RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 Q6ZVH6 145 aa6.86□□□□□ -1.31
HTT-201ENST00000355072 LRRC61Q9BV99 259 aa6.86□□□□□ -1.31
HTT-201ENST00000355072 C1QAP02745 245 aa6.85□□□□□ -1.31
HTT-201ENST00000355072 A0A1B0GWJ7 208 aa6.85□□□□□ -1.31
HTT-201ENST00000355072 CDKN1BP46527 198 aa6.85□□□□□ -1.31
HTT-201ENST00000355072 SRSF8Q9BRL6 282 aaKnown RBP6.85□□□□□ -1.31
HTT-201ENST00000355072 MEGF9Q9H1U4 602 aa6.85□□□□□ -1.31
HTT-201ENST00000355072 CX3CL1P78423 397 aa6.85□□□□□ -1.31
HTT-201ENST00000355072 KLK2P20151 261 aa6.85□□□□□ -1.31
HTT-201ENST00000355072 ZP1P60852 638 aa6.85□□□□□ -1.31
HTT-201ENST00000355072 TMEM144Q7Z5S9 345 aa6.85□□□□□ -1.31
HTT-201ENST00000355072 CEACAM4O75871 244 aa6.85□□□□□ -1.31
HTT-201ENST00000355072 OR2H2O95918 312 aa6.85□□□□□ -1.31
HTT-201ENST00000355072 CEACAM5P06731 702 aa6.85□□□□□ -1.31
HTT-201ENST00000355072 Q6ZS49 121 aa6.85□□□□□ -1.31
HTT-201ENST00000355072 RTN4RL2Q86UN3 420 aa6.85□□□□□ -1.31
HTT-201ENST00000355072 RPRMLQ8N4K4 120 aa6.85□□□□□ -1.31
HTT-201ENST00000355072 DUSP15Q9H1R2 295 aaPredicted RBP6.85□□□□□ -1.31
HTT-201ENST00000355072 OTOGLQ3ZCN5 2332 aa6.85□□□□□ -1.31
HTT-201ENST00000355072 TRGV8A0A0C4DH27 118 aa6.85□□□□□ -1.31
HTT-201ENST00000355072 F12P00748 615 aaPredicted RBP6.85□□□□□ -1.31
HTT-201ENST00000355072 A0A096LPE4 126 aa6.85□□□□□ -1.31
HTT-201ENST00000355072 A0A1W2PPZ6 126 aa6.85□□□□□ -1.31
HTT-201ENST00000355072 NPPCP23582 126 aa6.85□□□□□ -1.31
HTT-201ENST00000355072 MEIG1Q5JSS6 88 aa6.85□□□□□ -1.31
HTT-201ENST00000355072 FER1L6-AS1Q8NA97 138 aa6.85□□□□□ -1.31
HTT-201ENST00000355072 LINC01555Q8NAE3 123 aa6.85□□□□□ -1.31
HTT-201ENST00000355072 CCL28Q9NRJ3 127 aa6.85□□□□□ -1.31
HTT-201ENST00000355072 COL11A2P13942 1736 aaPredicted RBP6.85□□□□□ -1.31
HTT-201ENST00000355072 CXCL10P02778 98 aa6.85□□□□□ -1.31
HTT-201ENST00000355072 LINC00271P0C7V0 271 aa6.85□□□□□ -1.31
HTT-201ENST00000355072 FUT5Q11128 374 aa6.85□□□□□ -1.31
HTT-201ENST00000355072 ZDHHC16Q969W1 377 aa6.85□□□□□ -1.31
HTT-201ENST00000355072 TRAV8-6A0A0B4J262 113 aa6.85□□□□□ -1.31
HTT-201ENST00000355072 IQCF6A8MYZ5 107 aa6.85□□□□□ -1.31
HTT-201ENST00000355072 GNB2P62879 340 aa6.85□□□□□ -1.31
HTT-201ENST00000355072 SLC25A38Q96DW6 304 aa6.85□□□□□ -1.31
HTT-201ENST00000355072 RPRMQ9NS64 109 aa6.85□□□□□ -1.31
HTT-201ENST00000355072 APOHP02749 345 aaPredicted RBP6.84□□□□□ -1.31
HTT-201ENST00000355072 CTGFP29279 349 aa6.84□□□□□ -1.31
HTT-201ENST00000355072 CTHRC1Q96CG8 243 aa6.84□□□□□ -1.31
HTT-201ENST00000355072 OTORQ9NRC9 128 aa6.84□□□□□ -1.31
HTT-201ENST00000355072 PF4V1P10720 104 aa6.84□□□□□ -1.31
HTT-201ENST00000355072 RASL10BQ96S79 203 aa6.84□□□□□ -1.31
HTT-201ENST00000355072 Q0VG73 95 aa6.84□□□□□ -1.31
HTT-201ENST00000355072 ASCL4Q6XD76 172 aa6.84□□□□□ -1.31
HTT-201ENST00000355072 LINC00305Q7Z4B0 112 aa6.84□□□□□ -1.31
HTT-201ENST00000355072 C9orf40Q8IXQ3 194 aa6.84□□□□□ -1.31
HTT-201ENST00000355072 SPATA25Q9BR10 227 aa6.84□□□□□ -1.31
HTT-201ENST00000355072 NBEAP1P0C6P0 100 aa6.84□□□□□ -1.31
HTT-201ENST00000355072 SSBP3Q9BWW4 388 aaPredicted RBP6.84□□□□□ -1.31
HTT-201ENST00000355072 NHP2Q9NX24 153 aaKnown RBP6.84□□□□□ -1.31
HTT-201ENST00000355072 RNF115Q9Y4L5 304 aa6.84□□□□□ -1.31
HTT-201ENST00000355072 J3KT08 172 aa6.84□□□□□ -1.31
HTT-201ENST00000355072 PRSS53Q2L4Q9 553 aa6.84□□□□□ -1.31
HTT-201ENST00000355072 ZNF362Q5T0B9 420 aaPredicted RBP6.84□□□□□ -1.31
HTT-201ENST00000355072 EAF1Q96JC9 268 aaPredicted RBP6.84□□□□□ -1.31
HTT-201ENST00000355072 AKIRIN1Q9H9L7 192 aaPredicted RBP6.84□□□□□ -1.31
HTT-201ENST00000355072 HCFC1R1Q9NWW0 138 aa6.84□□□□□ -1.31
HTT-201ENST00000355072 A0A1W2PR80 420 aa6.84□□□□□ -1.31
HTT-201ENST00000355072 UCNP55089 124 aa6.84□□□□□ -1.31
HTT-201ENST00000355072 FGF11Q92914 225 aa6.84□□□□□ -1.31
HTT-201ENST00000355072 LOC389332A0A1B0GUA5 103 aa6.84□□□□□ -1.31
HTT-201ENST00000355072 GPX1P07203 203 aa6.84□□□□□ -1.31
HTT-201ENST00000355072 DDB2Q92466 427 aa6.84□□□□□ -1.31
HTT-201ENST00000355072 LEPROTO15243 131 aa6.84□□□□□ -1.31
HTT-201ENST00000355072 LYL1P12980 280 aa6.84□□□□□ -1.31
HTT-201ENST00000355072 HLA-DMBP28068 263 aa6.84□□□□□ -1.31
HTT-201ENST00000355072 FBXO17Q96EF6 278 aa6.84□□□□□ -1.31
HTT-201ENST00000355072 TCF19Q9Y242 345 aa6.84□□□□□ -1.31
HTT-201ENST00000355072 ZNF708P17019 499 aa6.84□□□□□ -1.31
HTT-201ENST00000355072 PPDPFLQ8WWR9 84 aa6.84□□□□□ -1.31
HTT-201ENST00000355072 TMEM74BQ9NUR3 256 aa6.84□□□□□ -1.31
HTT-201ENST00000355072 LOXL2Q9Y4K0 774 aa6.84□□□□□ -1.31
HTT-201ENST00000355072 GLMPQ8WWB7 406 aa6.84□□□□□ -1.32
HTT-201ENST00000355072 PLEKHB2Q96CS7 222 aa6.84□□□□□ -1.32
HTT-201ENST00000355072 NPFFO15130 113 aa6.84□□□□□ -1.32
HTT-201ENST00000355072 UPK3AO75631 287 aa6.84□□□□□ -1.32
HTT-201ENST00000355072 IL18BPO95998 194 aa6.84□□□□□ -1.32
HTT-201ENST00000355072 ZNF750Q32MQ0 723 aa6.84□□□□□ -1.32
HTT-201ENST00000355072 CXCL13O43927 109 aa6.83□□□□□ -1.32
HTT-201ENST00000355072 MOSP00540 346 aa6.83□□□□□ -1.32
HTT-201ENST00000355072 ZNF818PQ6ZRF7 136 aa6.83□□□□□ -1.32
HTT-201ENST00000355072 H7C2G1 150 aa6.83□□□□□ -1.32
HTT-201ENST00000355072 CDAP32320 146 aa6.83□□□□□ -1.32
HTT-201ENST00000355072 IL17RELQ6ZVW7 336 aa6.83□□□□□ -1.32
HTT-201ENST00000355072 HAPLN4Q86UW8 402 aa6.83□□□□□ -1.32
HTT-201ENST00000355072 SF3B6Q9Y3B4 125 aaKnown RBP6.83□□□□□ -1.32
HTT-201ENST00000355072 SMAD4Q13485 552 aaKnown RBP6.83□□□□□ -1.32
HTT-201ENST00000355072 MRPL14Q6P1L8 145 aaKnown RBP6.83□□□□□ -1.32
HTT-201ENST00000355072 CLEC7AQ9BXN2 247 aa6.83□□□□□ -1.32
HTT-201ENST00000355072 TNFRSF18Q9Y5U5 241 aa6.83□□□□□ -1.32
HTT-201ENST00000355072 NPIPB11E5RHQ5 1161 aa6.83□□□□□ -1.32
HTT-201ENST00000355072 MORN2Q502X0 79 aa6.83□□□□□ -1.32
HTT-201ENST00000355072 MBNL2Q5VZF2 373 aaKnown RBP6.83□□□□□ -1.32
HTT-201ENST00000355072 LINC00312Q9Y6C7 94 aa6.83□□□□□ -1.32
HTT-201ENST00000355072 EXPH5Q8NEV8 1989 aa6.83□□□□□ -1.32
HTT-201ENST00000355072 SHISA9B4DS77 424 aa6.83□□□□□ -1.32
HTT-201ENST00000355072 RPL27AP46776 148 aaKnown RBP6.83□□□□□ -1.32
HTT-201ENST00000355072 TMEM196Q5HYL7 178 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms