RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 OR10J1P30954 320 aa14.77□□□□□ -0.04
PTP4A3-202ENST00000349124 Q6ZWC4 215 aa14.77□□□□□ -0.04
PTP4A3-202ENST00000349124 OR8I2Q8N0Y5 310 aa14.77□□□□□ -0.04
PTP4A3-202ENST00000349124 GAFA1Q96PS6 74 aa14.77□□□□□ -0.04
PTP4A3-202ENST00000349124 AKAP13Q12802 2813 aa14.77□□□□□ -0.05
PTP4A3-202ENST00000349124 SERF1AO75920 110 aa14.77□□□□□ -0.05
PTP4A3-202ENST00000349124 IGHV1-46P01743 117 aa14.77□□□□□ -0.05
PTP4A3-202ENST00000349124 RAB31Q13636 194 aa14.77□□□□□ -0.05
PTP4A3-202ENST00000349124 MORN5Q5VZ52 161 aa14.77□□□□□ -0.05
PTP4A3-202ENST00000349124 OR1L6Q8NGR2 347 aa14.77□□□□□ -0.05
PTP4A3-202ENST00000349124 CMTM2Q8TAZ6 248 aa14.77□□□□□ -0.05
PTP4A3-202ENST00000349124 TXNDC17Q9BRA2 123 aa14.77□□□□□ -0.05
PTP4A3-202ENST00000349124 C2orf88Q9BSF0 95 aa14.77□□□□□ -0.05
PTP4A3-202ENST00000349124 RNF7Q9UBF6 113 aa14.77□□□□□ -0.05
PTP4A3-202ENST00000349124 NAGKQ9UJ70 344 aa14.77□□□□□ -0.05
PTP4A3-202ENST00000349124 PIEZO2Q9H5I5 2752 aa14.76□□□□□ -0.05
PTP4A3-202ENST00000349124 TEX50A0A1B0GTY4 177 aa14.76□□□□□ -0.05
PTP4A3-202ENST00000349124 E7EUB6 86 aa14.76□□□□□ -0.05
PTP4A3-202ENST00000349124 FCN1O00602 326 aa14.76□□□□□ -0.05
PTP4A3-202ENST00000349124 REG1BP48304 166 aa14.76□□□□□ -0.05
PTP4A3-202ENST00000349124 TCL1AP56279 114 aa14.76□□□□□ -0.05
PTP4A3-202ENST00000349124 TNFAIP6P98066 277 aaPredicted RBP14.76□□□□□ -0.05
PTP4A3-202ENST00000349124 KIAA1644Q3SXP7 199 aa14.76□□□□□ -0.05
PTP4A3-202ENST00000349124 CENPWQ5EE01 88 aa14.76□□□□□ -0.05
PTP4A3-202ENST00000349124 MMD2Q8IY49 270 aa14.76□□□□□ -0.05
PTP4A3-202ENST00000349124 ST6GALNAC3Q8NDV1 305 aa14.76□□□□□ -0.05
PTP4A3-202ENST00000349124 TRAV5A0A0B4J249 113 aa14.76□□□□□ -0.05
PTP4A3-202ENST00000349124 MBD3L4A6NDZ8 208 aaPredicted RBP14.76□□□□□ -0.05
PTP4A3-202ENST00000349124 MBD3L3A6NE82 208 aaPredicted RBP14.76□□□□□ -0.05
PTP4A3-202ENST00000349124 MBD3L5A6NJ08 208 aaPredicted RBP14.76□□□□□ -0.05
PTP4A3-202ENST00000349124 OR7C2O60412 319 aa14.76□□□□□ -0.05
PTP4A3-202ENST00000349124 LGALS4P56470 323 aa14.76□□□□□ -0.05
PTP4A3-202ENST00000349124 CCL8P80075 99 aa14.76□□□□□ -0.05
PTP4A3-202ENST00000349124 MBD3L2Q8NHZ7 208 aaPredicted RBP14.76□□□□□ -0.05
PTP4A3-202ENST00000349124 TBX15Q96SF7 602 aa14.76□□□□□ -0.05
PTP4A3-202ENST00000349124 SNHG12Q9BXW3 62 aa14.76□□□□□ -0.05
PTP4A3-202ENST00000349124 PLEKHA3Q9HB20 300 aa14.76□□□□□ -0.05
PTP4A3-202ENST00000349124 V9GYV3 84 aa14.76□□□□□ -0.05
PTP4A3-202ENST00000349124 HELTA6NFD8 242 aa14.75□□□□□ -0.05
PTP4A3-202ENST00000349124 PLXNB1O43157 2135 aa14.75□□□□□ -0.05
PTP4A3-202ENST00000349124 SUMO1P63165 101 aaKnown RBP14.75□□□□□ -0.05
PTP4A3-202ENST00000349124 TIMM23BQ5SRD1 257 aa14.75□□□□□ -0.05
PTP4A3-202ENST00000349124 STUMQ69YW2 141 aa14.75□□□□□ -0.05
PTP4A3-202ENST00000349124 SLC35D1Q9NTN3 355 aa14.75□□□□□ -0.05
PTP4A3-202ENST00000349124 ABCA1O95477 2261 aa14.75□□□□□ -0.05
PTP4A3-202ENST00000349124 K7EM74 188 aa14.75□□□□□ -0.05
PTP4A3-202ENST00000349124 UPK2O00526 184 aa14.75□□□□□ -0.05
PTP4A3-202ENST00000349124 CRISP2P16562 243 aa14.75□□□□□ -0.05
PTP4A3-202ENST00000349124 OR2T6Q8NHC8 308 aa14.75□□□□□ -0.05
PTP4A3-202ENST00000349124 C11orf52Q96A22 123 aa14.75□□□□□ -0.05
PTP4A3-202ENST00000349124 LINC00479Q96M42 142 aa14.75□□□□□ -0.05
PTP4A3-202ENST00000349124 UHRF2Q96PU4 802 aa14.75□□□□□ -0.05
PTP4A3-202ENST00000349124 PARD6AQ9NPB6 346 aa14.75□□□□□ -0.05
PTP4A3-202ENST00000349124 IGLV3-9A0A075B6K5 115 aa14.74□□□□□ -0.05
PTP4A3-202ENST00000349124 SNURFLB1AK76 121 aa14.74□□□□□ -0.05
PTP4A3-202ENST00000349124 GGTLC3B5MD39 225 aa14.74□□□□□ -0.05
PTP4A3-202ENST00000349124 CDKN1AP38936 164 aa14.74□□□□□ -0.05
PTP4A3-202ENST00000349124 SSBP2P81877 361 aaPredicted RBP14.74□□□□□ -0.05
PTP4A3-202ENST00000349124 NHLRC2Q8NBF2 726 aa14.74□□□□□ -0.05
PTP4A3-202ENST00000349124 FAM169BQ8N8A8 192 aa14.74□□□□□ -0.05
PTP4A3-202ENST00000349124 FAM222BQ8WU58 562 aa14.74□□□□□ -0.05
PTP4A3-202ENST00000349124 RNF114Q9Y508 228 aa14.74□□□□□ -0.05
PTP4A3-202ENST00000349124 DSCAML1Q8TD84 2053 aa14.73□□□□□ -0.05
PTP4A3-202ENST00000349124 SAA1P0DJI8 122 aaPredicted RBP14.73□□□□□ -0.05
PTP4A3-202ENST00000349124 GNG4P50150 75 aa14.73□□□□□ -0.05
PTP4A3-202ENST00000349124 BEND2Q8NDZ0 799 aa14.73□□□□□ -0.05
PTP4A3-202ENST00000349124 HSPB9Q9BQS6 159 aa14.73□□□□□ -0.05
PTP4A3-202ENST00000349124 CA1P00915 261 aaPredicted RBP14.73□□□□□ -0.05
PTP4A3-202ENST00000349124 CCL3L1P16619 93 aa14.73□□□□□ -0.05
PTP4A3-202ENST00000349124 PRCDQ00LT1 54 aa14.73□□□□□ -0.05
PTP4A3-202ENST00000349124 DIAPH2-AS1Q14236 149 aa14.73□□□□□ -0.05
PTP4A3-202ENST00000349124 TMEM106BQ9NUM4 274 aa14.73□□□□□ -0.05
PTP4A3-202ENST00000349124 TACC2O95359 2948 aa14.73□□□□□ -0.05
PTP4A3-202ENST00000349124 BSNQ9UPA5 3926 aa14.72□□□□□ -0.05
PTP4A3-202ENST00000349124 MT-CO2P00403 227 aa14.72□□□□□ -0.05
PTP4A3-202ENST00000349124 AREGP15514 252 aa14.72□□□□□ -0.05
PTP4A3-202ENST00000349124 SELENOTP62341 195 aa14.72□□□□□ -0.05
PTP4A3-202ENST00000349124 C1orf194Q5T5A4 169 aa14.72□□□□□ -0.05
PTP4A3-202ENST00000349124 PIP4P1Q86T03 277 aa14.72□□□□□ -0.05
PTP4A3-202ENST00000349124 BTF3L4Q96K17 158 aa14.72□□□□□ -0.05
PTP4A3-202ENST00000349124 PRNDQ9UKY0 176 aa14.72□□□□□ -0.05
PTP4A3-202ENST00000349124 ITGB1BP1O14713 200 aa14.72□□□□□ -0.05
PTP4A3-202ENST00000349124 CHRNB4P30926 498 aa14.72□□□□□ -0.05
PTP4A3-202ENST00000349124 TOMM20LQ6UXN7 152 aa14.72□□□□□ -0.05
PTP4A3-202ENST00000349124 ZNF788Q6ZQV5 615 aa14.72□□□□□ -0.05
PTP4A3-202ENST00000349124 LHFPL4Q7Z7J7 247 aa14.72□□□□□ -0.05
PTP4A3-202ENST00000349124 BAGE3Q86Y29 109 aa14.72□□□□□ -0.05
PTP4A3-202ENST00000349124 BAGE2Q86Y30 109 aa14.72□□□□□ -0.05
PTP4A3-202ENST00000349124 C1orf174Q8IYL3 243 aa14.72□□□□□ -0.05
PTP4A3-202ENST00000349124 MRPL20Q9BYC9 149 aaKnown RBP14.72□□□□□ -0.05
PTP4A3-202ENST00000349124 RPUSD1Q9UJJ7 312 aaKnown RBP14.72□□□□□ -0.05
PTP4A3-202ENST00000349124 NAV3Q8IVL0 2385 aa14.72□□□□□ -0.05
PTP4A3-202ENST00000349124 A8MXE2 369 aa14.72□□□□□ -0.05
PTP4A3-202ENST00000349124 C9JCJ5 164 aa14.72□□□□□ -0.05
PTP4A3-202ENST00000349124 FCN3O75636 299 aa14.72□□□□□ -0.05
PTP4A3-202ENST00000349124 RPEL1Q2QD12 228 aa14.72□□□□□ -0.05
PTP4A3-202ENST00000349124 C10orf55Q5SWW7 151 aa14.72□□□□□ -0.05
PTP4A3-202ENST00000349124 SLC25A48Q6ZT89 311 aaKnown RBP14.72□□□□□ -0.05
PTP4A3-202ENST00000349124 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.72□□□□□ -0.05
PTP4A3-202ENST00000349124 FAM103A1Q9BTL3 118 aaKnown RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms