RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 FAM74A1Q5RGS3 127 aa14.42□□□□□ -0.1
SMARCD3-202ENST00000356800 IL17RELQ6ZVW7 336 aa14.42□□□□□ -0.1
SMARCD3-202ENST00000356800 TMEM219Q86XT9 240 aa14.42□□□□□ -0.1
SMARCD3-202ENST00000356800 LILRB2Q8N423 598 aa14.42□□□□□ -0.1
SMARCD3-202ENST00000356800 SLC24A4Q8NFF2 622 aa14.42□□□□□ -0.1
SMARCD3-202ENST00000356800 LRRC20Q8TCA0 184 aa14.42□□□□□ -0.1
SMARCD3-202ENST00000356800 PARD6GQ9BYG4 376 aaPredicted RBP14.42□□□□□ -0.1
SMARCD3-202ENST00000356800 OR8U8P0C7N1 319 aa14.41□□□□□ -0.1
SMARCD3-202ENST00000356800 RPL27AP46776 148 aaKnown RBP14.41□□□□□ -0.1
SMARCD3-202ENST00000356800 RAB11AP62491 216 aa14.41□□□□□ -0.1
SMARCD3-202ENST00000356800 AANATQ16613 207 aa14.41□□□□□ -0.1
SMARCD3-202ENST00000356800 BSXQ3C1V8 233 aa14.41□□□□□ -0.1
SMARCD3-202ENST00000356800 RBM14Q96PK6 669 aaKnown RBP14.41□□□□□ -0.1
SMARCD3-202ENST00000356800 A6NDX4 124 aa14.4□□□□□ -0.1
SMARCD3-202ENST00000356800 ACTL6BO94805 426 aa14.4□□□□□ -0.1
SMARCD3-202ENST00000356800 IFNA5P01569 189 aa14.4□□□□□ -0.1
SMARCD3-202ENST00000356800 FAM157CP0CG43 387 aa14.4□□□□□ -0.1
SMARCD3-202ENST00000356800 NPY1RP25929 384 aa14.4□□□□□ -0.1
SMARCD3-202ENST00000356800 WT1-ASQ06250 92 aa14.4□□□□□ -0.1
SMARCD3-202ENST00000356800 VWC2Q2TAL6 325 aa14.4□□□□□ -0.1
SMARCD3-202ENST00000356800 HSD17B11Q8NBQ5 300 aa14.4□□□□□ -0.1
SMARCD3-202ENST00000356800 RNF141Q8WVD5 230 aa14.4□□□□□ -0.1
SMARCD3-202ENST00000356800 ZNF48Q96MX3 618 aaPredicted RBP14.4□□□□□ -0.1
SMARCD3-202ENST00000356800 GGACTQ9BVM4 153 aa14.4□□□□□ -0.1
SMARCD3-202ENST00000356800 C1RLQ9NZP8 487 aa14.4□□□□□ -0.1
SMARCD3-202ENST00000356800 SONP18583 2426 aaKnown RBP14.4□□□□□ -0.1
SMARCD3-202ENST00000356800 IGLC7A0M8Q6 106 aa14.39□□□□□ -0.11
SMARCD3-202ENST00000356800 LINC00862A6NCI5 91 aa14.39□□□□□ -0.11
SMARCD3-202ENST00000356800 TEX22C9J3V5 150 aa14.39□□□□□ -0.11
SMARCD3-202ENST00000356800 PRSS46E5RG02 174 aa14.39□□□□□ -0.11
SMARCD3-202ENST00000356800 FBXO24O75426 580 aa14.39□□□□□ -0.11
SMARCD3-202ENST00000356800 ETV3LQ6ZN32 361 aa14.39□□□□□ -0.11
SMARCD3-202ENST00000356800 SRSF12Q8WXF0 261 aaKnown RBP14.39□□□□□ -0.11
SMARCD3-202ENST00000356800 GNPNAT1Q96EK6 184 aaPredicted RBP14.39□□□□□ -0.11
SMARCD3-202ENST00000356800 SLC25A33Q9BSK2 321 aa14.39□□□□□ -0.11
SMARCD3-202ENST00000356800 TMEM147Q9BVK8 224 aa14.39□□□□□ -0.11
SMARCD3-202ENST00000356800 ANK3Q12955 4377 aaKnown RBP14.39□□□□□ -0.11
SMARCD3-202ENST00000356800 FGF16O43320 207 aa14.39□□□□□ -0.11
SMARCD3-202ENST00000356800 ATP6V0CP27449 155 aa14.39□□□□□ -0.11
SMARCD3-202ENST00000356800 ERHP84090 104 aaKnown RBP14.39□□□□□ -0.11
SMARCD3-202ENST00000356800 LY6EQ16553 131 aa14.39□□□□□ -0.11
SMARCD3-202ENST00000356800 C2orf83Q53S99 150 aa14.39□□□□□ -0.11
SMARCD3-202ENST00000356800 SLC7A5P1Q8MH63 180 aa14.39□□□□□ -0.11
SMARCD3-202ENST00000356800 PCNPQ8WW12 178 aaKnown RBP14.39□□□□□ -0.11
SMARCD3-202ENST00000356800 YAE1D1Q9NRH1 226 aa14.39□□□□□ -0.11
SMARCD3-202ENST00000356800 UQCC1Q9NVA1 299 aa14.39□□□□□ -0.11
SMARCD3-202ENST00000356800 IGHV4-59P01825 116 aa14.38□□□□□ -0.11
SMARCD3-202ENST00000356800 AMY1AP04745 511 aa14.38□□□□□ -0.11
SMARCD3-202ENST00000356800 SULT1A2P50226 295 aa14.38□□□□□ -0.11
SMARCD3-202ENST00000356800 CX3CL1P78423 397 aa14.38□□□□□ -0.11
SMARCD3-202ENST00000356800 NDPQ00604 133 aa14.38□□□□□ -0.11
SMARCD3-202ENST00000356800 FXYD3Q14802 87 aa14.38□□□□□ -0.11
SMARCD3-202ENST00000356800 ZNF562Q6V9R5 426 aa14.38□□□□□ -0.11
SMARCD3-202ENST00000356800 MRPL41Q8IXM3 137 aaKnown RBP14.38□□□□□ -0.11
SMARCD3-202ENST00000356800 C5orf56Q8N8D9 126 aa14.38□□□□□ -0.11
SMARCD3-202ENST00000356800 SMR3AQ99954 134 aa14.38□□□□□ -0.11
SMARCD3-202ENST00000356800 SH3BGRL3Q9H299 93 aa14.38□□□□□ -0.11
SMARCD3-202ENST00000356800 MOB4Q9Y3A3 225 aa14.38□□□□□ -0.11
SMARCD3-202ENST00000356800 CNIH1O95406 144 aa14.37□□□□□ -0.11
SMARCD3-202ENST00000356800 HLA-DRB1P01911 266 aa14.37□□□□□ -0.11
SMARCD3-202ENST00000356800 IFNA4P05014 189 aa14.37□□□□□ -0.11
SMARCD3-202ENST00000356800 APELAP0DMC3 54 aa14.37□□□□□ -0.11
SMARCD3-202ENST00000356800 RNASE2P10153 161 aaKnown RBP14.37□□□□□ -0.11
SMARCD3-202ENST00000356800 AREGP15514 252 aa14.37□□□□□ -0.11
SMARCD3-202ENST00000356800 SNCAP37840 140 aa14.37□□□□□ -0.11
SMARCD3-202ENST00000356800 IER3P46695 156 aa14.37□□□□□ -0.11
SMARCD3-202ENST00000356800 SCGB1C1Q8TD33 95 aa14.37□□□□□ -0.11
SMARCD3-202ENST00000356800 HSPB9Q9BQS6 159 aa14.37□□□□□ -0.11
SMARCD3-202ENST00000356800 WDR61Q9GZS3 305 aaKnown RBP14.37□□□□□ -0.11
SMARCD3-202ENST00000356800 PRDM13Q9H4Q3 707 aa14.37□□□□□ -0.11
SMARCD3-202ENST00000356800 PLA2G2EQ9NZK7 142 aa14.37□□□□□ -0.11
SMARCD3-202ENST00000356800 IGHV7-81A0A0B4J1V7 117 aa14.36□□□□□ -0.11
SMARCD3-202ENST00000356800 SH2D7A6NKC9 451 aaPredicted RBP14.36□□□□□ -0.11
SMARCD3-202ENST00000356800 ATP6V1G1O75348 118 aa14.36□□□□□ -0.11
SMARCD3-202ENST00000356800 REG1AP05451 166 aa14.36□□□□□ -0.11
SMARCD3-202ENST00000356800 OR13C7P0DN81 318 aa14.36□□□□□ -0.11
SMARCD3-202ENST00000356800 DLK1P80370 383 aa14.36□□□□□ -0.11
SMARCD3-202ENST00000356800 TUSC1Q2TAM9 212 aa14.36□□□□□ -0.11
SMARCD3-202ENST00000356800 SLC25A24Q6NUK1 477 aa14.36□□□□□ -0.11
SMARCD3-202ENST00000356800 SPNS3Q6ZMD2 512 aa14.36□□□□□ -0.11
SMARCD3-202ENST00000356800 SAT2Q96F10 170 aaPredicted RBP14.36□□□□□ -0.11
SMARCD3-202ENST00000356800 RASL11BQ9BPW5 248 aa14.36□□□□□ -0.11
SMARCD3-202ENST00000356800 SRSF8Q9BRL6 282 aaKnown RBP14.36□□□□□ -0.11
SMARCD3-202ENST00000356800 MED9Q9NWA0 146 aa14.36□□□□□ -0.11
SMARCD3-202ENST00000356800 MDKP21741 143 aaPredicted RBP14.36□□□□□ -0.11
SMARCD3-202ENST00000356800 RAB5CP51148 216 aa14.36□□□□□ -0.11
SMARCD3-202ENST00000356800 Q6YL49 198 aa14.36□□□□□ -0.11
SMARCD3-202ENST00000356800 HSD17B13Q7Z5P4 300 aaPredicted RBP14.36□□□□□ -0.11
SMARCD3-202ENST00000356800 TEX29Q8N6K0 151 aa14.36□□□□□ -0.11
SMARCD3-202ENST00000356800 SSMEM1Q8WWF3 244 aa14.36□□□□□ -0.11
SMARCD3-202ENST00000356800 FAM103A1Q9BTL3 118 aaKnown RBP14.36□□□□□ -0.11
SMARCD3-202ENST00000356800 FBXO7Q9Y3I1 522 aa14.36□□□□□ -0.11
SMARCD3-202ENST00000356800 UBE2L5PA0A1B0GUS4 154 aa14.35□□□□□ -0.11
SMARCD3-202ENST00000356800 EGR2P11161 476 aaPredicted RBP14.35□□□□□ -0.11
SMARCD3-202ENST00000356800 RUNX1Q01196 453 aa14.35□□□□□ -0.11
SMARCD3-202ENST00000356800 C19orf35Q6ZS72 473 aa14.35□□□□□ -0.11
SMARCD3-202ENST00000356800 OR2G3Q8NGZ4 309 aa14.35□□□□□ -0.11
SMARCD3-202ENST00000356800 ARPC1AQ92747 370 aa14.35□□□□□ -0.11
SMARCD3-202ENST00000356800 TAF15Q92804 592 aaKnown RBP eCLIP14.35□□□□□ -0.11
SMARCD3-202ENST00000356800 P2RX4Q99571 388 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms