RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 SIPA1L3O60292 1781 aaPredicted RBP9.8□□□□□ -0.84
SPTBN1-202ENST00000356805 IGHV1-69-2A0A0G2JMI3 117 aa9.8□□□□□ -0.84
SPTBN1-202ENST00000356805 LINC01549A6NIU2 74 aa9.8□□□□□ -0.84
SPTBN1-202ENST00000356805 PEX7O00628 323 aa9.8□□□□□ -0.84
SPTBN1-202ENST00000356805 TMEM50AO95807 157 aa9.8□□□□□ -0.84
SPTBN1-202ENST00000356805 FTH1P19P0C7X4 201 aa9.8□□□□□ -0.84
SPTBN1-202ENST00000356805 HSPE1P61604 102 aaKnown RBP9.8□□□□□ -0.84
SPTBN1-202ENST00000356805 LRTM2Q8N967 370 aa9.8□□□□□ -0.84
SPTBN1-202ENST00000356805 PRR19A6NJB7 356 aa9.8□□□□□ -0.84
SPTBN1-202ENST00000356805 ICAM4Q14773 271 aa9.8□□□□□ -0.84
SPTBN1-202ENST00000356805 GNB1LQ9BYB4 327 aa9.8□□□□□ -0.84
SPTBN1-202ENST00000356805 DUSP15Q9H1R2 295 aaPredicted RBP9.8□□□□□ -0.84
SPTBN1-202ENST00000356805 CEP250Q9BV73 2442 aa9.79□□□□□ -0.84
SPTBN1-202ENST00000356805 TMEM42Q69YG0 159 aa9.79□□□□□ -0.84
SPTBN1-202ENST00000356805 HIST3H2BBQ8N257 126 aa9.79□□□□□ -0.84
SPTBN1-202ENST00000356805 ODAMA1E959 279 aa9.79□□□□□ -0.84
SPTBN1-202ENST00000356805 GCHFRP30047 84 aa9.79□□□□□ -0.84
SPTBN1-202ENST00000356805 PSME4Q14997 1843 aa9.79□□□□□ -0.84
SPTBN1-202ENST00000356805 GLMPQ8WWB7 406 aa9.79□□□□□ -0.84
SPTBN1-202ENST00000356805 DTX4Q9Y2E6 619 aa9.79□□□□□ -0.84
SPTBN1-202ENST00000356805 ITGBL1O95965 494 aaPredicted RBP9.79□□□□□ -0.84
SPTBN1-202ENST00000356805 CD5P06127 495 aa9.79□□□□□ -0.84
SPTBN1-202ENST00000356805 P2RY6Q15077 328 aa9.79□□□□□ -0.84
SPTBN1-202ENST00000356805 STHQ8IWL8 128 aa9.79□□□□□ -0.84
SPTBN1-202ENST00000356805 A0A1B0GUT8 65 aa9.79□□□□□ -0.84
SPTBN1-202ENST00000356805 PIN1P1O15428 100 aa9.79□□□□□ -0.84
SPTBN1-202ENST00000356805 ST6GALNAC6Q969X2 333 aa9.79□□□□□ -0.84
SPTBN1-202ENST00000356805 SLC25A2Q9BXI2 301 aa9.79□□□□□ -0.84
SPTBN1-202ENST00000356805 FUT5Q11128 374 aa9.78□□□□□ -0.84
SPTBN1-202ENST00000356805 PCOLCEQ15113 449 aa9.78□□□□□ -0.84
SPTBN1-202ENST00000356805 UBE2DNLQ8IWF7 75 aa9.78□□□□□ -0.84
SPTBN1-202ENST00000356805 TRAV24A0A0B4J272 114 aa9.78□□□□□ -0.84
SPTBN1-202ENST00000356805 SPINT1O43278 529 aa9.78□□□□□ -0.84
SPTBN1-202ENST00000356805 SFTA2Q6UW10 78 aa9.78□□□□□ -0.84
SPTBN1-202ENST00000356805 RFLNBQ8N5W9 214 aa9.78□□□□□ -0.84
SPTBN1-202ENST00000356805 KIR3DL3Q8N743 410 aa9.78□□□□□ -0.84
SPTBN1-202ENST00000356805 C1orf162Q8NEQ5 155 aaPredicted RBP9.78□□□□□ -0.84
SPTBN1-202ENST00000356805 LINC01560Q8TB33 94 aa9.78□□□□□ -0.84
SPTBN1-202ENST00000356805 REPIN1Q9BWE0 567 aaKnown RBP9.78□□□□□ -0.84
SPTBN1-202ENST00000356805 TRPM3Q9HCF6 1732 aaPredicted RBP9.78□□□□□ -0.84
SPTBN1-202ENST00000356805 A0A1W2PP11 408 aa9.78□□□□□ -0.84
SPTBN1-202ENST00000356805 COLCA2A8K830 154 aa9.78□□□□□ -0.84
SPTBN1-202ENST00000356805 NDUFA2O43678 99 aa9.78□□□□□ -0.84
SPTBN1-202ENST00000356805 CRPP02741 224 aa9.78□□□□□ -0.84
SPTBN1-202ENST00000356805 TBR1Q16650 682 aa9.78□□□□□ -0.84
SPTBN1-202ENST00000356805 FOXA2Q9Y261 457 aaPredicted RBP9.78□□□□□ -0.84
SPTBN1-202ENST00000356805 POLEQ07864 2286 aa9.78□□□□□ -0.84
SPTBN1-202ENST00000356805 IZUMO1RA6ND01 250 aa9.78□□□□□ -0.84
SPTBN1-202ENST00000356805 IFNL4K9M1U5 179 aa9.78□□□□□ -0.84
SPTBN1-202ENST00000356805 CSRP3P50461 194 aa9.78□□□□□ -0.84
SPTBN1-202ENST00000356805 HSD52Q0P140 79 aa9.78□□□□□ -0.84
SPTBN1-202ENST00000356805 ZNF146Q15072 292 aa9.78□□□□□ -0.84
SPTBN1-202ENST00000356805 Q5PR19 223 aa9.78□□□□□ -0.84
SPTBN1-202ENST00000356805 LRRK1Q38SD2 2015 aa9.78□□□□□ -0.84
SPTBN1-202ENST00000356805 TRAV8-2A0A0B4J237 113 aa9.78□□□□□ -0.84
SPTBN1-202ENST00000356805 LY75O60449 1722 aa9.78□□□□□ -0.84
SPTBN1-202ENST00000356805 A0A0J9YW62 118 aa9.78□□□□□ -0.84
SPTBN1-202ENST00000356805 J3QW42 95 aa9.78□□□□□ -0.84
SPTBN1-202ENST00000356805 PAX2Q02962 417 aa9.78□□□□□ -0.84
SPTBN1-202ENST00000356805 CHCHD1Q96BP2 118 aaKnown RBP9.78□□□□□ -0.84
SPTBN1-202ENST00000356805 PRSS53Q2L4Q9 553 aa9.78□□□□□ -0.84
SPTBN1-202ENST00000356805 ZFAND6Q6FIF0 208 aa9.78□□□□□ -0.84
SPTBN1-202ENST00000356805 GTF3AQ92664 365 aaKnown RBP9.78□□□□□ -0.84
SPTBN1-202ENST00000356805 MEGF9Q9H1U4 602 aa9.78□□□□□ -0.84
SPTBN1-202ENST00000356805 PGPEP1LA6NFU8 196 aa9.77□□□□□ -0.84
SPTBN1-202ENST00000356805 IGHV3OR16-8A0A075B7F1 116 aa9.77□□□□□ -0.84
SPTBN1-202ENST00000356805 FOXH1O75593 365 aa9.77□□□□□ -0.84
SPTBN1-202ENST00000356805 UCP1P25874 307 aa9.77□□□□□ -0.84
SPTBN1-202ENST00000356805 DNM1P46Q6ZS02 220 aa9.77□□□□□ -0.84
SPTBN1-202ENST00000356805 TRAV1-1A0A0B4J248 108 aa9.77□□□□□ -0.85
SPTBN1-202ENST00000356805 IGHMP01871 453 aa9.77□□□□□ -0.85
SPTBN1-202ENST00000356805 TDGF1P3P51864 188 aa9.77□□□□□ -0.85
SPTBN1-202ENST00000356805 FAM71F2Q6NXP2 309 aa9.77□□□□□ -0.85
SPTBN1-202ENST00000356805 SCARF2Q96GP6 870 aaPredicted RBP9.77□□□□□ -0.85
SPTBN1-202ENST00000356805 NPCDR1Q9BY65 106 aa9.77□□□□□ -0.85
SPTBN1-202ENST00000356805 NPIPB3Q92617 1050 aa9.77□□□□□ -0.85
SPTBN1-202ENST00000356805 ZGRF1Q86YA3 2104 aa9.77□□□□□ -0.85
SPTBN1-202ENST00000356805 LOC285556D6RIA3 1793 aa9.77□□□□□ -0.85
SPTBN1-202ENST00000356805 IGLV1-36A0A0B4J1U3 117 aa9.77□□□□□ -0.85
SPTBN1-202ENST00000356805 IGKV1D-33P01593 117 aa9.77□□□□□ -0.85
SPTBN1-202ENST00000356805 IGKV1-33P01594 117 aa9.77□□□□□ -0.85
SPTBN1-202ENST00000356805 ZNF415Q09FC8 603 aa9.77□□□□□ -0.85
SPTBN1-202ENST00000356805 NR2C2APQ86WQ0 139 aa9.77□□□□□ -0.85
SPTBN1-202ENST00000356805 KLF14Q8TD94 323 aaPredicted RBP9.77□□□□□ -0.85
SPTBN1-202ENST00000356805 SERF1AO75920 110 aa9.77□□□□□ -0.85
SPTBN1-202ENST00000356805 IGKV1D-16P01601 117 aa9.77□□□□□ -0.85
SPTBN1-202ENST00000356805 RASL11AQ6T310 242 aa9.77□□□□□ -0.85
SPTBN1-202ENST00000356805 FBLN5Q9UBX5 448 aa9.77□□□□□ -0.85
SPTBN1-202ENST00000356805 UBE2V1Q13404 147 aa9.77□□□□□ -0.85
SPTBN1-202ENST00000356805 CLEC19AQ6UXS0 136 aa9.77□□□□□ -0.85
SPTBN1-202ENST00000356805 APOHP02749 345 aaPredicted RBP9.76□□□□□ -0.85
SPTBN1-202ENST00000356805 PTGDSP41222 190 aa9.76□□□□□ -0.85
SPTBN1-202ENST00000356805 FMC1Q96HJ9 113 aa9.76□□□□□ -0.85
SPTBN1-202ENST00000356805 TSPAN7P41732 249 aa9.76□□□□□ -0.85
SPTBN1-202ENST00000356805 FOXA3P55318 350 aaPredicted RBP9.76□□□□□ -0.85
SPTBN1-202ENST00000356805 GTSCR1Q86UQ5 136 aa9.76□□□□□ -0.85
SPTBN1-202ENST00000356805 H3BUT2 72 aa9.76□□□□□ -0.85
SPTBN1-202ENST00000356805 TM2D1Q9BX74 207 aa9.76□□□□□ -0.85
SPTBN1-202ENST00000356805 PAPPAQ13219 1627 aa9.76□□□□□ -0.85
SPTBN1-202ENST00000356805 PEBP1P30086 187 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms