINX1Q96BK5 328 aaKnown RBP13.09□□□□□ -0.31
PTPN5-201ENST00000358540 NPCDR1Q9BY65 106 aa13.09□□□□□ -0.31
PTPN5-201ENST00000358540 PPIAL4EA0A075B759 164 aa13.08□□□□□ -0.31
PTPN5-201ENST00000358540 PPIAL4DF5H284 164 aa13.08□□□□□ -0.31
PTPN5-201ENST00000358540 LYNX1G3V0Z9 82 aa13.08□□□□□ -0.31
PTPN5-201ENST00000358540 IGKV1-16P04430 117 aa13.08□□□□□ -0.31
PTPN5-201ENST00000358540 PPIAL4FP0DN26 164 aa13.08□□□□□ -0.31
PTPN5-201ENST00000358540 LYNX1P0DP58 116 aa13.08□□□□□ -0.31
PTPN5-201ENST00000358540 TMPRSS3P57727 454 aa13.08□□□□□ -0.31
PTPN5-201ENST00000358540 OR4A47Q6IF82 309 aa13.08□□□□□ -0.31
PTPN5-201ENST00000358540 RNASE6Q93091 150 aaKnown RBP13.08□□□□□ -0.31
PTPN5-201ENST00000358540 IMMP2LQ96T52 175 aa13.08□□□□□ -0.31
PTPN5-201ENST00000358540 PXMP4Q9Y6I8 212 aa13.08□□□□□ -0.31
PTPN5-201ENST00000358540 TRAV38-1A0A0B4J264 116 aa13.08□□□□□ -0.32
PTPN5-201ENST00000358540 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.08□□□□□ -0.32
PTPN5-201ENST00000358540 hADV38S2A0JD32 116 aa13.08□□□□□ -0.32
PTPN5-201ENST00000358540 TMEM178BH3BS89 294 aa13.08□□□□□ -0.32
PTPN5-201ENST00000358540 RBX1P62877 108 aa13.08□□□□□ -0.32
PTPN5-201ENST00000358540 TEX43Q6ZNM6 134 aa13.08□□□□□ -0.32
PTPN5-201ENST00000358540 SLC35E1Q96K37 410 aa13.08□□□□□ -0.32
PTPN5-201ENST00000358540 RPUSD1Q9UJJ7 312 aaKnown RBP13.08□□□□□ -0.32
PTPN5-201ENST00000358540 TCF19Q9Y242 345 aa13.08□□□□□ -0.32
PTPN5-201ENST00000358540 LRBAP50851 2863 aa13.08□□□□□ -0.32
PTPN5-201ENST00000358540 PAGE4O60829 102 aa13.08□□□□□ -0.32
PTPN5-201ENST00000358540 ADMP35318 185 aa13.08□□□□□ -0.32
PTPN5-201ENST00000358540 C22orf15Q8WYQ4 148 aa13.08□□□□□ -0.32
PTPN5-201ENST00000358540 COL8A2P25067 703 aa13.07□□□□□ -0.32
PTPN5-201ENST00000358540 TPPP2P59282 170 aa13.07□□□□□ -0.32
PTPN5-201ENST00000358540 LCN2P80188 198 aa13.07□□□□□ -0.32
PTPN5-201ENST00000358540 OR10G9Q8NGN4 311 aa13.07□□□□□ -0.32
PTPN5-201ENST00000358540 OR10G7Q8NGN6 311 aa13.07□□□□□ -0.32
PTPN5-201ENST00000358540 DLX1P56177 255 aa13.07□□□□□ -0.32
PTPN5-201ENST00000358540 RANP62826 216 aaKnown RBP13.07□□□□□ -0.32
PTPN5-201ENST00000358540 CDSNQ15517 529 aa13.07□□□□□ -0.32
PTPN5-201ENST00000358540 ZNF709Q8N972 641 aa13.07□□□□□ -0.32
PTPN5-201ENST00000358540 VKORC1Q9BQB6 163 aa13.07□□□□□ -0.32
PTPN5-201ENST00000358540 CTSZQ9UBR2 303 aa13.07□□□□□ -0.32
PTPN5-201ENST00000358540 RBFOX2O43251 390 aaKnown RBP eCLIP13.06□□□□□ -0.32
PTPN5-201ENST00000358540 TMEM200BQ69YZ2 307 aa13.06□□□□□ -0.32
PTPN5-201ENST00000358540 CCL25O15444 150 aa13.06□□□□□ -0.32
PTPN5-201ENST00000358540 CT45A6P0DMU7 189 aa13.06□□□□□ -0.32
PTPN5-201ENST00000358540 CT45A5P0DMU8 189 aa13.06□□□□□ -0.32
PTPN5-201ENST00000358540 CT45A7P0DMV0 189 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms