RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 C8orf88P0DMB2 117 aa9.36□□□□□ -0.91
CAPN9-202ENST00000354537 SRIP30626 198 aa9.36□□□□□ -0.91
CAPN9-202ENST00000354537 DOLPP1Q86YN1 238 aa9.36□□□□□ -0.91
CAPN9-202ENST00000354537 C11orf42Q8N5U0 333 aa9.36□□□□□ -0.91
CAPN9-202ENST00000354537 TMEM105Q8N8V8 129 aa9.36□□□□□ -0.91
CAPN9-202ENST00000354537 OR1L8Q8NGR8 309 aa9.36□□□□□ -0.91
CAPN9-202ENST00000354537 PLEKHA3Q9HB20 300 aa9.36□□□□□ -0.91
CAPN9-202ENST00000354537 DUSP13Q9UII6 198 aa9.36□□□□□ -0.91
CAPN9-202ENST00000354537 LAMA1P25391 3075 aa9.36□□□□□ -0.91
CAPN9-202ENST00000354537 UPK2O00526 184 aa9.36□□□□□ -0.91
CAPN9-202ENST00000354537 SIAH2O43255 324 aa9.36□□□□□ -0.91
CAPN9-202ENST00000354537 LAMTOR5O43504 91 aa9.36□□□□□ -0.91
CAPN9-202ENST00000354537 IGHG3P01860 377 aa9.36□□□□□ -0.91
CAPN9-202ENST00000354537 HNRNPA3P51991 378 aaKnown RBP9.36□□□□□ -0.91
CAPN9-202ENST00000354537 ARG2P78540 354 aa9.36□□□□□ -0.91
CAPN9-202ENST00000354537 FAM162BQ5T6X4 162 aa9.36□□□□□ -0.91
CAPN9-202ENST00000354537 CYB5R2Q6BCY4 276 aa9.36□□□□□ -0.91
CAPN9-202ENST00000354537 TMPRSS7Q7RTY8 843 aa9.36□□□□□ -0.91
CAPN9-202ENST00000354537 MBD6Q96DN6 1003 aa9.36□□□□□ -0.91
CAPN9-202ENST00000354537 TXN2Q99757 166 aa9.36□□□□□ -0.91
CAPN9-202ENST00000354537 RNASE7Q9H1E1 156 aaKnown RBP9.36□□□□□ -0.91
CAPN9-202ENST00000354537 BATFQ16520 125 aa9.35□□□□□ -0.91
CAPN9-202ENST00000354537 CT45A1Q5HYN5 189 aa9.35□□□□□ -0.91
CAPN9-202ENST00000354537 RNFT1Q5M7Z0 435 aa9.35□□□□□ -0.91
CAPN9-202ENST00000354537 CT45A3Q8NHU0 189 aa9.35□□□□□ -0.91
CAPN9-202ENST00000354537 CACNG8Q8WXS5 425 aa9.35□□□□□ -0.91
CAPN9-202ENST00000354537 RCHY1Q96PM5 261 aa9.35□□□□□ -0.91
CAPN9-202ENST00000354537 SLC25A33Q9BSK2 321 aa9.35□□□□□ -0.91
CAPN9-202ENST00000354537 DOCK11Q5JSL3 2073 aa9.35□□□□□ -0.91
CAPN9-202ENST00000354537 GGTLC3B5MD39 225 aa9.34□□□□□ -0.91
CAPN9-202ENST00000354537 INS-IGF2F8WCM5 200 aa9.34□□□□□ -0.91
CAPN9-202ENST00000354537 J3QR06 171 aa9.34□□□□□ -0.91
CAPN9-202ENST00000354537 CECR9P0C854 216 aa9.34□□□□□ -0.91
CAPN9-202ENST00000354537 PMCHP20382 165 aa9.34□□□□□ -0.91
CAPN9-202ENST00000354537 USF1P22415 310 aaPredicted RBP9.34□□□□□ -0.91
CAPN9-202ENST00000354537 FABP6P51161 128 aa9.34□□□□□ -0.91
CAPN9-202ENST00000354537 MMDQ15546 238 aa9.34□□□□□ -0.91
CAPN9-202ENST00000354537 C17orf58Q2M2W7 97 aa9.34□□□□□ -0.91
CAPN9-202ENST00000354537 STUMQ69YW2 141 aa9.34□□□□□ -0.91
CAPN9-202ENST00000354537 Q6ZN92 141 aa9.34□□□□□ -0.91
CAPN9-202ENST00000354537 GRAMD2BQ96HH9 432 aa9.34□□□□□ -0.91
CAPN9-202ENST00000354537 OR2V2Q96R30 315 aa9.34□□□□□ -0.91
CAPN9-202ENST00000354537 FAM234AQ9H0X4 552 aa9.34□□□□□ -0.91
CAPN9-202ENST00000354537 LINC00574Q9H8X3 128 aa9.34□□□□□ -0.91
CAPN9-202ENST00000354537 KBTBD11-OT1A0A1B0GTJ5 212 aa9.34□□□□□ -0.91
CAPN9-202ENST00000354537 OR2J3O76001 311 aa9.34□□□□□ -0.91
CAPN9-202ENST00000354537 ACTL6BO94805 426 aa9.34□□□□□ -0.91
CAPN9-202ENST00000354537 DMRTA1Q5VZB9 504 aa9.34□□□□□ -0.91
CAPN9-202ENST00000354537 OR2D3Q8NGH3 330 aa9.34□□□□□ -0.91
CAPN9-202ENST00000354537 C18orf32Q8TCD1 76 aa9.34□□□□□ -0.91
CAPN9-202ENST00000354537 ZNF714Q96N38 554 aa9.34□□□□□ -0.91
CAPN9-202ENST00000354537 DNAJC4Q9NNZ3 241 aa9.34□□□□□ -0.91
CAPN9-202ENST00000354537 IGHV2OR16-5A0A0B4J2B6 119 aa9.33□□□□□ -0.92
CAPN9-202ENST00000354537 OR7C2O60412 319 aa9.33□□□□□ -0.92
CAPN9-202ENST00000354537 AGFG2O95081 481 aa9.33□□□□□ -0.92
CAPN9-202ENST00000354537 LHBP01229 141 aa9.33□□□□□ -0.92
CAPN9-202ENST00000354537 SAA2P0DJI9 122 aaPredicted RBP9.33□□□□□ -0.92
CAPN9-202ENST00000354537 HOXA4Q00056 320 aaPredicted RBP9.33□□□□□ -0.92
CAPN9-202ENST00000354537 C1orf229Q6ZS94 237 aaPredicted RBP9.33□□□□□ -0.92
CAPN9-202ENST00000354537 STPG4Q8N801 248 aa9.33□□□□□ -0.92
CAPN9-202ENST00000354537 SMIM12Q96EX1 92 aa9.33□□□□□ -0.92
CAPN9-202ENST00000354537 NDUFB8O95169 186 aa9.33□□□□□ -0.92
CAPN9-202ENST00000354537 TOMM40O96008 361 aa9.33□□□□□ -0.92
CAPN9-202ENST00000354537 FXYD3Q14802 87 aa9.33□□□□□ -0.92
CAPN9-202ENST00000354537 KIAA1644Q3SXP7 199 aa9.33□□□□□ -0.92
CAPN9-202ENST00000354537 ATP5L2Q7Z4Y8 100 aa9.33□□□□□ -0.92
CAPN9-202ENST00000354537 FAM222BQ8WU58 562 aa9.33□□□□□ -0.92
CAPN9-202ENST00000354537 TRIB1Q96RU8 372 aa9.33□□□□□ -0.92
CAPN9-202ENST00000354537 SAP30LQ9HAJ7 183 aa9.33□□□□□ -0.92
CAPN9-202ENST00000354537 BET1LQ9NYM9 111 aa9.33□□□□□ -0.92
CAPN9-202ENST00000354537 C1RLQ9NZP8 487 aa9.33□□□□□ -0.92
CAPN9-202ENST00000354537 YLPM1P49750 1951 aaKnown RBP9.33□□□□□ -0.92
CAPN9-202ENST00000354537 TRAV9-2A0A087WT02 112 aa9.32□□□□□ -0.92
CAPN9-202ENST00000354537 IGHV2-26A0A0B4J1V2 119 aa9.32□□□□□ -0.92
CAPN9-202ENST00000354537 PSMB11A5LHX3 300 aa9.32□□□□□ -0.92
CAPN9-202ENST00000354537 AHRRA9YTQ3 701 aa9.32□□□□□ -0.92
CAPN9-202ENST00000354537 KIR2DL2P43627 348 aaPredicted RBP9.32□□□□□ -0.92
CAPN9-202ENST00000354537 KLF3P57682 345 aaPredicted RBP9.32□□□□□ -0.92
CAPN9-202ENST00000354537 CD69Q07108 199 aa9.32□□□□□ -0.92
CAPN9-202ENST00000354537 TBR1Q16650 682 aa9.32□□□□□ -0.92
CAPN9-202ENST00000354537 OR2Z1Q8NG97 314 aa9.32□□□□□ -0.92
CAPN9-202ENST00000354537 OR8B3Q8NGG8 313 aa9.32□□□□□ -0.92
CAPN9-202ENST00000354537 OR8B2Q96RD0 313 aa9.32□□□□□ -0.92
CAPN9-202ENST00000354537 PLSCR4Q9NRQ2 329 aa9.32□□□□□ -0.92
CAPN9-202ENST00000354537 IGKV1OR2-108A0A075B7D4 117 aa9.32□□□□□ -0.92
CAPN9-202ENST00000354537 TEX50A0A1B0GTY4 177 aa9.32□□□□□ -0.92
CAPN9-202ENST00000354537 MGST1P10620 155 aaKnown RBP9.32□□□□□ -0.92
CAPN9-202ENST00000354537 TSPOP30536 169 aa9.32□□□□□ -0.92
CAPN9-202ENST00000354537 MRPL54Q6P161 138 aaKnown RBP9.32□□□□□ -0.92
CAPN9-202ENST00000354537 SPACA3Q8IXA5 215 aa9.32□□□□□ -0.92
CAPN9-202ENST00000354537 PLPPR2Q96GM1 343 aa9.32□□□□□ -0.92
CAPN9-202ENST00000354537 FAM167A-AS1Q96KT0 104 aa9.32□□□□□ -0.92
CAPN9-202ENST00000354537 GCM1Q9NP62 436 aa9.32□□□□□ -0.92
CAPN9-202ENST00000354537 SERTAD4Q9NUC0 356 aa9.32□□□□□ -0.92
CAPN9-202ENST00000354537 DKK4Q9UBT3 224 aa9.32□□□□□ -0.92
CAPN9-202ENST00000354537 IGHV1-18A0A0C4DH31 117 aa9.31□□□□□ -0.92
CAPN9-202ENST00000354537 A0A1W2PNU3 283 aaPredicted RBP9.31□□□□□ -0.92
CAPN9-202ENST00000354537 SPINK4O60575 86 aa9.31□□□□□ -0.92
CAPN9-202ENST00000354537 RNASE2P10153 161 aaKnown RBP9.31□□□□□ -0.92
CAPN9-202ENST00000354537 TFPI2P48307 235 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms