RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 IFITM2Q01629 132 aa15.1■□□□□ 0.01
SMAD4-201ENST00000342988 TNFRSF14Q92956 283 aa15.1■□□□□ 0.01
SMAD4-201ENST00000342988 ESDP10768 282 aa15.1■□□□□ 0.01
SMAD4-201ENST00000342988 DEFB124Q8NES8 71 aa15.1■□□□□ 0.01
SMAD4-201ENST00000342988 CCL13Q99616 98 aa15.1■□□□□ 0.01
SMAD4-201ENST00000342988 PRDM13Q9H4Q3 707 aa15.1■□□□□ 0.01
SMAD4-201ENST00000342988 TM4SF4P48230 202 aa15.1■□□□□ 0.01
SMAD4-201ENST00000342988 CCL8P80075 99 aa15.1■□□□□ 0.01
SMAD4-201ENST00000342988 LINC00518Q8N0U6 118 aa15.1■□□□□ 0.01
SMAD4-201ENST00000342988 GDF15Q99988 308 aa15.1■□□□□ 0.01
SMAD4-201ENST00000342988 NDUFC2O95298 119 aa15.1■□□□□ 0.01
SMAD4-201ENST00000342988 NKG7Q16617 165 aa15.1■□□□□ 0.01
SMAD4-201ENST00000342988 TMEM54Q969K7 222 aa15.1■□□□□ 0.01
SMAD4-201ENST00000342988 RASL10BQ96S79 203 aa15.1■□□□□ 0.01
SMAD4-201ENST00000342988 TRGV11A0A075B6L2 103 aa15.09■□□□□ 0.01
SMAD4-201ENST00000342988 MOSP00540 346 aa15.09■□□□□ 0.01
SMAD4-201ENST00000342988 SNRPCP09234 159 aaKnown RBP15.09■□□□□ 0.01
SMAD4-201ENST00000342988 ZNF479Q96JC4 524 aa15.09■□□□□ 0.01
SMAD4-201ENST00000342988 NABP2Q9BQ15 211 aa15.09■□□□□ 0.01
SMAD4-201ENST00000342988 IGHV5-51A0A0C4DH38 117 aa15.09■□□□□ 0.01
SMAD4-201ENST00000342988 TRBV5-4A0A0C4DH59 114 aa15.09■□□□□ 0.01
SMAD4-201ENST00000342988 TRACP01848 142 aa15.09■□□□□ 0.01
SMAD4-201ENST00000342988 SAXO1Q8IYX7 474 aa15.09■□□□□ 0.01
SMAD4-201ENST00000342988 NBEAP1P0C6P0 100 aa15.09■□□□□ 0.01
SMAD4-201ENST00000342988 ZNRF1Q8ND25 227 aa15.09■□□□□ 0.01
SMAD4-201ENST00000342988 KLF4O43474 513 aa15.09■□□□□ 0.01
SMAD4-201ENST00000342988 PATE4P0C8F1 98 aa15.09■□□□□ 0.01
SMAD4-201ENST00000342988 LAGE3Q14657 143 aa15.09■□□□□ 0.01
SMAD4-201ENST00000342988 GCHFRP30047 84 aa15.09■□□□□ 0.01
SMAD4-201ENST00000342988 DCAF12L2Q5VW00 463 aa15.09■□□□□ 0.01
SMAD4-201ENST00000342988 THSD4Q6ZMP0 1018 aa15.09■□□□□ 0.01
SMAD4-201ENST00000342988 OR9G1Q8NH87 305 aa15.09■□□□□ 0.01
SMAD4-201ENST00000342988 EGR2P11161 476 aaPredicted RBP15.09■□□□□ 0.01
SMAD4-201ENST00000342988 SNHG12Q9BXW3 62 aa15.09■□□□□ 0.01
SMAD4-201ENST00000342988 POU2AF1Q16633 256 aa15.09■□□□□ 0.01
SMAD4-201ENST00000342988 TCTEX1D4Q5JR98 221 aa15.09■□□□□ 0.01
SMAD4-201ENST00000342988 AHRRA9YTQ3 701 aa15.08■□□□□ 0.01
SMAD4-201ENST00000342988 SNAI2O43623 268 aa15.08■□□□□ 0
SMAD4-201ENST00000342988 LY6EQ16553 131 aa15.08■□□□□ 0
SMAD4-201ENST00000342988 WDYHV1Q96HA8 205 aa15.08■□□□□ 0
SMAD4-201ENST00000342988 A0A1W2PPE3 182 aa15.08■□□□□ 0
SMAD4-201ENST00000342988 NTN1O95631 604 aa15.08■□□□□ 0
SMAD4-201ENST00000342988 A0A087WX48 190 aa15.08■□□□□ 0
SMAD4-201ENST00000342988 OR2H2O95918 312 aa15.07■□□□□ 0
SMAD4-201ENST00000342988 LIFP15018 202 aa15.07■□□□□ 0
SMAD4-201ENST00000342988 TEX45Q8NA69 505 aa15.07■□□□□ 0
SMAD4-201ENST00000342988 ST6GALNAC3Q8NDV1 305 aa15.07■□□□□ 0
SMAD4-201ENST00000342988 KLK13Q9UKR3 277 aa15.07■□□□□ 0
SMAD4-201ENST00000342988 ABHD12Q8N2K0 398 aa15.07■□□□□ 0
SMAD4-201ENST00000342988 RNF115Q9Y4L5 304 aa15.07■□□□□ 0
SMAD4-201ENST00000342988 A0A087WWC5 75 aa15.07■□□□□ 0
SMAD4-201ENST00000342988 DUSP14O95147 198 aaKnown RBP15.07■□□□□ 0
SMAD4-201ENST00000342988 TMEM252Q8N6L7 170 aa15.07■□□□□ 0
SMAD4-201ENST00000342988 HOXB1P14653 301 aaPredicted RBP15.07■□□□□ 0
SMAD4-201ENST00000342988 DLK2Q6UY11 383 aa15.07■□□□□ 0
SMAD4-201ENST00000342988 GVINP1Q7Z2Y8 2422 aa15.07■□□□□ 0
SMAD4-201ENST00000342988 PTP4A3O75365 173 aa15.07■□□□□ 0
SMAD4-201ENST00000342988 CACNG8Q8WXS5 425 aa15.07■□□□□ 0
SMAD4-201ENST00000342988 H0YL77 283 aa15.06■□□□□ 0
SMAD4-201ENST00000342988 TM4SF5O14894 197 aa15.06■□□□□ 0
SMAD4-201ENST00000342988 WFDC5Q8TCV5 224 aa15.06■□□□□ 0
SMAD4-201ENST00000342988 SFTA2Q6UW10 78 aa15.06■□□□□ 0
SMAD4-201ENST00000342988 OR10W1Q8NGF6 305 aa15.06■□□□□ 0
SMAD4-201ENST00000342988 IMMP2LQ96T52 175 aa15.06■□□□□ 0
SMAD4-201ENST00000342988 MALRD1Q5VYJ5 2156 aa15.06■□□□□ 0
SMAD4-201ENST00000342988 PLEKHB2Q96CS7 222 aa15.06■□□□□ 0
SMAD4-201ENST00000342988 JPT1Q9UK76 154 aa15.06■□□□□ 0
SMAD4-201ENST00000342988 GAGE2AQ6NT46 116 aa15.06■□□□□ 0
SMAD4-201ENST00000342988 CHCHD5Q9BSY4 110 aa15.06■□□□□ 0
SMAD4-201ENST00000342988 SORL1Q92673 2214 aa15.06■□□□□ 0
SMAD4-201ENST00000342988 TET2Q6N021 2002 aaPredicted RBP15.06■□□□□ 0
SMAD4-201ENST00000342988 IGHV3-72A0A0B4J1Y9 119 aa15.06■□□□□ 0
SMAD4-201ENST00000342988 RND3P61587 244 aa15.06■□□□□ 0
SMAD4-201ENST00000342988 RHOGP84095 191 aa15.06■□□□□ 0
SMAD4-201ENST00000342988 IGLV3-27P01718 113 aa15.05■□□□□ 0
SMAD4-201ENST00000342988 ZNF250P15622 560 aa15.05■□□□□ 0
SMAD4-201ENST00000342988 UNC119Q13432 240 aa15.05■□□□□ 0
SMAD4-201ENST00000342988 DSCR8Q96T75 97 aa15.05■□□□□ 0
SMAD4-201ENST00000342988 SLC50A1Q9BRV3 221 aa15.05■□□□□ 0
SMAD4-201ENST00000342988 FOXA3P55318 350 aaPredicted RBP15.05■□□□□ -0
SMAD4-201ENST00000342988 C2orf68Q2NKX9 166 aa15.05■□□□□ -0
SMAD4-201ENST00000342988 PRR33A8MZF0 331 aa15.05■□□□□ -0
SMAD4-201ENST00000342988 ATG4DQ86TL0 474 aaPredicted RBP15.05■□□□□ -0
SMAD4-201ENST00000342988 GTF3AQ92664 365 aaKnown RBP15.05■□□□□ -0
SMAD4-201ENST00000342988 MAJINQ3KP22 176 aa15.04■□□□□ -0
SMAD4-201ENST00000342988 MIXL1Q9H2W2 232 aa15.04■□□□□ -0
SMAD4-201ENST00000342988 EREGO14944 169 aa15.04■□□□□ -0
SMAD4-201ENST00000342988 ST6GALNAC6Q969X2 333 aa15.04■□□□□ -0
SMAD4-201ENST00000342988 SCARF2Q96GP6 870 aaPredicted RBP15.04■□□□□ -0
SMAD4-201ENST00000342988 TRAV9-2A0A087WT02 112 aa15.04■□□□□ -0
SMAD4-201ENST00000342988 FABP5P3A8MUU1 101 aa15.04■□□□□ -0
SMAD4-201ENST00000342988 TMEM126AQ9H061 195 aa15.04■□□□□ -0
SMAD4-201ENST00000342988 UPK2O00526 184 aa15.04■□□□□ -0
SMAD4-201ENST00000342988 PLXNB3Q9ULL4 1909 aa15.04■□□□□ -0
SMAD4-201ENST00000342988 IGKV1D-42A0A075B6H8 117 aa15.04■□□□□ -0
SMAD4-201ENST00000342988 DENND4CQ5VZ89 1909 aa15.04■□□□□ -0
SMAD4-201ENST00000342988 SSBP3Q9BWW4 388 aaPredicted RBP15.04■□□□□ -0
SMAD4-201ENST00000342988 FAM27BQ5VT28 67 aa15.03■□□□□ -0
SMAD4-201ENST00000342988 UBL5Q9BZL1 73 aa15.03■□□□□ -0
SMAD4-201ENST00000342988 PEX11BO96011 259 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms