RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 PGPEP1LA6NFU8 196 aa10.29□□□□□ -0.76
COLCA1-201ENST00000355430 C8orf88P0DMB2 117 aa10.29□□□□□ -0.76
COLCA1-201ENST00000355430 TMEM42Q69YG0 159 aa10.29□□□□□ -0.76
COLCA1-201ENST00000355430 STXBP6Q8NFX7 210 aa10.29□□□□□ -0.76
COLCA1-201ENST00000355430 IGFBP2P18065 325 aa10.29□□□□□ -0.76
COLCA1-201ENST00000355430 OTX1P32242 354 aaPredicted RBP10.29□□□□□ -0.76
COLCA1-201ENST00000355430 SGK494Q96LW2 274 aa10.29□□□□□ -0.76
COLCA1-201ENST00000355430 NPFFR1Q9GZQ6 430 aa10.29□□□□□ -0.76
COLCA1-201ENST00000355430 UQCR10Q9UDW1 63 aa10.29□□□□□ -0.76
COLCA1-201ENST00000355430 BMPR1BO00238 502 aa10.28□□□□□ -0.76
COLCA1-201ENST00000355430 NAPSAO96009 420 aa10.28□□□□□ -0.76
COLCA1-201ENST00000355430 RPL8P62917 257 aaKnown RBP10.28□□□□□ -0.76
COLCA1-201ENST00000355430 SRSF7Q16629 238 aaKnown RBP eCLIP10.28□□□□□ -0.76
COLCA1-201ENST00000355430 GCSAMLQ5JQS6 135 aa10.28□□□□□ -0.76
COLCA1-201ENST00000355430 GTF3AQ92664 365 aaKnown RBP10.28□□□□□ -0.76
COLCA1-201ENST00000355430 A0A0G2JNJ9 132 aa10.28□□□□□ -0.76
COLCA1-201ENST00000355430 IGHV3-48P01763 117 aa10.28□□□□□ -0.76
COLCA1-201ENST00000355430 ZNF146Q15072 292 aa10.28□□□□□ -0.76
COLCA1-201ENST00000355430 HCP5Q6MZN7 132 aa10.28□□□□□ -0.76
COLCA1-201ENST00000355430 Q9UFV3 132 aa10.28□□□□□ -0.76
COLCA1-201ENST00000355430 ADMP35318 185 aa10.28□□□□□ -0.76
COLCA1-201ENST00000355430 RIGQ13278 110 aa10.28□□□□□ -0.76
COLCA1-201ENST00000355430 HERPUD1Q15011 391 aa10.28□□□□□ -0.76
COLCA1-201ENST00000355430 SPSB3Q6PJ21 355 aa10.28□□□□□ -0.76
COLCA1-201ENST00000355430 IGFL3Q6UXB1 125 aa10.28□□□□□ -0.76
COLCA1-201ENST00000355430 RTTNQ86VV8 2226 aa10.28□□□□□ -0.76
COLCA1-201ENST00000355430 IGKV3-7A0A075B6H7 116 aa10.28□□□□□ -0.76
COLCA1-201ENST00000355430 TRBV9A0A0B4J1U6 114 aa10.28□□□□□ -0.76
COLCA1-201ENST00000355430 TRAV1-1A0A0B4J248 108 aa10.28□□□□□ -0.76
COLCA1-201ENST00000355430 CTAG1AP78358 180 aa10.28□□□□□ -0.76
COLCA1-201ENST00000355430 LIME1Q9H400 295 aa10.28□□□□□ -0.76
COLCA1-201ENST00000355430 DNAJC4Q9NNZ3 241 aa10.28□□□□□ -0.76
COLCA1-201ENST00000355430 TMEM242Q9NWH2 141 aa10.28□□□□□ -0.76
COLCA1-201ENST00000355430 TRBV24-1A0A075B6N3 115 aa10.28□□□□□ -0.76
COLCA1-201ENST00000355430 A0A0G2JRQ6 117 aa10.28□□□□□ -0.76
COLCA1-201ENST00000355430 FOXL2NBQ6ZUU3 175 aa10.28□□□□□ -0.76
COLCA1-201ENST00000355430 WFDC3Q8IUB2 231 aa10.28□□□□□ -0.76
COLCA1-201ENST00000355430 KIAA1549LQ6ZVL6 1849 aa10.27□□□□□ -0.76
COLCA1-201ENST00000355430 PGPA6NDG6 321 aa10.27□□□□□ -0.76
COLCA1-201ENST00000355430 HYPMO75409 117 aa10.27□□□□□ -0.76
COLCA1-201ENST00000355430 IGKV1-5P01602 117 aa10.27□□□□□ -0.76
COLCA1-201ENST00000355430 AMBPP02760 352 aa10.27□□□□□ -0.76
COLCA1-201ENST00000355430 JOSD1Q15040 202 aaPredicted RBP10.27□□□□□ -0.76
COLCA1-201ENST00000355430 ZNF430Q9H8G1 570 aaPredicted RBP10.27□□□□□ -0.76
COLCA1-201ENST00000355430 SLC25A16P16260 332 aa10.27□□□□□ -0.77
COLCA1-201ENST00000355430 GBGT1Q8N5D6 347 aa10.27□□□□□ -0.77
COLCA1-201ENST00000355430 DPM3Q9P2X0 92 aa10.27□□□□□ -0.77
COLCA1-201ENST00000355430 HIGD1AQ9Y241 93 aa10.27□□□□□ -0.77
COLCA1-201ENST00000355430 CORTO00230 105 aa10.27□□□□□ -0.77
COLCA1-201ENST00000355430 IGHG3P01860 377 aa10.27□□□□□ -0.77
COLCA1-201ENST00000355430 RND2P52198 227 aa10.27□□□□□ -0.77
COLCA1-201ENST00000355430 PGLYRP4Q96LB8 373 aa10.27□□□□□ -0.77
COLCA1-201ENST00000355430 NDUFAF3Q9BU61 184 aa10.27□□□□□ -0.77
COLCA1-201ENST00000355430 CLEC5AQ9NY25 188 aa10.27□□□□□ -0.77
COLCA1-201ENST00000355430 TMSB15BA0A087X1C1 80 aa10.27□□□□□ -0.77
COLCA1-201ENST00000355430 MBD3L4A6NDZ8 208 aaPredicted RBP10.27□□□□□ -0.77
COLCA1-201ENST00000355430 MBD3L3A6NE82 208 aaPredicted RBP10.27□□□□□ -0.77
COLCA1-201ENST00000355430 MBD3L5A6NJ08 208 aaPredicted RBP10.27□□□□□ -0.77
COLCA1-201ENST00000355430 IQCF6A8MYZ5 107 aa10.27□□□□□ -0.77
COLCA1-201ENST00000355430 NDUFS6O75380 124 aaKnown RBP10.27□□□□□ -0.77
COLCA1-201ENST00000355430 REG1AP05451 166 aa10.27□□□□□ -0.77
COLCA1-201ENST00000355430 MIR17HGQ75NE6 70 aa10.27□□□□□ -0.77
COLCA1-201ENST00000355430 FAM90A1Q86YD7 464 aa10.27□□□□□ -0.77
COLCA1-201ENST00000355430 OR8A1Q8NGG7 326 aa10.27□□□□□ -0.77
COLCA1-201ENST00000355430 MBD3L2Q8NHZ7 208 aaPredicted RBP10.27□□□□□ -0.77
COLCA1-201ENST00000355430 HSPB8Q9UJY1 196 aa10.27□□□□□ -0.77
COLCA1-201ENST00000355430 TM4SF5O14894 197 aa10.26□□□□□ -0.77
COLCA1-201ENST00000355430 OR2J3O76001 311 aa10.26□□□□□ -0.77
COLCA1-201ENST00000355430 TCTAP57738 103 aa10.26□□□□□ -0.77
COLCA1-201ENST00000355430 ATP5G2Q06055 141 aa10.26□□□□□ -0.77
COLCA1-201ENST00000355430 FOXF2Q12947 444 aa10.26□□□□□ -0.77
COLCA1-201ENST00000355430 FAM201AQ5SY85 155 aa10.26□□□□□ -0.77
COLCA1-201ENST00000355430 OR4A47Q6IF82 309 aa10.26□□□□□ -0.77
COLCA1-201ENST00000355430 H3BTX0 84 aa10.26□□□□□ -0.77
COLCA1-201ENST00000355430 COMPP49747 757 aaPredicted RBP10.26□□□□□ -0.77
COLCA1-201ENST00000355430 A8MWL6 223 aa10.26□□□□□ -0.77
COLCA1-201ENST00000355430 LILRA1O75019 489 aa10.26□□□□□ -0.77
COLCA1-201ENST00000355430 C5orf17Q8NAS9 161 aa10.26□□□□□ -0.77
COLCA1-201ENST00000355430 HS3ST6Q96QI5 342 aa10.26□□□□□ -0.77
COLCA1-201ENST00000355430 MRPL37Q9BZE1 423 aaKnown RBP10.26□□□□□ -0.77
COLCA1-201ENST00000355430 TBL2Q9Y4P3 447 aaKnown RBP10.26□□□□□ -0.77
COLCA1-201ENST00000355430 NUP210Q8TEM1 1887 aaPredicted RBP10.26□□□□□ -0.77
COLCA1-201ENST00000355430 SERF1AO75920 110 aa10.25□□□□□ -0.77
COLCA1-201ENST00000355430 OR9G9P0C7N8 305 aa10.25□□□□□ -0.77
COLCA1-201ENST00000355430 MEF2CQ06413 473 aaPredicted RBP10.25□□□□□ -0.77
COLCA1-201ENST00000355430 EBLN2Q6P2I7 272 aa10.25□□□□□ -0.77
COLCA1-201ENST00000355430 ASCL4Q6XD76 172 aa10.25□□□□□ -0.77
COLCA1-201ENST00000355430 HSPB7Q9UBY9 170 aa10.25□□□□□ -0.77
COLCA1-201ENST00000355430 PMCHL1Q16048 86 aa10.25□□□□□ -0.77
COLCA1-201ENST00000355430 C19orf35Q6ZS72 473 aa10.25□□□□□ -0.77
COLCA1-201ENST00000355430 WNT10AQ9GZT5 417 aa10.25□□□□□ -0.77
COLCA1-201ENST00000355430 PRO3102Q9H379 93 aa10.25□□□□□ -0.77
COLCA1-201ENST00000355430 RPP25LQ8N5L8 163 aaKnown RBP10.25□□□□□ -0.77
COLCA1-201ENST00000355430 METTL26Q96S19 204 aa10.25□□□□□ -0.77
COLCA1-201ENST00000355430 GPR179Q6PRD1 2367 aa10.25□□□□□ -0.77
COLCA1-201ENST00000355430 LY6G6EA0A0G2JKS1 128 aa10.25□□□□□ -0.77
COLCA1-201ENST00000355430 LOC389332A0A1B0GUA5 103 aa10.25□□□□□ -0.77
COLCA1-201ENST00000355430 IFITM10A6NMD0 228 aa10.25□□□□□ -0.77
COLCA1-201ENST00000355430 GATA2P23769 480 aaPredicted RBP10.25□□□□□ -0.77
COLCA1-201ENST00000355430 PPOXP50336 477 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms