RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 HELTA6NFD8 242 aa20.04■□□□□ 0.8
CPNE1-202ENST00000352393 WT1P19544 449 aaPredicted RBP20.04■□□□□ 0.8
CPNE1-202ENST00000352393 CD33P20138 364 aa20.04■□□□□ 0.8
CPNE1-202ENST00000352393 CRYBB3P26998 211 aa20.04■□□□□ 0.8
CPNE1-202ENST00000352393 TOMM20LQ6UXN7 152 aa20.04■□□□□ 0.8
CPNE1-202ENST00000352393 OR8I2Q8N0Y5 310 aa20.04■□□□□ 0.8
CPNE1-202ENST00000352393 LINC00574Q9H8X3 128 aa20.04■□□□□ 0.8
CPNE1-202ENST00000352393 F2Z2F3 143 aa20.03■□□□□ 0.8
CPNE1-202ENST00000352393 GNG10P50151 68 aa20.03■□□□□ 0.8
CPNE1-202ENST00000352393 ALKBH2Q6NS38 261 aa20.03■□□□□ 0.8
CPNE1-202ENST00000352393 GAFA1Q96PS6 74 aa20.03■□□□□ 0.8
CPNE1-202ENST00000352393 OR5G3P0C626 314 aa20.03■□□□□ 0.8
CPNE1-202ENST00000352393 TIMM23BQ5SRD1 257 aa20.03■□□□□ 0.8
CPNE1-202ENST00000352393 PNKDQ8N490 385 aa20.03■□□□□ 0.8
CPNE1-202ENST00000352393 ST6GALNAC3Q8NDV1 305 aa20.03■□□□□ 0.8
CPNE1-202ENST00000352393 C20orf144Q9BQM9 153 aa20.03■□□□□ 0.8
CPNE1-202ENST00000352393 HSPB9Q9BQS6 159 aa20.03■□□□□ 0.8
CPNE1-202ENST00000352393 NBEAQ8NFP9 2946 aa20.03■□□□□ 0.8
CPNE1-202ENST00000352393 C2orf83Q53S99 150 aa20.02■□□□□ 0.8
CPNE1-202ENST00000352393 VHLLQ6RSH7 139 aa20.02■□□□□ 0.8
CPNE1-202ENST00000352393 PQLC2Q6ZP29 291 aa20.02■□□□□ 0.8
CPNE1-202ENST00000352393 OSTCQ9NRP0 149 aa20.02■□□□□ 0.8
CPNE1-202ENST00000352393 RNF7Q9UBF6 113 aa20.02■□□□□ 0.8
CPNE1-202ENST00000352393 DSPP15924 2871 aaKnown RBP20.02■□□□□ 0.8
CPNE1-202ENST00000352393 GGTLC3B5MD39 225 aa20.02■□□□□ 0.79
CPNE1-202ENST00000352393 CT45A6P0DMU7 189 aa20.02■□□□□ 0.79
CPNE1-202ENST00000352393 CT45A5P0DMU8 189 aa20.02■□□□□ 0.79
CPNE1-202ENST00000352393 CT45A7P0DMV0 189 aa20.02■□□□□ 0.79
CPNE1-202ENST00000352393 BAGE3Q86Y29 109 aa20.02■□□□□ 0.79
CPNE1-202ENST00000352393 BAGE2Q86Y30 109 aa20.02■□□□□ 0.79
CPNE1-202ENST00000352393 CADP27708 2225 aa20.01■□□□□ 0.79
CPNE1-202ENST00000352393 MMP23AO75900 390 aa20.01■□□□□ 0.79
CPNE1-202ENST00000352393 IGKV1-16P04430 117 aa20.01■□□□□ 0.79
CPNE1-202ENST00000352393 TDGF1P3P51864 188 aa20.01■□□□□ 0.79
CPNE1-202ENST00000352393 ATP5IP56385 69 aaPredicted RBP20.01■□□□□ 0.79
CPNE1-202ENST00000352393 CX3CL1P78423 397 aa20.01■□□□□ 0.79
CPNE1-202ENST00000352393 SLC25A48Q6ZT89 311 aaKnown RBP20.01■□□□□ 0.79
CPNE1-202ENST00000352393 DOLPP1Q86YN1 238 aa20.01■□□□□ 0.79
CPNE1-202ENST00000352393 GCM1Q9NP62 436 aa20.01■□□□□ 0.79
CPNE1-202ENST00000352393 SLC35D1Q9NTN3 355 aa20.01■□□□□ 0.79
CPNE1-202ENST00000352393 TEX50A0A1B0GTY4 177 aa20■□□□□ 0.79
CPNE1-202ENST00000352393 SRRM4A7MD48 611 aaKnown RBP20■□□□□ 0.79
CPNE1-202ENST00000352393 MT-ND6P03923 174 aa20■□□□□ 0.79
CPNE1-202ENST00000352393 CDKN1AP38936 164 aa20■□□□□ 0.79
CPNE1-202ENST00000352393 TMEM30BQ3MIR4 351 aa20■□□□□ 0.79
CPNE1-202ENST00000352393 C3orf36Q3SXR2 165 aa20■□□□□ 0.79
CPNE1-202ENST00000352393 ZNF474Q6S9Z5 364 aaPredicted RBP20■□□□□ 0.79
CPNE1-202ENST00000352393 OR5AU1Q8NGC0 362 aa20■□□□□ 0.79
CPNE1-202ENST00000352393 ATG101Q9BSB4 218 aa20■□□□□ 0.79
CPNE1-202ENST00000352393 C19orf24Q9BVV8 132 aa20■□□□□ 0.79
CPNE1-202ENST00000352393 BDP1A6H8Y1 2624 aa20■□□□□ 0.79
CPNE1-202ENST00000352393 GATA2P23769 480 aaPredicted RBP20■□□□□ 0.79
CPNE1-202ENST00000352393 RTL8BQ17RB0 113 aa20■□□□□ 0.79
CPNE1-202ENST00000352393 RPUSD1Q9UJJ7 312 aaKnown RBP20■□□□□ 0.79
CPNE1-202ENST00000352393 TNCP24821 2201 aa20■□□□□ 0.79
CPNE1-202ENST00000352393 OR7C2O60412 319 aa19.99■□□□□ 0.79
CPNE1-202ENST00000352393 IGLV2-8P01709 118 aa19.99■□□□□ 0.79
CPNE1-202ENST00000352393 RNASE2P10153 161 aaKnown RBP19.99■□□□□ 0.79
CPNE1-202ENST00000352393 TIGITQ495A1 244 aa19.99■□□□□ 0.79
CPNE1-202ENST00000352393 WDR73Q6P4I2 378 aa19.99■□□□□ 0.79
CPNE1-202ENST00000352393 MRPL52Q86TS9 123 aaKnown RBP19.99■□□□□ 0.79
CPNE1-202ENST00000352393 OR1L8Q8NGR8 309 aa19.99■□□□□ 0.79
CPNE1-202ENST00000352393 RNASE7Q9H1E1 156 aaKnown RBP19.99■□□□□ 0.79
CPNE1-202ENST00000352393 COMPP49747 757 aaPredicted RBP19.99■□□□□ 0.79
CPNE1-202ENST00000352393 TAS2R45P59539 299 aa19.99■□□□□ 0.79
CPNE1-202ENST00000352393 TDRG1Q3Y452 100 aa19.99■□□□□ 0.79
CPNE1-202ENST00000352393 TMEM136Q6ZRR5 245 aa19.99■□□□□ 0.79
CPNE1-202ENST00000352393 FAM216BQ8N7L0 139 aa19.99■□□□□ 0.79
CPNE1-202ENST00000352393 IGF2BP2-AS1Q96M15 143 aa19.99■□□□□ 0.79
CPNE1-202ENST00000352393 GNB4Q9HAV0 340 aa19.99■□□□□ 0.79
CPNE1-202ENST00000352393 ASCL3Q9NQ33 180 aa19.99■□□□□ 0.79
CPNE1-202ENST00000352393 BET1LQ9NYM9 111 aa19.99■□□□□ 0.79
CPNE1-202ENST00000352393 ZNF788Q6ZQV5 615 aa19.98■□□□□ 0.79
CPNE1-202ENST00000352393 OR5B3Q8NH48 314 aa19.98■□□□□ 0.79
CPNE1-202ENST00000352393 OR9G1Q8NH87 305 aa19.98■□□□□ 0.79
CPNE1-202ENST00000352393 CCL13Q99616 98 aa19.98■□□□□ 0.79
CPNE1-202ENST00000352393 PARD6AQ9NPB6 346 aa19.98■□□□□ 0.79
CPNE1-202ENST00000352393 A0A1W2PRE2 83 aa19.97■□□□□ 0.79
CPNE1-202ENST00000352393 ISLRO14498 428 aa19.97■□□□□ 0.79
CPNE1-202ENST00000352393 TM4SF5O14894 197 aa19.97■□□□□ 0.79
CPNE1-202ENST00000352393 IGHV1-46P01743 117 aa19.97■□□□□ 0.79
CPNE1-202ENST00000352393 SAA1P0DJI8 122 aaPredicted RBP19.97■□□□□ 0.79
CPNE1-202ENST00000352393 ZNF124Q15973 351 aa19.97■□□□□ 0.79
CPNE1-202ENST00000352393 SAMD10Q9BYL1 202 aa19.97■□□□□ 0.79
CPNE1-202ENST00000352393 RPL19P84098 196 aaKnown RBP19.97■□□□□ 0.79
CPNE1-202ENST00000352393 TNFAIP6P98066 277 aaPredicted RBP19.97■□□□□ 0.79
CPNE1-202ENST00000352393 CD69Q07108 199 aa19.97■□□□□ 0.79
CPNE1-202ENST00000352393 TMEM183BQ1AE95 376 aa19.97■□□□□ 0.79
CPNE1-202ENST00000352393 COX19Q49B96 90 aa19.97■□□□□ 0.79
CPNE1-202ENST00000352393 DEFB108BQ8NET1 73 aa19.97■□□□□ 0.79
CPNE1-202ENST00000352393 ZNRD1Q9P1U0 126 aa19.97■□□□□ 0.79
CPNE1-202ENST00000352393 NAT8BQ9UHF3 227 aa19.97■□□□□ 0.79
CPNE1-202ENST00000352393 PPOXP50336 477 aa19.96■□□□□ 0.79
CPNE1-202ENST00000352393 FXYD3Q14802 87 aa19.96■□□□□ 0.79
CPNE1-202ENST00000352393 SLC25A33Q9BSK2 321 aa19.96■□□□□ 0.79
CPNE1-202ENST00000352393 C8orf88P0DMB2 117 aa19.96■□□□□ 0.79
CPNE1-202ENST00000352393 MIEN1Q9BRT3 115 aa19.96■□□□□ 0.79
CPNE1-202ENST00000352393 MRPL32Q9BYC8 188 aaKnown RBP19.96■□□□□ 0.79
CPNE1-202ENST00000352393 RNF114Q9Y508 228 aa19.96■□□□□ 0.79
CPNE1-202ENST00000352393 SPENQ96T58 3664 aaKnown RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms