RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 IGKV1-16P04430 117 aa12.57□□□□□ -0.4
RAB5C-201ENST00000346213 P0C879 139 aa12.57□□□□□ -0.4
RAB5C-201ENST00000346213 PDLIM3Q53GG5 364 aaPredicted RBP12.57□□□□□ -0.4
RAB5C-201ENST00000346213 KPRPQ5T749 579 aaPredicted RBP12.57□□□□□ -0.4
RAB5C-201ENST00000346213 PCNPQ8WW12 178 aaKnown RBP12.57□□□□□ -0.4
RAB5C-201ENST00000346213 MED9Q9NWA0 146 aa12.57□□□□□ -0.4
RAB5C-201ENST00000346213 ZMAT5Q9UDW3 170 aaKnown RBP12.57□□□□□ -0.4
RAB5C-201ENST00000346213 CACNG5Q9UF02 275 aa12.57□□□□□ -0.4
RAB5C-201ENST00000346213 FBXL17Q9UF56 701 aa12.57□□□□□ -0.4
RAB5C-201ENST00000346213 TSSC4Q9Y5U2 329 aaPredicted RBP12.57□□□□□ -0.4
RAB5C-201ENST00000346213 G3V318 75 aa12.57□□□□□ -0.4
RAB5C-201ENST00000346213 RPLP1P05386 114 aaKnown RBP12.57□□□□□ -0.4
RAB5C-201ENST00000346213 VAMP2P63027 116 aa12.57□□□□□ -0.4
RAB5C-201ENST00000346213 SSBP2P81877 361 aaPredicted RBP12.57□□□□□ -0.4
RAB5C-201ENST00000346213 C8orf86Q6ZUL3 223 aa12.57□□□□□ -0.4
RAB5C-201ENST00000346213 OR2C3Q8N628 320 aa12.57□□□□□ -0.4
RAB5C-201ENST00000346213 OR5AN1Q8NGI8 311 aa12.57□□□□□ -0.4
RAB5C-201ENST00000346213 MAGT1Q9H0U3 335 aa12.57□□□□□ -0.4
RAB5C-201ENST00000346213 FAM90A26D6RGX4 464 aa12.56□□□□□ -0.4
RAB5C-201ENST00000346213 WRBO00258 174 aa12.56□□□□□ -0.4
RAB5C-201ENST00000346213 RAB29O14966 203 aa12.56□□□□□ -0.4
RAB5C-201ENST00000346213 ATP6V0E1O15342 81 aa12.56□□□□□ -0.4
RAB5C-201ENST00000346213 RBFOX2O43251 390 aaKnown RBP eCLIP12.56□□□□□ -0.4
RAB5C-201ENST00000346213 SSSCA1O60232 199 aa12.56□□□□□ -0.4
RAB5C-201ENST00000346213 JTBO76095 146 aa12.56□□□□□ -0.4
RAB5C-201ENST00000346213 S1PR2O95136 353 aa12.56□□□□□ -0.4
RAB5C-201ENST00000346213 EGR2P11161 476 aaPredicted RBP12.56□□□□□ -0.4
RAB5C-201ENST00000346213 IGLL1P15814 213 aa12.56□□□□□ -0.4
RAB5C-201ENST00000346213 RPL23AP62750 156 aaKnown RBP12.56□□□□□ -0.4
RAB5C-201ENST00000346213 IZUMO4Q1ZYL8 232 aa12.56□□□□□ -0.4
RAB5C-201ENST00000346213 C19orf54Q5BKX5 351 aa12.56□□□□□ -0.4
RAB5C-201ENST00000346213 OR2B11Q5JQS5 317 aa12.56□□□□□ -0.4
RAB5C-201ENST00000346213 KHDC1LQ5JSQ8 128 aa12.56□□□□□ -0.4
RAB5C-201ENST00000346213 TOR2AQ5JU69 321 aa12.56□□□□□ -0.4
RAB5C-201ENST00000346213 RPL7L1Q6DKI1 246 aaKnown RBP12.56□□□□□ -0.4
RAB5C-201ENST00000346213 FAM71F2Q6NXP2 309 aa12.56□□□□□ -0.4
RAB5C-201ENST00000346213 NPBQ8NG41 125 aa12.56□□□□□ -0.4
RAB5C-201ENST00000346213 OR4X2Q8NGF9 303 aa12.56□□□□□ -0.4
RAB5C-201ENST00000346213 SLC25A31Q9H0C2 315 aa12.56□□□□□ -0.4
RAB5C-201ENST00000346213 FBXL15Q9H469 300 aa12.56□□□□□ -0.4
RAB5C-201ENST00000346213 LYRM2Q9NU23 88 aaPredicted RBP12.56□□□□□ -0.4
RAB5C-201ENST00000346213 NOTCH3Q9UM47 2321 aa12.56□□□□□ -0.4
RAB5C-201ENST00000346213 M0R1X1 148 aa12.55□□□□□ -0.4
RAB5C-201ENST00000346213 NBR2O15453 112 aa12.55□□□□□ -0.4
RAB5C-201ENST00000346213 SOX15O60248 233 aa12.55□□□□□ -0.4
RAB5C-201ENST00000346213 RRASP10301 218 aa12.55□□□□□ -0.4
RAB5C-201ENST00000346213 KIAA0141Q14154 515 aaPredicted RBP12.55□□□□□ -0.4
RAB5C-201ENST00000346213 C5orf64Q2M2E5 130 aa12.55□□□□□ -0.4
RAB5C-201ENST00000346213 DEFB136Q30KP8 78 aa12.55□□□□□ -0.4
RAB5C-201ENST00000346213 RAB40CQ96S21 281 aa12.55□□□□□ -0.4
RAB5C-201ENST00000346213 RASL11BQ9BPW5 248 aa12.55□□□□□ -0.4
RAB5C-201ENST00000346213 KLK15Q9H2R5 256 aa12.55□□□□□ -0.4
RAB5C-201ENST00000346213 FAM24AA6NFZ4 105 aa12.54□□□□□ -0.4
RAB5C-201ENST00000346213 AP4M1O00189 453 aa12.54□□□□□ -0.4
RAB5C-201ENST00000346213 PPIFP30405 207 aaKnown RBP12.54□□□□□ -0.4
RAB5C-201ENST00000346213 KIR2DS2P43631 304 aa12.54□□□□□ -0.4
RAB5C-201ENST00000346213 EWSR1Q01844 656 aaKnown RBP eCLIP12.54□□□□□ -0.4
RAB5C-201ENST00000346213 MRGPRG-AS1Q2M3A8 158 aa12.54□□□□□ -0.4
RAB5C-201ENST00000346213 LINC00482Q8N8I6 264 aa12.54□□□□□ -0.4
RAB5C-201ENST00000346213 WFDC9Q8NEX5 89 aa12.54□□□□□ -0.4
RAB5C-201ENST00000346213 BSCL2Q96G97 398 aaPredicted RBP12.54□□□□□ -0.4
RAB5C-201ENST00000346213 PRELID3BQ9Y3B1 194 aa12.54□□□□□ -0.4
RAB5C-201ENST00000346213 WSB1Q9Y6I7 421 aa12.54□□□□□ -0.4
RAB5C-201ENST00000346213 SYNGR2O43760 224 aa12.54□□□□□ -0.4
RAB5C-201ENST00000346213 TMEM50AO95807 157 aa12.54□□□□□ -0.4
RAB5C-201ENST00000346213 HPRT1P00492 218 aa12.54□□□□□ -0.4
RAB5C-201ENST00000346213 KRASP01116 189 aa12.54□□□□□ -0.4
RAB5C-201ENST00000346213 HLA-DRB1P01911 266 aa12.54□□□□□ -0.4
RAB5C-201ENST00000346213 IGF1P05019 195 aa12.54□□□□□ -0.4
RAB5C-201ENST00000346213 G6PCP35575 357 aa12.54□□□□□ -0.4
RAB5C-201ENST00000346213 PAX9P55771 341 aa12.54□□□□□ -0.4
RAB5C-201ENST00000346213 NHLH2Q02577 135 aa12.54□□□□□ -0.4
RAB5C-201ENST00000346213 FAM74A1Q5RGS3 127 aa12.54□□□□□ -0.4
RAB5C-201ENST00000346213 COMMD7Q86VX2 200 aa12.54□□□□□ -0.4
RAB5C-201ENST00000346213 TMEM252Q8N6L7 170 aa12.54□□□□□ -0.4
RAB5C-201ENST00000346213 UBAC2Q8NBM4 344 aa12.54□□□□□ -0.4
RAB5C-201ENST00000346213 OR4F17Q8NGA8 305 aa12.54□□□□□ -0.4
RAB5C-201ENST00000346213 DDB2Q92466 427 aa12.54□□□□□ -0.4
RAB5C-201ENST00000346213 ADTRPQ96IZ2 230 aa12.54□□□□□ -0.4
RAB5C-201ENST00000346213 OR4F4Q96R69 305 aa12.54□□□□□ -0.4
RAB5C-201ENST00000346213 ARV1Q9H2C2 271 aa12.54□□□□□ -0.4
RAB5C-201ENST00000346213 IGSF23A1L1A6 192 aa12.53□□□□□ -0.4
RAB5C-201ENST00000346213 IGLV2-23P01705 113 aa12.53□□□□□ -0.4
RAB5C-201ENST00000346213 THBS3P49746 956 aa12.53□□□□□ -0.4
RAB5C-201ENST00000346213 CAV2P51636 162 aa12.53□□□□□ -0.4
RAB5C-201ENST00000346213 B2MP61769 119 aa12.53□□□□□ -0.4
RAB5C-201ENST00000346213 EIF5AL1Q6IS14 154 aaKnown RBP12.53□□□□□ -0.4
RAB5C-201ENST00000346213 MRPL41Q8IXM3 137 aaKnown RBP12.53□□□□□ -0.4
RAB5C-201ENST00000346213 RNF152Q8N8N0 203 aa12.53□□□□□ -0.4
RAB5C-201ENST00000346213 MYOZ3Q8TDC0 251 aa12.53□□□□□ -0.4
RAB5C-201ENST00000346213 RAX2Q96IS3 184 aa12.53□□□□□ -0.4
RAB5C-201ENST00000346213 SMIM3Q9BZL3 60 aa12.53□□□□□ -0.4
RAB5C-201ENST00000346213 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.53□□□□□ -0.4
RAB5C-201ENST00000346213 BORCS7-ASMTA0A0B4J1R7 106 aa12.52□□□□□ -0.4
RAB5C-201ENST00000346213 RRHO14718 337 aa12.52□□□□□ -0.4
RAB5C-201ENST00000346213 FCGR3BO75015 233 aa12.52□□□□□ -0.4
RAB5C-201ENST00000346213 NXPH3O95157 252 aa12.52□□□□□ -0.4
RAB5C-201ENST00000346213 PSMB8P28062 276 aa12.52□□□□□ -0.4
RAB5C-201ENST00000346213 BAXQ07812 192 aa12.52□□□□□ -0.4
RAB5C-201ENST00000346213 PSG5Q15238 335 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms