RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 OR4A5Q8NH83 315 aa15.29■□□□□ 0.04
SMPD1-201ENST00000342245 C5orf30Q96GV9 206 aa15.29■□□□□ 0.04
SMPD1-201ENST00000342245 DUSP13Q9UII6 198 aa15.29■□□□□ 0.04
SMPD1-201ENST00000342245 SSMEM1Q8WWF3 244 aa15.29■□□□□ 0.04
SMPD1-201ENST00000342245 HSD17B10Q99714 261 aaKnown RBP15.29■□□□□ 0.04
SMPD1-201ENST00000342245 C19orf24Q9BVV8 132 aa15.29■□□□□ 0.04
SMPD1-201ENST00000342245 HEYLQ9NQ87 328 aaPredicted RBP15.29■□□□□ 0.04
SMPD1-201ENST00000342245 RTTNQ86VV8 2226 aa15.29■□□□□ 0.04
SMPD1-201ENST00000342245 SIVA1O15304 175 aa15.28■□□□□ 0.04
SMPD1-201ENST00000342245 FABP2P12104 132 aa15.28■□□□□ 0.04
SMPD1-201ENST00000342245 TAS2R45P59539 299 aa15.28■□□□□ 0.04
SMPD1-201ENST00000342245 GNG3P63215 75 aa15.28■□□□□ 0.04
SMPD1-201ENST00000342245 GTF3C1Q12789 2109 aa15.28■□□□□ 0.04
SMPD1-201ENST00000342245 A0A1B0GXF2 115 aa15.28■□□□□ 0.04
SMPD1-201ENST00000342245 C10orf142B7Z368 130 aa15.28■□□□□ 0.04
SMPD1-201ENST00000342245 FNDC10F2Z333 226 aa15.28■□□□□ 0.04
SMPD1-201ENST00000342245 MPC1Q9Y5U8 109 aa15.28■□□□□ 0.04
SMPD1-201ENST00000342245 IGLV3-12A0A075B6K2 115 aa15.27■□□□□ 0.04
SMPD1-201ENST00000342245 CA6P23280 308 aa15.27■□□□□ 0.04
SMPD1-201ENST00000342245 CRYBA4P53673 196 aa15.27■□□□□ 0.04
SMPD1-201ENST00000342245 DSCR4P56555 118 aaPredicted RBP15.27■□□□□ 0.04
SMPD1-201ENST00000342245 LYSMD4Q5XG99 296 aa15.27■□□□□ 0.04
SMPD1-201ENST00000342245 AAED1Q7RTV5 226 aa15.27■□□□□ 0.04
SMPD1-201ENST00000342245 Q8IYB0 196 aa15.27■□□□□ 0.04
SMPD1-201ENST00000342245 OR9G4Q8NGQ1 327 aa15.27■□□□□ 0.04
SMPD1-201ENST00000342245 OR4A16Q8NH70 328 aa15.27■□□□□ 0.04
SMPD1-201ENST00000342245 FAM222BQ8WU58 562 aa15.27■□□□□ 0.04
SMPD1-201ENST00000342245 GALMQ96C23 342 aa15.27■□□□□ 0.04
SMPD1-201ENST00000342245 IDI2-AS1Q9NZ38 188 aa15.27■□□□□ 0.04
SMPD1-201ENST00000342245 COLQQ9Y215 455 aaPredicted RBP15.27■□□□□ 0.04
SMPD1-201ENST00000342245 ZNF257Q9Y2Q1 563 aa15.27■□□□□ 0.04
SMPD1-201ENST00000342245 GAGE12HA6NDE8 117 aa15.27■□□□□ 0.03
SMPD1-201ENST00000342245 IGHV4-34P06331 123 aa15.27■□□□□ 0.03
SMPD1-201ENST00000342245 BRWD1-AS2P59051 145 aa15.27■□□□□ 0.03
SMPD1-201ENST00000342245 PRR20EP86478 221 aa15.27■□□□□ 0.03
SMPD1-201ENST00000342245 PRR20CP86479 221 aa15.27■□□□□ 0.03
SMPD1-201ENST00000342245 PRR20DP86480 221 aa15.27■□□□□ 0.03
SMPD1-201ENST00000342245 PRR20BP86481 221 aa15.27■□□□□ 0.03
SMPD1-201ENST00000342245 PRR20AP86496 221 aa15.27■□□□□ 0.03
SMPD1-201ENST00000342245 KIR3DS1Q14943 382 aa15.27■□□□□ 0.03
SMPD1-201ENST00000342245 CEACAM16Q2WEN9 425 aa15.27■□□□□ 0.03
SMPD1-201ENST00000342245 TPRX1Q8N7U7 411 aa15.27■□□□□ 0.03
SMPD1-201ENST00000342245 POM121L2Q96KW2 1035 aa15.27■□□□□ 0.03
SMPD1-201ENST00000342245 SPATA25Q9BR10 227 aa15.27■□□□□ 0.03
SMPD1-201ENST00000342245 PHF7Q9BWX1 381 aaPredicted RBP15.27■□□□□ 0.03
SMPD1-201ENST00000342245 TRAV26-1A0A087WT03 109 aa15.26■□□□□ 0.03
SMPD1-201ENST00000342245 VDAC2P45880 294 aaPredicted RBP15.26■□□□□ 0.03
SMPD1-201ENST00000342245 FGFBP3Q8TAT2 258 aa15.26■□□□□ 0.03
SMPD1-201ENST00000342245 THYN1Q9P016 225 aa15.26■□□□□ 0.03
SMPD1-201ENST00000342245 ZNF207O43670 478 aaKnown RBP15.26■□□□□ 0.03
SMPD1-201ENST00000342245 DKK1O94907 266 aa15.26■□□□□ 0.03
SMPD1-201ENST00000342245 CA1P00915 261 aaPredicted RBP15.26■□□□□ 0.03
SMPD1-201ENST00000342245 RAC3P60763 192 aa15.26■□□□□ 0.03
SMPD1-201ENST00000342245 HBBP68871 147 aa15.26■□□□□ 0.03
SMPD1-201ENST00000342245 RPL24P83731 157 aaKnown RBP15.26■□□□□ 0.03
SMPD1-201ENST00000342245 ZNF808Q8N4W9 903 aaPredicted RBP15.26■□□□□ 0.03
SMPD1-201ENST00000342245 OR4X2Q8NGF9 303 aa15.26■□□□□ 0.03
SMPD1-201ENST00000342245 ZNF488Q96MN9 340 aa15.26■□□□□ 0.03
SMPD1-201ENST00000342245 CDX2Q99626 313 aaPredicted RBP15.26■□□□□ 0.03
SMPD1-201ENST00000342245 COL25A1Q9BXS0 654 aaPredicted RBP15.26■□□□□ 0.03
SMPD1-201ENST00000342245 GCM1Q9NP62 436 aa15.26■□□□□ 0.03
SMPD1-201ENST00000342245 ANKRD30BLA7E2S9 258 aa15.25■□□□□ 0.03
SMPD1-201ENST00000342245 GABRG2P18507 467 aa15.25■□□□□ 0.03
SMPD1-201ENST00000342245 FABP6P51161 128 aa15.25■□□□□ 0.03
SMPD1-201ENST00000342245 MIR17HGQ75NE6 70 aa15.25■□□□□ 0.03
SMPD1-201ENST00000342245 FAM214BQ7L5A3 538 aa15.25■□□□□ 0.03
SMPD1-201ENST00000342245 C17orf82Q86X59 251 aaPredicted RBP15.25■□□□□ 0.03
SMPD1-201ENST00000342245 FAM168AQ92567 244 aa15.25■□□□□ 0.03
SMPD1-201ENST00000342245 ZNF355PQ9NSJ1 428 aa15.25■□□□□ 0.03
SMPD1-201ENST00000342245 EYSQ5T1H1 3165 aa15.25■□□□□ 0.03
SMPD1-201ENST00000342245 TEX48A0A1B0GUV7 120 aa15.25■□□□□ 0.03
SMPD1-201ENST00000342245 UQCRFS1P47985 274 aa15.25■□□□□ 0.03
SMPD1-201ENST00000342245 FOXI2Q6ZQN5 318 aa15.25■□□□□ 0.03
SMPD1-201ENST00000342245 STXBP6Q8NFX7 210 aa15.25■□□□□ 0.03
SMPD1-201ENST00000342245 FER1L6-AS2Q96M78 137 aa15.25■□□□□ 0.03
SMPD1-201ENST00000342245 SSBP3Q9BWW4 388 aaPredicted RBP15.25■□□□□ 0.03
SMPD1-201ENST00000342245 CHCHD2Q9Y6H1 151 aaPredicted RBP15.25■□□□□ 0.03
SMPD1-201ENST00000342245 GGTLC3B5MD39 225 aa15.24■□□□□ 0.03
SMPD1-201ENST00000342245 J3QT63 122 aa15.24■□□□□ 0.03
SMPD1-201ENST00000342245 GFRA3O60609 400 aa15.24■□□□□ 0.03
SMPD1-201ENST00000342245 MYF5P13349 255 aa15.24■□□□□ 0.03
SMPD1-201ENST00000342245 LINC00173Q6ZV60 143 aa15.24■□□□□ 0.03
SMPD1-201ENST00000342245 SSX8Q7RTT4 187 aa15.24■□□□□ 0.03
SMPD1-201ENST00000342245 LRRC29Q8WV35 223 aa15.24■□□□□ 0.03
SMPD1-201ENST00000342245 SNRNP40Q96DI7 357 aaKnown RBP15.24■□□□□ 0.03
SMPD1-201ENST00000342245 MRAP2Q96G30 205 aa15.24■□□□□ 0.03
SMPD1-201ENST00000342245 LOXL2Q9Y4K0 774 aa15.24■□□□□ 0.03
SMPD1-201ENST00000342245 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.24■□□□□ 0.03
SMPD1-201ENST00000342245 TRGV8A0A0C4DH27 118 aa15.24■□□□□ 0.03
SMPD1-201ENST00000342245 A0A0J9YW62 118 aa15.24■□□□□ 0.03
SMPD1-201ENST00000342245 OR2H2O95918 312 aa15.24■□□□□ 0.03
SMPD1-201ENST00000342245 CAMPP49913 170 aa15.24■□□□□ 0.03
SMPD1-201ENST00000342245 SLC23A3Q6PIS1 610 aa15.24■□□□□ 0.03
SMPD1-201ENST00000342245 C1orf159Q96HA4 380 aa15.24■□□□□ 0.03
SMPD1-201ENST00000342245 NDFIP1Q9BT67 221 aa15.24■□□□□ 0.03
SMPD1-201ENST00000342245 SH2D7A6NKC9 451 aaPredicted RBP15.23■□□□□ 0.03
SMPD1-201ENST00000342245 HIGD1CA8MV81 97 aa15.23■□□□□ 0.03
SMPD1-201ENST00000342245 TIMM23BQ5SRD1 257 aa15.23■□□□□ 0.03
SMPD1-201ENST00000342245 PLXDC1Q8IUK5 500 aa15.23■□□□□ 0.03
SMPD1-201ENST00000342245 PERPQ96FX8 193 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms