RNA–Protein interactions for RNA: ENST00000344951.8

CUL3-202, Transcript of cullin 3, humanhuman

TSL 2 BASIC

Gene CUL3, Length 6,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-202ENST00000344951 NDUFA2O43678 99 aa12.71□□□□□ -0.37
CUL3-202ENST00000344951 C8orf46Q8TAG6 207 aa12.71□□□□□ -0.37
CUL3-202ENST00000344951 TMEM186Q96B77 213 aa12.71□□□□□ -0.37
CUL3-202ENST00000344951 VKORC1Q9BQB6 163 aa12.71□□□□□ -0.37
CUL3-202ENST00000344951 VCX2Q9H322 139 aa12.71□□□□□ -0.37
CUL3-202ENST00000344951 TMEM167AQ8TBQ9 72 aa12.71□□□□□ -0.38
CUL3-202ENST00000344951 ASPHD2Q6ICH7 369 aa12.71□□□□□ -0.38
CUL3-202ENST00000344951 TTC9CQ8N5M4 171 aa12.71□□□□□ -0.38
CUL3-202ENST00000344951 LINC00587B1AMM8 73 aa12.7□□□□□ -0.38
CUL3-202ENST00000344951 B9A039 149 aa12.7□□□□□ -0.38
CUL3-202ENST00000344951 SRSF4Q08170 494 aaKnown RBP12.7□□□□□ -0.38
CUL3-202ENST00000344951 ZNF703Q9H7S9 590 aaPredicted RBP12.7□□□□□ -0.38
CUL3-202ENST00000344951 STAG3L3P0CL85 134 aa12.7□□□□□ -0.38
CUL3-202ENST00000344951 SLC25A45Q8N413 288 aa12.7□□□□□ -0.38
CUL3-202ENST00000344951 FNDC4Q9H6D8 234 aaPredicted RBP12.7□□□□□ -0.38
CUL3-202ENST00000344951 CD28P10747 220 aa12.7□□□□□ -0.38
CUL3-202ENST00000344951 SRSF3P84103 164 aaKnown RBP12.7□□□□□ -0.38
CUL3-202ENST00000344951 DRAM1Q8N682 238 aa12.7□□□□□ -0.38
CUL3-202ENST00000344951 TRAV14DV4A0A0A6YYC5 116 aa12.7□□□□□ -0.38
CUL3-202ENST00000344951 EGR4Q05215 589 aa12.7□□□□□ -0.38
CUL3-202ENST00000344951 SMIM8Q96KF7 97 aa12.7□□□□□ -0.38
CUL3-202ENST00000344951 PTPRZ1P23471 2315 aaPredicted RBP12.69□□□□□ -0.38
CUL3-202ENST00000344951 GREM1O60565 184 aa12.69□□□□□ -0.38
CUL3-202ENST00000344951 ZNF146Q15072 292 aa12.69□□□□□ -0.38
CUL3-202ENST00000344951 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.69□□□□□ -0.38
CUL3-202ENST00000344951 SIGLEC12Q96PQ1 595 aa12.69□□□□□ -0.38
CUL3-202ENST00000344951 FAM90A10PA6NDY2 464 aa12.69□□□□□ -0.38
CUL3-202ENST00000344951 FAM90A18PA6NE21 464 aa12.69□□□□□ -0.38
CUL3-202ENST00000344951 FAM90A16PA6NEW6 464 aa12.69□□□□□ -0.38
CUL3-202ENST00000344951 FAM90A20PA6NIJ5 464 aa12.69□□□□□ -0.38
CUL3-202ENST00000344951 FAM90A8PA6NJQ4 464 aa12.69□□□□□ -0.38
CUL3-202ENST00000344951 FAM90A7PA6NKC0 464 aa12.69□□□□□ -0.38
CUL3-202ENST00000344951 FAM90A22PA8MWA6 464 aa12.69□□□□□ -0.38
CUL3-202ENST00000344951 FAM90A12PA8MX19 464 aa12.69□□□□□ -0.38
CUL3-202ENST00000344951 FAM90A5PA8MXJ8 464 aa12.69□□□□□ -0.38
CUL3-202ENST00000344951 FAM90A23PA8MXZ1 464 aa12.69□□□□□ -0.38
CUL3-202ENST00000344951 FAM90A15PP0C7V4 464 aa12.69□□□□□ -0.38
CUL3-202ENST00000344951 FAM90A13PP0C7W8 464 aa12.69□□□□□ -0.38
CUL3-202ENST00000344951 FAM90A14PP0C7W9 464 aa12.69□□□□□ -0.38
CUL3-202ENST00000344951 FAM90A24PP0C7X0 464 aa12.69□□□□□ -0.38
CUL3-202ENST00000344951 SSBP4Q9BWG4 385 aaPredicted RBP12.69□□□□□ -0.38
CUL3-202ENST00000344951 SPCS1Q9Y6A9 102 aa12.69□□□□□ -0.38
CUL3-202ENST00000344951 ARID1AO14497 2285 aa12.69□□□□□ -0.38
CUL3-202ENST00000344951 RPL32P62910 135 aaKnown RBP12.69□□□□□ -0.38
CUL3-202ENST00000344951 LSM4Q9Y4Z0 139 aaKnown RBP12.69□□□□□ -0.38
CUL3-202ENST00000344951 OR2K2Q8NGT1 345 aa12.69□□□□□ -0.38
CUL3-202ENST00000344951 ABHD17AQ96GS6 310 aa12.69□□□□□ -0.38
CUL3-202ENST00000344951 EFEMP2O95967 443 aa12.68□□□□□ -0.38
CUL3-202ENST00000344951 TRPM6Q9BX84 2022 aa12.68□□□□□ -0.38
CUL3-202ENST00000344951 DPRXA6NFQ7 191 aa12.68□□□□□ -0.38
CUL3-202ENST00000344951 NBEAP1P0C6P0 100 aa12.68□□□□□ -0.38
CUL3-202ENST00000344951 JPT1Q9UK76 154 aa12.68□□□□□ -0.38
CUL3-202ENST00000344951 FAM90A26D6RGX4 464 aa12.68□□□□□ -0.38
CUL3-202ENST00000344951 BTCP35070 178 aa12.68□□□□□ -0.38
CUL3-202ENST00000344951 SFXN3Q9BWM7 321 aa12.68□□□□□ -0.38
CUL3-202ENST00000344951 METRNQ9UJH8 293 aa12.68□□□□□ -0.38
CUL3-202ENST00000344951 RNF222A6NCQ9 220 aa12.68□□□□□ -0.38
CUL3-202ENST00000344951 DERL1Q9BUN8 251 aa12.68□□□□□ -0.38
CUL3-202ENST00000344951 C21orf62Q9NYP8 219 aa12.68□□□□□ -0.38
CUL3-202ENST00000344951 ZNF729A6NN14 1252 aaPredicted RBP12.68□□□□□ -0.38
CUL3-202ENST00000344951 IGHMP01871 453 aa12.68□□□□□ -0.38
CUL3-202ENST00000344951 COX6A1P12074 109 aa12.68□□□□□ -0.38
CUL3-202ENST00000344951 FER1L6-AS1Q8NA97 138 aa12.68□□□□□ -0.38
CUL3-202ENST00000344951 LAMTOR3Q9UHA4 124 aa12.68□□□□□ -0.38
CUL3-202ENST00000344951 RPRMQ9NS64 109 aa12.67□□□□□ -0.38
CUL3-202ENST00000344951 A0A0G2JLM5 398 aa12.67□□□□□ -0.38
CUL3-202ENST00000344951 TMEM155Q4W5P6 130 aa12.67□□□□□ -0.38
CUL3-202ENST00000344951 ANKRD31Q8N7Z5 1873 aa12.67□□□□□ -0.38
CUL3-202ENST00000344951 RAMP1O60894 148 aa12.67□□□□□ -0.38
CUL3-202ENST00000344951 SMIM10L1P0DMW3 83 aa12.67□□□□□ -0.38
CUL3-202ENST00000344951 SMIM10Q96HG1 83 aa12.67□□□□□ -0.38
CUL3-202ENST00000344951 ST20Q9HBF5 79 aa12.67□□□□□ -0.38
CUL3-202ENST00000344951 HOXA3O43365 443 aaPredicted RBP12.67□□□□□ -0.38
CUL3-202ENST00000344951 RTBDNQ9BSG5 229 aaPredicted RBP12.67□□□□□ -0.38
CUL3-202ENST00000344951 JPT2Q9H910 190 aa12.67□□□□□ -0.38
CUL3-202ENST00000344951 VENTXO95231 258 aa12.67□□□□□ -0.38
CUL3-202ENST00000344951 MIR17HGQ75NE6 70 aa12.67□□□□□ -0.38
CUL3-202ENST00000344951 OR13A1Q8NGR1 328 aa12.67□□□□□ -0.38
CUL3-202ENST00000344951 Q9H3A6 140 aa12.67□□□□□ -0.38
CUL3-202ENST00000344951 LURAP1LQ8IV03 231 aa12.66□□□□□ -0.38
CUL3-202ENST00000344951 RFPL3SP0C7P2 107 aa12.66□□□□□ -0.38
CUL3-202ENST00000344951 TMEM219Q86XT9 240 aa12.66□□□□□ -0.38
CUL3-202ENST00000344951 HS3ST3B1Q9Y662 390 aa12.66□□□□□ -0.38
CUL3-202ENST00000344951 TRAV8-4A0A0B4J246 113 aa12.66□□□□□ -0.38
CUL3-202ENST00000344951 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.66□□□□□ -0.38
CUL3-202ENST00000344951 SRP19P09132 144 aaKnown RBP12.66□□□□□ -0.38
CUL3-202ENST00000344951 RCC1LQ96I51 464 aaKnown RBP12.66□□□□□ -0.38
CUL3-202ENST00000344951 H3BUT2 72 aa12.66□□□□□ -0.38
CUL3-202ENST00000344951 TIAF1O95411 115 aa12.66□□□□□ -0.38
CUL3-202ENST00000344951 PPP1R32Q7Z5V6 425 aa12.66□□□□□ -0.38
CUL3-202ENST00000344951 CTHRC1Q96CG8 243 aa12.66□□□□□ -0.38
CUL3-202ENST00000344951 SLC25A2Q9BXI2 301 aa12.66□□□□□ -0.38
CUL3-202ENST00000344951 TRBV9A0A0B4J1U6 114 aa12.66□□□□□ -0.38
CUL3-202ENST00000344951 CELA3BP08861 270 aa12.66□□□□□ -0.38
CUL3-202ENST00000344951 UCP3P55916 312 aa12.66□□□□□ -0.38
CUL3-202ENST00000344951 NR2C2APQ86WQ0 139 aa12.66□□□□□ -0.38
CUL3-202ENST00000344951 PSMG3Q9BT73 122 aaPredicted RBP12.66□□□□□ -0.38
CUL3-202ENST00000344951 PILRBQ9UKJ0 227 aa12.66□□□□□ -0.38
CUL3-202ENST00000344951 CCL3L1P16619 93 aa12.66□□□□□ -0.38
CUL3-202ENST00000344951 IFI27P40305 119 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms