RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 ZNF491Q8N8L2 437 aa9.23□□□□□ -0.93
SNCA-202ENST00000345009 NECAP1Q8NC96 275 aa9.23□□□□□ -0.93
SNCA-202ENST00000345009 OR52E5Q8NH55 327 aa9.23□□□□□ -0.93
SNCA-202ENST00000345009 GPR146Q96CH1 333 aa9.23□□□□□ -0.93
SNCA-202ENST00000345009 KLK15Q9H2R5 256 aa9.23□□□□□ -0.93
SNCA-202ENST00000345009 GPN1Q9HCN4 374 aaPredicted RBP9.23□□□□□ -0.93
SNCA-202ENST00000345009 CACNG5Q9UF02 275 aa9.23□□□□□ -0.93
SNCA-202ENST00000345009 IGLC7A0M8Q6 106 aa9.22□□□□□ -0.93
SNCA-202ENST00000345009 E7EUB6 86 aa9.22□□□□□ -0.93
SNCA-202ENST00000345009 ST8SIA3O43173 380 aa9.22□□□□□ -0.93
SNCA-202ENST00000345009 PF4P02776 101 aa9.22□□□□□ -0.93
SNCA-202ENST00000345009 SLC25A6P12236 298 aa9.22□□□□□ -0.93
SNCA-202ENST00000345009 MYOD1P15172 320 aa9.22□□□□□ -0.93
SNCA-202ENST00000345009 AREGP15514 252 aa9.22□□□□□ -0.93
SNCA-202ENST00000345009 CTRB1P17538 263 aa9.22□□□□□ -0.93
SNCA-202ENST00000345009 ATP5G2Q06055 141 aa9.22□□□□□ -0.93
SNCA-202ENST00000345009 SMCO1Q147U7 214 aa9.22□□□□□ -0.93
SNCA-202ENST00000345009 IZUMO4Q1ZYL8 232 aa9.22□□□□□ -0.93
SNCA-202ENST00000345009 ANKRD55Q3KP44 614 aa9.22□□□□□ -0.93
SNCA-202ENST00000345009 NMSQ5H8A3 153 aa9.22□□□□□ -0.93
SNCA-202ENST00000345009 CTRB2Q6GPI1 263 aa9.22□□□□□ -0.93
SNCA-202ENST00000345009 LCNL1Q6ZST4 164 aa9.22□□□□□ -0.93
SNCA-202ENST00000345009 NRARPQ7Z6K4 114 aa9.22□□□□□ -0.93
SNCA-202ENST00000345009 OR1S1Q8NH92 325 aa9.22□□□□□ -0.93
SNCA-202ENST00000345009 MYOZ3Q8TDC0 251 aa9.22□□□□□ -0.93
SNCA-202ENST00000345009 C4orf3Q8WVX3 66 aa9.22□□□□□ -0.93
SNCA-202ENST00000345009 PRR13Q9NZ81 148 aa9.22□□□□□ -0.93
SNCA-202ENST00000345009 ANK2Q01484 3957 aa9.22□□□□□ -0.93
SNCA-202ENST00000345009 NOTCH3Q9UM47 2321 aa9.22□□□□□ -0.93
SNCA-202ENST00000345009 VWFP04275 2813 aa9.22□□□□□ -0.93
SNCA-202ENST00000345009 PKD1L1Q8TDX9 2849 aa9.22□□□□□ -0.93
SNCA-202ENST00000345009 MGAM2Q2M2H8 2515 aa9.22□□□□□ -0.93
SNCA-202ENST00000345009 PRAF2O60831 178 aa9.21□□□□□ -0.94
SNCA-202ENST00000345009 HOXB5P09067 269 aa9.21□□□□□ -0.94
SNCA-202ENST00000345009 MYCNOSP40205 109 aa9.21□□□□□ -0.94
SNCA-202ENST00000345009 HOXA1P49639 335 aaPredicted RBP9.21□□□□□ -0.94
SNCA-202ENST00000345009 RHOGP84095 191 aa9.21□□□□□ -0.94
SNCA-202ENST00000345009 AARDQ4LEZ3 155 aa9.21□□□□□ -0.94
SNCA-202ENST00000345009 PRR31Q5SQ13 230 aa9.21□□□□□ -0.94
SNCA-202ENST00000345009 Q6ZRM9 215 aa9.21□□□□□ -0.94
SNCA-202ENST00000345009 OR10W1Q8NGF6 305 aa9.21□□□□□ -0.94
SNCA-202ENST00000345009 ZNF431Q8TF32 576 aaPredicted RBP9.21□□□□□ -0.94
SNCA-202ENST00000345009 MITD1Q8WV92 249 aa9.21□□□□□ -0.94
SNCA-202ENST00000345009 DPF1Q92782 380 aa9.21□□□□□ -0.94
SNCA-202ENST00000345009 HIPK2Q9H2X6 1198 aa9.21□□□□□ -0.94
SNCA-202ENST00000345009 TRBV9A0A0B4J1U6 114 aa9.2□□□□□ -0.94
SNCA-202ENST00000345009 A0A0G2JRQ6 117 aa9.2□□□□□ -0.94
SNCA-202ENST00000345009 A0A1B0GW64 132 aa9.2□□□□□ -0.94
SNCA-202ENST00000345009 CGB1A6NKQ9 187 aa9.2□□□□□ -0.94
SNCA-202ENST00000345009 DBX1A6NMT0 343 aa9.2□□□□□ -0.94
SNCA-202ENST00000345009 CEBPZOSA8MTT3 80 aa9.2□□□□□ -0.94
SNCA-202ENST00000345009 INMT-MINDY4F8WBC2 141 aa9.2□□□□□ -0.94
SNCA-202ENST00000345009 MED6O75586 246 aa9.2□□□□□ -0.94
SNCA-202ENST00000345009 PTTG1O95997 202 aa9.2□□□□□ -0.94
SNCA-202ENST00000345009 IL5P05113 134 aa9.2□□□□□ -0.94
SNCA-202ENST00000345009 REG1AP05451 166 aa9.2□□□□□ -0.94
SNCA-202ENST00000345009 RUNX1Q01196 453 aa9.2□□□□□ -0.94
SNCA-202ENST00000345009 WT1-ASQ06250 92 aa9.2□□□□□ -0.94
SNCA-202ENST00000345009 DCTN2Q13561 401 aaKnown RBP9.2□□□□□ -0.94
SNCA-202ENST00000345009 XP32Q5T750 250 aa9.2□□□□□ -0.94
SNCA-202ENST00000345009 SLC25A24Q6NUK1 477 aa9.2□□□□□ -0.94
SNCA-202ENST00000345009 NOXA1Q86UR1 476 aa9.2□□□□□ -0.94
SNCA-202ENST00000345009 OR2C3Q8N628 320 aa9.2□□□□□ -0.94
SNCA-202ENST00000345009 UXS1Q8NBZ7 420 aa9.2□□□□□ -0.94
SNCA-202ENST00000345009 OR1P1Q8NH06 330 aa9.2□□□□□ -0.94
SNCA-202ENST00000345009 CXorf58Q96LI9 332 aa9.2□□□□□ -0.94
SNCA-202ENST00000345009 RANGRFQ9HD47 186 aaPredicted RBP9.2□□□□□ -0.94
SNCA-202ENST00000345009 HEYLQ9NQ87 328 aaPredicted RBP9.2□□□□□ -0.94
SNCA-202ENST00000345009 FBXL7Q9UJT9 491 aa9.2□□□□□ -0.94
SNCA-202ENST00000345009 F11RQ9Y624 299 aaKnown RBP9.2□□□□□ -0.94
SNCA-202ENST00000345009 DNHD1Q96M86 4753 aa9.2□□□□□ -0.94
SNCA-202ENST00000345009 FAM90A26D6RGX4 464 aa9.19□□□□□ -0.94
SNCA-202ENST00000345009 INS-IGF2F8WCM5 200 aa9.19□□□□□ -0.94
SNCA-202ENST00000345009 CCL24O00175 119 aa9.19□□□□□ -0.94
SNCA-202ENST00000345009 LY86O95711 162 aa9.19□□□□□ -0.94
SNCA-202ENST00000345009 PRH1P02810 166 aa9.19□□□□□ -0.94
SNCA-202ENST00000345009 LGALS1P09382 135 aaKnown RBP9.19□□□□□ -0.94
SNCA-202ENST00000345009 H2AFB1P0C5Y9 115 aa9.19□□□□□ -0.94
SNCA-202ENST00000345009 ATP5IP56385 69 aaPredicted RBP9.19□□□□□ -0.94
SNCA-202ENST00000345009 KIAA0141Q14154 515 aaPredicted RBP9.19□□□□□ -0.94
SNCA-202ENST00000345009 KLK9Q2XQG4 91 aa9.19□□□□□ -0.94
SNCA-202ENST00000345009 C15orf32Q32M92 178 aa9.19□□□□□ -0.94
SNCA-202ENST00000345009 PDLIM3Q53GG5 364 aaPredicted RBP9.19□□□□□ -0.94
SNCA-202ENST00000345009 GGNBP1Q5YKI7 109 aa9.19□□□□□ -0.94
SNCA-202ENST00000345009 C12orf45Q8N5I9 185 aaPredicted RBP9.19□□□□□ -0.94
SNCA-202ENST00000345009 OR1N2Q8NGR9 330 aa9.19□□□□□ -0.94
SNCA-202ENST00000345009 OR5B12Q96R08 314 aa9.19□□□□□ -0.94
SNCA-202ENST00000345009 CITED4Q96RK1 184 aa9.19□□□□□ -0.94
SNCA-202ENST00000345009 MARVELD1Q9BSK0 173 aa9.19□□□□□ -0.94
SNCA-202ENST00000345009 SSBP4Q9BWG4 385 aaPredicted RBP9.19□□□□□ -0.94
SNCA-202ENST00000345009 KLK9Q9UKQ9 250 aa9.19□□□□□ -0.94
SNCA-202ENST00000345009 IGLV11-55A0A075B6I3 123 aa9.18□□□□□ -0.94
SNCA-202ENST00000345009 TRBV7-1A0A0A6YYK4 115 aa9.18□□□□□ -0.94
SNCA-202ENST00000345009 SNRPGP15A8MWD9 76 aa9.18□□□□□ -0.94
SNCA-202ENST00000345009 I3L521 148 aa9.18□□□□□ -0.94
SNCA-202ENST00000345009 CORTO00230 105 aa9.18□□□□□ -0.94
SNCA-202ENST00000345009 OR2J3O76001 311 aa9.18□□□□□ -0.94
SNCA-202ENST00000345009 IGHV3-11P01762 117 aa9.18□□□□□ -0.94
SNCA-202ENST00000345009 HSPB1P04792 205 aaKnown RBP9.18□□□□□ -0.94
SNCA-202ENST00000345009 OR8U8P0C7N1 319 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms