RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 MC5RP33032 325 aa8.36□□□□□ -1.07
SYNE1-203ENST00000354674 PAX2Q02962 417 aa8.36□□□□□ -1.07
SYNE1-203ENST00000354674 SLAQ13239 276 aa8.36□□□□□ -1.07
SYNE1-203ENST00000354674 MRPL52Q86TS9 123 aaKnown RBP8.36□□□□□ -1.07
SYNE1-203ENST00000354674 PLPPR2Q96GM1 343 aa8.36□□□□□ -1.07
SYNE1-203ENST00000354674 AGMATQ9BSE5 352 aa8.36□□□□□ -1.07
SYNE1-203ENST00000354674 CXXC4Q9H2H0 198 aa8.36□□□□□ -1.07
SYNE1-203ENST00000354674 COL6A6A6NMZ7 2263 aa8.36□□□□□ -1.07
SYNE1-203ENST00000354674 J3QT63 122 aa8.35□□□□□ -1.07
SYNE1-203ENST00000354674 HSPB6O14558 160 aa8.35□□□□□ -1.07
SYNE1-203ENST00000354674 TOX4O94842 621 aa8.35□□□□□ -1.07
SYNE1-203ENST00000354674 PAFAH1B2P68402 229 aa8.35□□□□□ -1.07
SYNE1-203ENST00000354674 FOXE3Q13461 319 aa8.35□□□□□ -1.07
SYNE1-203ENST00000354674 ADIPOQQ15848 244 aa8.35□□□□□ -1.07
SYNE1-203ENST00000354674 C11orf53Q8IXP5 236 aa8.35□□□□□ -1.07
SYNE1-203ENST00000354674 IGHV1-69-2A0A0G2JMI3 117 aa8.35□□□□□ -1.07
SYNE1-203ENST00000354674 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.35□□□□□ -1.07
SYNE1-203ENST00000354674 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.35□□□□□ -1.07
SYNE1-203ENST00000354674 NPPCP23582 126 aa8.35□□□□□ -1.07
SYNE1-203ENST00000354674 PSMB3P49720 205 aa8.35□□□□□ -1.07
SYNE1-203ENST00000354674 ERVK11-1P61568 191 aa8.35□□□□□ -1.07
SYNE1-203ENST00000354674 ARL16Q0P5N6 197 aa8.35□□□□□ -1.07
SYNE1-203ENST00000354674 STUMQ69YW2 141 aa8.35□□□□□ -1.07
SYNE1-203ENST00000354674 OSR2Q8N2R0 312 aa8.35□□□□□ -1.07
SYNE1-203ENST00000354674 SCCPDHQ8NBX0 429 aa8.35□□□□□ -1.07
SYNE1-203ENST00000354674 OR4A5Q8NH83 315 aa8.35□□□□□ -1.07
SYNE1-203ENST00000354674 BORCS7Q96B45 105 aa8.35□□□□□ -1.07
SYNE1-203ENST00000354674 MSI2Q96DH6 328 aaKnown RBP8.35□□□□□ -1.07
SYNE1-203ENST00000354674 CLEC7AQ9BXN2 247 aa8.35□□□□□ -1.07
SYNE1-203ENST00000354674 TECRQ9NZ01 308 aaKnown RBP8.35□□□□□ -1.07
SYNE1-203ENST00000354674 NAT8BQ9UHF3 227 aa8.35□□□□□ -1.07
SYNE1-203ENST00000354674 DEFB108AA8MXU0 73 aa8.34□□□□□ -1.07
SYNE1-203ENST00000354674 SYNGR1O43759 233 aa8.34□□□□□ -1.07
SYNE1-203ENST00000354674 PPIAL4GP0DN37 164 aa8.34□□□□□ -1.07
SYNE1-203ENST00000354674 MDH2P40926 338 aaKnown RBP8.34□□□□□ -1.07
SYNE1-203ENST00000354674 NPBWR2P48146 333 aa8.34□□□□□ -1.07
SYNE1-203ENST00000354674 MEF2CQ06413 473 aaPredicted RBP8.34□□□□□ -1.07
SYNE1-203ENST00000354674 DUSP13Q9UII6 198 aa8.34□□□□□ -1.07
SYNE1-203ENST00000354674 CLEC18AA5D8T8 446 aa8.34□□□□□ -1.07
SYNE1-203ENST00000354674 FAM90A10PA6NDY2 464 aa8.34□□□□□ -1.07
SYNE1-203ENST00000354674 FAM90A18PA6NE21 464 aa8.34□□□□□ -1.07
SYNE1-203ENST00000354674 FAM90A16PA6NEW6 464 aa8.34□□□□□ -1.07
SYNE1-203ENST00000354674 FAM90A20PA6NIJ5 464 aa8.34□□□□□ -1.07
SYNE1-203ENST00000354674 FAM90A8PA6NJQ4 464 aa8.34□□□□□ -1.07
SYNE1-203ENST00000354674 FAM90A7PA6NKC0 464 aa8.34□□□□□ -1.07
SYNE1-203ENST00000354674 FAM90A22PA8MWA6 464 aa8.34□□□□□ -1.07
SYNE1-203ENST00000354674 FAM90A12PA8MX19 464 aa8.34□□□□□ -1.07
SYNE1-203ENST00000354674 FAM90A5PA8MXJ8 464 aa8.34□□□□□ -1.07
SYNE1-203ENST00000354674 FAM90A23PA8MXZ1 464 aa8.34□□□□□ -1.07
SYNE1-203ENST00000354674 APOA2P02652 100 aa8.34□□□□□ -1.07
SYNE1-203ENST00000354674 ADH4P08319 380 aa8.34□□□□□ -1.07
SYNE1-203ENST00000354674 FAM90A15PP0C7V4 464 aa8.34□□□□□ -1.07
SYNE1-203ENST00000354674 FAM90A13PP0C7W8 464 aa8.34□□□□□ -1.07
SYNE1-203ENST00000354674 FAM90A14PP0C7W9 464 aa8.34□□□□□ -1.07
SYNE1-203ENST00000354674 FAM90A24PP0C7X0 464 aa8.34□□□□□ -1.07
SYNE1-203ENST00000354674 IGFBP2P18065 325 aa8.34□□□□□ -1.07
SYNE1-203ENST00000354674 BCL3P20749 454 aa8.34□□□□□ -1.07
SYNE1-203ENST00000354674 RBM11P57052 281 aaKnown RBP8.34□□□□□ -1.07
SYNE1-203ENST00000354674 FGF12P61328 243 aa8.34□□□□□ -1.07
SYNE1-203ENST00000354674 MZT1Q08AG7 82 aa8.34□□□□□ -1.07
SYNE1-203ENST00000354674 SPANXN5Q5MJ07 72 aa8.34□□□□□ -1.07
SYNE1-203ENST00000354674 RPP25LQ8N5L8 163 aaKnown RBP8.34□□□□□ -1.07
SYNE1-203ENST00000354674 KLHDC1Q8N7A1 406 aa8.34□□□□□ -1.07
SYNE1-203ENST00000354674 CLEC18CQ8NCF0 446 aa8.34□□□□□ -1.07
SYNE1-203ENST00000354674 SS18L2Q9UHA2 77 aa8.34□□□□□ -1.07
SYNE1-203ENST00000354674 HILPDAQ9Y5L2 63 aa8.34□□□□□ -1.07
SYNE1-203ENST00000354674 ATP23Q9Y6H3 246 aa8.34□□□□□ -1.07
SYNE1-203ENST00000354674 CD3EP07766 207 aa8.34□□□□□ -1.07
SYNE1-203ENST00000354674 ATP5G3P48201 142 aa8.34□□□□□ -1.07
SYNE1-203ENST00000354674 CKS1BP61024 79 aa8.34□□□□□ -1.07
SYNE1-203ENST00000354674 HLA-DRB5Q30154 266 aa8.34□□□□□ -1.07
SYNE1-203ENST00000354674 KIR3DL3Q8N743 410 aa8.34□□□□□ -1.07
SYNE1-203ENST00000354674 TAAR3PQ9P1P4 343 aa8.34□□□□□ -1.07
SYNE1-203ENST00000354674 ANXA10Q9UJ72 324 aa8.34□□□□□ -1.07
SYNE1-203ENST00000354674 PCNX1Q96RV3 2341 aa8.33□□□□□ -1.08
SYNE1-203ENST00000354674 E7EQL1 145 aa8.33□□□□□ -1.08
SYNE1-203ENST00000354674 RHBDL1O75783 438 aa8.33□□□□□ -1.08
SYNE1-203ENST00000354674 IFNA1P01562 189 aa8.33□□□□□ -1.08
SYNE1-203ENST00000354674 MRPL54Q6P161 138 aaKnown RBP8.33□□□□□ -1.08
SYNE1-203ENST00000354674 OR2Z1Q8NG97 314 aa8.33□□□□□ -1.08
SYNE1-203ENST00000354674 OR4F17Q8NGA8 305 aa8.33□□□□□ -1.08
SYNE1-203ENST00000354674 OR51H1Q8NH63 302 aa8.33□□□□□ -1.08
SYNE1-203ENST00000354674 WDR61Q9GZS3 305 aaKnown RBP8.33□□□□□ -1.08
SYNE1-203ENST00000354674 HES4Q9HCC6 221 aa8.33□□□□□ -1.08
SYNE1-203ENST00000354674 POLDIP2Q9Y2S7 368 aa8.33□□□□□ -1.08
SYNE1-203ENST00000354674 A0A1B0GV72 72 aa8.33□□□□□ -1.08
SYNE1-203ENST00000354674 A0A1W2PS18 150 aa8.33□□□□□ -1.08
SYNE1-203ENST00000354674 SH2D7A6NKC9 451 aaPredicted RBP8.33□□□□□ -1.08
SYNE1-203ENST00000354674 CEACAM18A8MTB9 384 aa8.33□□□□□ -1.08
SYNE1-203ENST00000354674 TRAPPC2LH3BP13 241 aa8.33□□□□□ -1.08
SYNE1-203ENST00000354674 ZNF16P17020 682 aaPredicted RBP8.33□□□□□ -1.08
SYNE1-203ENST00000354674 GATA4P43694 442 aa8.33□□□□□ -1.08
SYNE1-203ENST00000354674 PIGYQ3MUY2 71 aa8.33□□□□□ -1.08
SYNE1-203ENST00000354674 PRSS57Q6UWY2 283 aa8.33□□□□□ -1.08
SYNE1-203ENST00000354674 TMEM144Q7Z5S9 345 aa8.33□□□□□ -1.08
SYNE1-203ENST00000354674 LINC00596Q86U02 117 aa8.33□□□□□ -1.08
SYNE1-203ENST00000354674 Q8IYB0 196 aa8.33□□□□□ -1.08
SYNE1-203ENST00000354674 PERPQ96FX8 193 aa8.33□□□□□ -1.08
SYNE1-203ENST00000354674 C18orf12Q96KH6 178 aa8.33□□□□□ -1.08
SYNE1-203ENST00000354674 HS3ST6Q96QI5 342 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms