RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 SGMS2Q8NHU3 365 aa12.62□□□□□ -0.39
TNFSF13-202ENST00000349228 OCC1Q8TAD7 63 aa12.62□□□□□ -0.39
TNFSF13-202ENST00000349228 VSTM2AQ8TAG5 236 aa12.62□□□□□ -0.39
TNFSF13-202ENST00000349228 TMEM18Q96B42 140 aa12.62□□□□□ -0.39
TNFSF13-202ENST00000349228 ZNF714Q96N38 554 aa12.62□□□□□ -0.39
TNFSF13-202ENST00000349228 NABP2Q9BQ15 211 aa12.62□□□□□ -0.39
TNFSF13-202ENST00000349228 TRAPPC1Q9Y5R8 145 aa12.62□□□□□ -0.39
TNFSF13-202ENST00000349228 OTOGLQ3ZCN5 2332 aa12.62□□□□□ -0.39
TNFSF13-202ENST00000349228 DIDO1Q9BTC0 2240 aaKnown RBP12.62□□□□□ -0.39
TNFSF13-202ENST00000349228 PPIAL4EA0A075B759 164 aa12.62□□□□□ -0.39
TNFSF13-202ENST00000349228 A0A0G2JNJ9 132 aa12.62□□□□□ -0.39
TNFSF13-202ENST00000349228 A0A1W2PN81 502 aa12.62□□□□□ -0.39
TNFSF13-202ENST00000349228 SRRM4A7MD48 611 aaKnown RBP12.62□□□□□ -0.39
TNFSF13-202ENST00000349228 PPIAL4DF5H284 164 aa12.62□□□□□ -0.39
TNFSF13-202ENST00000349228 PPIAL4FP0DN26 164 aa12.62□□□□□ -0.39
TNFSF13-202ENST00000349228 USF1P22415 310 aaPredicted RBP12.62□□□□□ -0.39
TNFSF13-202ENST00000349228 TEX38Q6PEX7 206 aa12.62□□□□□ -0.39
TNFSF13-202ENST00000349228 ZNF596Q8TC21 504 aa12.62□□□□□ -0.39
TNFSF13-202ENST00000349228 Q9UFV3 132 aa12.62□□□□□ -0.39
TNFSF13-202ENST00000349228 PPIAL4AQ9Y536 164 aa12.62□□□□□ -0.39
TNFSF13-202ENST00000349228 PRR14LQ5THK1 2151 aa12.62□□□□□ -0.39
TNFSF13-202ENST00000349228 HCFC1P51610 2035 aa12.61□□□□□ -0.39
TNFSF13-202ENST00000349228 WDFY4Q6ZS81 3184 aa12.61□□□□□ -0.39
TNFSF13-202ENST00000349228 TRBV20OR9-2A0A075B6H5 130 aa12.61□□□□□ -0.39
TNFSF13-202ENST00000349228 DPRXA6NFQ7 191 aa12.61□□□□□ -0.39
TNFSF13-202ENST00000349228 TSTD3H0UI37 97 aa12.61□□□□□ -0.39
TNFSF13-202ENST00000349228 K7EM74 188 aa12.61□□□□□ -0.39
TNFSF13-202ENST00000349228 IGKV1-16P04430 117 aa12.61□□□□□ -0.39
TNFSF13-202ENST00000349228 SAA1P0DJI8 122 aaPredicted RBP12.61□□□□□ -0.39
TNFSF13-202ENST00000349228 RNASE2P10153 161 aaKnown RBP12.61□□□□□ -0.39
TNFSF13-202ENST00000349228 YPEL3P61236 119 aaPredicted RBP12.61□□□□□ -0.39
TNFSF13-202ENST00000349228 CCL8P80075 99 aa12.61□□□□□ -0.39
TNFSF13-202ENST00000349228 CLEC12BQ2HXU8 276 aa12.61□□□□□ -0.39
TNFSF13-202ENST00000349228 ZNF114Q8NC26 417 aa12.61□□□□□ -0.39
TNFSF13-202ENST00000349228 LRFN3Q9BTN0 628 aa12.61□□□□□ -0.39
TNFSF13-202ENST00000349228 COMMD5Q9GZQ3 224 aa12.61□□□□□ -0.39
TNFSF13-202ENST00000349228 JKAMPQ9P055 326 aa12.61□□□□□ -0.39
TNFSF13-202ENST00000349228 MUC3AQ02505 3323 aa12.61□□□□□ -0.39
TNFSF13-202ENST00000349228 TMEM178BH3BS89 294 aa12.61□□□□□ -0.39
TNFSF13-202ENST00000349228 OR5G3P0C626 314 aa12.61□□□□□ -0.39
TNFSF13-202ENST00000349228 RNF224P0DH78 156 aa12.61□□□□□ -0.39
TNFSF13-202ENST00000349228 PF4V1P10720 104 aa12.61□□□□□ -0.39
TNFSF13-202ENST00000349228 RPL19P84098 196 aaKnown RBP12.61□□□□□ -0.39
TNFSF13-202ENST00000349228 DEFA6Q01524 100 aa12.61□□□□□ -0.39
TNFSF13-202ENST00000349228 CD69Q07108 199 aa12.61□□□□□ -0.39
TNFSF13-202ENST00000349228 SPATA31B1PQ5VZV4 182 aa12.61□□□□□ -0.39
TNFSF13-202ENST00000349228 WFDC8Q8IUA0 241 aa12.61□□□□□ -0.39
TNFSF13-202ENST00000349228 TMEM186Q96B77 213 aa12.61□□□□□ -0.39
TNFSF13-202ENST00000349228 FLYWCH2Q96CP2 140 aaKnown RBP12.61□□□□□ -0.39
TNFSF13-202ENST00000349228 MRPL32Q9BYC8 188 aaKnown RBP12.61□□□□□ -0.39
TNFSF13-202ENST00000349228 NDUFA4L2Q9NRX3 87 aa12.61□□□□□ -0.39
TNFSF13-202ENST00000349228 IL36BQ9NZH7 164 aa12.61□□□□□ -0.39
TNFSF13-202ENST00000349228 H0YJW9 148 aa12.6□□□□□ -0.39
TNFSF13-202ENST00000349228 DLL1O00548 723 aa12.6□□□□□ -0.39
TNFSF13-202ENST00000349228 NDUFB3O43676 98 aa12.6□□□□□ -0.39
TNFSF13-202ENST00000349228 TDGF1P3P51864 188 aa12.6□□□□□ -0.39
TNFSF13-202ENST00000349228 RPL8P62917 257 aaKnown RBP12.6□□□□□ -0.39
TNFSF13-202ENST00000349228 GAMTQ14353 236 aa12.6□□□□□ -0.39
TNFSF13-202ENST00000349228 LRRC10Q5BKY1 277 aa12.6□□□□□ -0.39
TNFSF13-202ENST00000349228 PDPNQ86YL7 162 aa12.6□□□□□ -0.39
TNFSF13-202ENST00000349228 OR4C13Q8NGP0 309 aa12.6□□□□□ -0.39
TNFSF13-202ENST00000349228 TMEM167AQ8TBQ9 72 aa12.6□□□□□ -0.39
TNFSF13-202ENST00000349228 HARBI1Q96MB7 349 aa12.6□□□□□ -0.39
TNFSF13-202ENST00000349228 SAP30LQ9HAJ7 183 aa12.6□□□□□ -0.39
TNFSF13-202ENST00000349228 NGBQ9NPG2 151 aa12.6□□□□□ -0.39
TNFSF13-202ENST00000349228 TNFRSF13BO14836 293 aaPredicted RBP12.59□□□□□ -0.39
TNFSF13-202ENST00000349228 FOXH1O75593 365 aa12.59□□□□□ -0.39
TNFSF13-202ENST00000349228 SUB1P53999 127 aaKnown RBP eCLIP12.59□□□□□ -0.39
TNFSF13-202ENST00000349228 TMEM200BQ69YZ2 307 aa12.59□□□□□ -0.39
TNFSF13-202ENST00000349228 MRPL20Q9BYC9 149 aaKnown RBP12.59□□□□□ -0.39
TNFSF13-202ENST00000349228 CACNA1HO95180 2353 aa12.59□□□□□ -0.39
TNFSF13-202ENST00000349228 OR10J4P0C629 311 aa12.59□□□□□ -0.39
TNFSF13-202ENST00000349228 MYOD1P15172 320 aa12.59□□□□□ -0.39
TNFSF13-202ENST00000349228 G0S2P27469 103 aa12.59□□□□□ -0.39
TNFSF13-202ENST00000349228 OR10J1P30954 320 aa12.59□□□□□ -0.39
TNFSF13-202ENST00000349228 PSG5Q15238 335 aa12.59□□□□□ -0.39
TNFSF13-202ENST00000349228 MIR17HGQ75NE6 70 aa12.59□□□□□ -0.39
TNFSF13-202ENST00000349228 EAF1Q96JC9 268 aaPredicted RBP12.59□□□□□ -0.39
TNFSF13-202ENST00000349228 A0A1W2PRE2 83 aa12.58□□□□□ -0.4
TNFSF13-202ENST00000349228 HELTA6NFD8 242 aa12.58□□□□□ -0.4
TNFSF13-202ENST00000349228 GZMBP10144 247 aa12.58□□□□□ -0.4
TNFSF13-202ENST00000349228 BSPH1Q075Z2 132 aa12.58□□□□□ -0.4
TNFSF13-202ENST00000349228 HLA-DRB5Q30154 266 aa12.58□□□□□ -0.4
TNFSF13-202ENST00000349228 CDPF1Q6NVV7 123 aa12.58□□□□□ -0.4
TNFSF13-202ENST00000349228 AURKAIP1Q9NWT8 199 aaPredicted RBP12.58□□□□□ -0.4
TNFSF13-202ENST00000349228 KAAG1Q9UBP8 84 aa12.58□□□□□ -0.4
TNFSF13-202ENST00000349228 ZNF835Q9Y2P0 537 aa12.58□□□□□ -0.4
TNFSF13-202ENST00000349228 DSCAMO60469 2012 aa12.58□□□□□ -0.4
TNFSF13-202ENST00000349228 PGPEP1LA6NFU8 196 aa12.57□□□□□ -0.4
TNFSF13-202ENST00000349228 THBDP07204 575 aa12.57□□□□□ -0.4
TNFSF13-202ENST00000349228 C8orf88P0DMB2 117 aa12.57□□□□□ -0.4
TNFSF13-202ENST00000349228 MC5RP33032 325 aa12.57□□□□□ -0.4
TNFSF13-202ENST00000349228 ZNF137PP52743 207 aa12.57□□□□□ -0.4
TNFSF13-202ENST00000349228 ZNF90Q03938 601 aa12.57□□□□□ -0.4
TNFSF13-202ENST00000349228 TCF15Q12870 199 aa12.57□□□□□ -0.4
TNFSF13-202ENST00000349228 TM4SF20Q53R12 229 aa12.57□□□□□ -0.4
TNFSF13-202ENST00000349228 GBGT1Q8N5D6 347 aa12.57□□□□□ -0.4
TNFSF13-202ENST00000349228 OR10X1Q8NGY0 326 aa12.57□□□□□ -0.4
TNFSF13-202ENST00000349228 SNRNP40Q96DI7 357 aaKnown RBP12.57□□□□□ -0.4
TNFSF13-202ENST00000349228 TMEM106BQ9NUM4 274 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms