RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 OR5H2Q8NGV7 314 aa9.71□□□□□ -0.86
NECTIN1-203ENST00000341398 OR6F1Q8NGZ6 308 aa9.71□□□□□ -0.86
NECTIN1-203ENST00000341398 OR5B3Q8NH48 314 aa9.71□□□□□ -0.86
NECTIN1-203ENST00000341398 SCARB1Q8WTV0 552 aa9.71□□□□□ -0.86
NECTIN1-203ENST00000341398 MOB3AQ96BX8 217 aa9.71□□□□□ -0.86
NECTIN1-203ENST00000341398 RNF167Q9H6Y7 350 aa9.71□□□□□ -0.86
NECTIN1-203ENST00000341398 ALMS1Q8TCU4 4167 aa9.7□□□□□ -0.86
NECTIN1-203ENST00000341398 C15orf62A8K5M9 175 aa9.7□□□□□ -0.86
NECTIN1-203ENST00000341398 GPR31O00270 319 aa9.7□□□□□ -0.86
NECTIN1-203ENST00000341398 NUPL2O15504 423 aaKnown RBP9.7□□□□□ -0.86
NECTIN1-203ENST00000341398 UBE2NLQ5JXB2 153 aa9.7□□□□□ -0.86
NECTIN1-203ENST00000341398 FCAMRQ8WWV6 532 aa9.7□□□□□ -0.86
NECTIN1-203ENST00000341398 RNF183Q96D59 192 aa9.7□□□□□ -0.86
NECTIN1-203ENST00000341398 CMTM3Q96MX0 182 aa9.7□□□□□ -0.86
NECTIN1-203ENST00000341398 PCLOQ9Y6V0 5065 aa9.7□□□□□ -0.86
NECTIN1-203ENST00000341398 IGHV3-21A0A0B4J1V1 117 aa9.69□□□□□ -0.86
NECTIN1-203ENST00000341398 PMP2P02689 132 aa9.69□□□□□ -0.86
NECTIN1-203ENST00000341398 CTSDP07339 412 aaPredicted RBP9.69□□□□□ -0.86
NECTIN1-203ENST00000341398 PRSS3P35030 304 aa9.69□□□□□ -0.86
NECTIN1-203ENST00000341398 G6PCP35575 357 aa9.69□□□□□ -0.86
NECTIN1-203ENST00000341398 MFAP4P55083 255 aa9.69□□□□□ -0.86
NECTIN1-203ENST00000341398 NEDD8Q15843 81 aa9.69□□□□□ -0.86
NECTIN1-203ENST00000341398 TMEM69Q5SWH9 247 aa9.69□□□□□ -0.86
NECTIN1-203ENST00000341398 TXN2Q99757 166 aa9.69□□□□□ -0.86
NECTIN1-203ENST00000341398 CHRDL1Q9BU40 450 aa9.69□□□□□ -0.86
NECTIN1-203ENST00000341398 FAM212BQ9NTI7 297 aaPredicted RBP9.69□□□□□ -0.86
NECTIN1-203ENST00000341398 NSG2Q9Y328 171 aa9.69□□□□□ -0.86
NECTIN1-203ENST00000341398 YIF1AO95070 293 aa9.68□□□□□ -0.86
NECTIN1-203ENST00000341398 ATP6V1G2O95670 118 aa9.68□□□□□ -0.86
NECTIN1-203ENST00000341398 CD5P06127 495 aa9.68□□□□□ -0.86
NECTIN1-203ENST00000341398 RPL35AP18077 110 aaKnown RBP9.68□□□□□ -0.86
NECTIN1-203ENST00000341398 TSPAN5P62079 268 aa9.68□□□□□ -0.86
NECTIN1-203ENST00000341398 PAFAH1B2P68402 229 aa9.68□□□□□ -0.86
NECTIN1-203ENST00000341398 OR1P1Q8NH06 330 aa9.68□□□□□ -0.86
NECTIN1-203ENST00000341398 OR4A16Q8NH70 328 aa9.68□□□□□ -0.86
NECTIN1-203ENST00000341398 SMPXQ9UHP9 88 aa9.68□□□□□ -0.86
NECTIN1-203ENST00000341398 SMIM31A0A1B0GVY4 71 aa9.67□□□□□ -0.86
NECTIN1-203ENST00000341398 K7EIM0 57 aa9.67□□□□□ -0.86
NECTIN1-203ENST00000341398 ZNF207O43670 478 aaKnown RBP9.67□□□□□ -0.86
NECTIN1-203ENST00000341398 EIF4EP06730 217 aaKnown RBP9.67□□□□□ -0.86
NECTIN1-203ENST00000341398 CTSGP08311 255 aa9.67□□□□□ -0.86
NECTIN1-203ENST00000341398 NAT1P18440 290 aa9.67□□□□□ -0.86
NECTIN1-203ENST00000341398 MFAP2P55001 183 aa9.67□□□□□ -0.86
NECTIN1-203ENST00000341398 ODF3L2Q3SX64 289 aa9.67□□□□□ -0.86
NECTIN1-203ENST00000341398 H2BFWTQ7Z2G1 175 aa9.67□□□□□ -0.86
NECTIN1-203ENST00000341398 SAMD12Q8N8I0 201 aa9.67□□□□□ -0.86
NECTIN1-203ENST00000341398 TMEM116Q8NCL8 245 aa9.67□□□□□ -0.86
NECTIN1-203ENST00000341398 MISP3Q96FF7 219 aa9.67□□□□□ -0.86
NECTIN1-203ENST00000341398 RHPN1-AS1Q9BWJ2 59 aa9.67□□□□□ -0.86
NECTIN1-203ENST00000341398 CSTL1Q9H114 145 aa9.67□□□□□ -0.86
NECTIN1-203ENST00000341398 MAP6D1Q9H9H5 199 aa9.67□□□□□ -0.86
NECTIN1-203ENST00000341398 TMEM14BQ9NUH8 114 aa9.67□□□□□ -0.86
NECTIN1-203ENST00000341398 IGHV3OR16-8A0A075B7F1 116 aa9.66□□□□□ -0.86
NECTIN1-203ENST00000341398 TRAV14DV4A0A0A6YYC5 116 aa9.66□□□□□ -0.86
NECTIN1-203ENST00000341398 IGHV7-4-1A0A0J9YVY3 117 aa9.66□□□□□ -0.86
NECTIN1-203ENST00000341398 C15orf61A6NNL5 157 aa9.66□□□□□ -0.86
NECTIN1-203ENST00000341398 MPTX1A8MV57 137 aa9.66□□□□□ -0.86
NECTIN1-203ENST00000341398 ADMP35318 185 aa9.66□□□□□ -0.86
NECTIN1-203ENST00000341398 TAS2R20P59543 309 aa9.66□□□□□ -0.86
NECTIN1-203ENST00000341398 ERHP84090 104 aaKnown RBP9.66□□□□□ -0.86
NECTIN1-203ENST00000341398 GATAD1Q8WUU5 269 aa9.66□□□□□ -0.86
NECTIN1-203ENST00000341398 SLC25A46Q96AG3 418 aa9.66□□□□□ -0.86
NECTIN1-203ENST00000341398 GINS3Q9BRX5 216 aa9.66□□□□□ -0.86
NECTIN1-203ENST00000341398 VCX3AQ9NNX9 186 aa9.66□□□□□ -0.86
NECTIN1-203ENST00000341398 ANAPC10Q9UM13 185 aa9.66□□□□□ -0.86
NECTIN1-203ENST00000341398 CHEK1O14757 476 aa9.65□□□□□ -0.86
NECTIN1-203ENST00000341398 GNG7O60262 68 aa9.65□□□□□ -0.86
NECTIN1-203ENST00000341398 FCGR2BP31994 310 aaPredicted RBP9.65□□□□□ -0.86
NECTIN1-203ENST00000341398 HRH1P35367 487 aa9.65□□□□□ -0.86
NECTIN1-203ENST00000341398 PHLDA2Q53GA4 152 aa9.65□□□□□ -0.86
NECTIN1-203ENST00000341398 RNF2Q99496 336 aa9.65□□□□□ -0.86
NECTIN1-203ENST00000341398 RARRES2Q99969 163 aa9.65□□□□□ -0.86
NECTIN1-203ENST00000341398 F8W735 103 aaPredicted RBP9.64□□□□□ -0.87
NECTIN1-203ENST00000341398 IFNA4P05014 189 aa9.64□□□□□ -0.87
NECTIN1-203ENST00000341398 HLA-DMAP28067 261 aa9.64□□□□□ -0.87
NECTIN1-203ENST00000341398 RPS19P39019 145 aaKnown RBP9.64□□□□□ -0.87
NECTIN1-203ENST00000341398 NPBWR1P48145 328 aa9.64□□□□□ -0.87
NECTIN1-203ENST00000341398 TFPI2P48307 235 aa9.64□□□□□ -0.87
NECTIN1-203ENST00000341398 HSPE1P61604 102 aaKnown RBP9.64□□□□□ -0.87
NECTIN1-203ENST00000341398 EWSR1Q01844 656 aaKnown RBP eCLIP9.64□□□□□ -0.87
NECTIN1-203ENST00000341398 KCTD21Q4G0X4 260 aa9.64□□□□□ -0.87
NECTIN1-203ENST00000341398 LYSMD2Q8IV50 215 aa9.64□□□□□ -0.87
NECTIN1-203ENST00000341398 APRG1Q8IVJ8 170 aa9.64□□□□□ -0.87
NECTIN1-203ENST00000341398 PHLDA1Q8WV24 401 aaPredicted RBP9.64□□□□□ -0.87
NECTIN1-203ENST00000341398 OR10C1Q96KK4 312 aa9.64□□□□□ -0.87
NECTIN1-203ENST00000341398 NXF2Q9GZY0 626 aaKnown RBP9.64□□□□□ -0.87
NECTIN1-203ENST00000341398 MFFQ9GZY8 342 aa9.64□□□□□ -0.87
NECTIN1-203ENST00000341398 FXYD6Q9H0Q3 95 aa9.64□□□□□ -0.87
NECTIN1-203ENST00000341398 IGKV3-7A0A075B6H7 116 aa9.63□□□□□ -0.87
NECTIN1-203ENST00000341398 I3L2K1 104 aa9.63□□□□□ -0.87
NECTIN1-203ENST00000341398 DNASE2O00115 360 aaPredicted RBP9.63□□□□□ -0.87
NECTIN1-203ENST00000341398 MT-CO2P00403 227 aa9.63□□□□□ -0.87
NECTIN1-203ENST00000341398 SNCAP37840 140 aa9.63□□□□□ -0.87
NECTIN1-203ENST00000341398 TBC1D26Q86UD7 250 aa9.63□□□□□ -0.87
NECTIN1-203ENST00000341398 ZNF114Q8NC26 417 aa9.63□□□□□ -0.87
NECTIN1-203ENST00000341398 DUSP18Q8NEJ0 188 aa9.63□□□□□ -0.87
NECTIN1-203ENST00000341398 PINX1Q96BK5 328 aaKnown RBP9.63□□□□□ -0.87
NECTIN1-203ENST00000341398 SEC22AQ96IW7 307 aa9.63□□□□□ -0.87
NECTIN1-203ENST00000341398 SCPEP1Q9HB40 452 aa9.63□□□□□ -0.87
NECTIN1-203ENST00000341398 ATG12O94817 140 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms