RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 OR5AU1Q8NGC0 362 aa11.85□□□□□ -0.51
CPSF7-201ENST00000340437 ZCCHC14Q8WYQ9 949 aaKnown RBP11.85□□□□□ -0.51
CPSF7-201ENST00000340437 PPIAL4AQ9Y536 164 aa11.85□□□□□ -0.51
CPSF7-201ENST00000340437 IGKV3-15P01624 115 aa11.84□□□□□ -0.51
CPSF7-201ENST00000340437 PDLIM4P50479 330 aa11.84□□□□□ -0.51
CPSF7-201ENST00000340437 FOXL1Q12952 345 aa11.84□□□□□ -0.51
CPSF7-201ENST00000340437 FAM216BQ8N7L0 139 aa11.84□□□□□ -0.51
CPSF7-201ENST00000340437 ST6GALNAC3Q8NDV1 305 aa11.84□□□□□ -0.51
CPSF7-201ENST00000340437 NABP2Q9BQ15 211 aa11.84□□□□□ -0.51
CPSF7-201ENST00000340437 CLCF1Q9UBD9 225 aa11.84□□□□□ -0.51
CPSF7-201ENST00000340437 ADGRG4Q8IZF6 3080 aa11.84□□□□□ -0.51
CPSF7-201ENST00000340437 MMP23AO75900 390 aa11.84□□□□□ -0.51
CPSF7-201ENST00000340437 IGKV1-16P04430 117 aa11.84□□□□□ -0.51
CPSF7-201ENST00000340437 AMTP48728 403 aa11.84□□□□□ -0.51
CPSF7-201ENST00000340437 BHLHA15Q7RTS1 189 aaPredicted RBP11.84□□□□□ -0.51
CPSF7-201ENST00000340437 RPRMLQ8N4K4 120 aa11.84□□□□□ -0.51
CPSF7-201ENST00000340437 OR9G1Q8NH87 305 aa11.84□□□□□ -0.51
CPSF7-201ENST00000340437 TMEM106BQ9NUM4 274 aa11.84□□□□□ -0.51
CPSF7-201ENST00000340437 TFPI2P48307 235 aa11.84□□□□□ -0.51
CPSF7-201ENST00000340437 TMEM144Q7Z5S9 345 aa11.84□□□□□ -0.51
CPSF7-201ENST00000340437 EAF1Q96JC9 268 aaPredicted RBP11.84□□□□□ -0.51
CPSF7-201ENST00000340437 VAMP8Q9BV40 100 aa11.84□□□□□ -0.51
CPSF7-201ENST00000340437 IL36BQ9NZH7 164 aa11.84□□□□□ -0.51
CPSF7-201ENST00000340437 TIMM8BQ9Y5J9 83 aaPredicted RBP11.84□□□□□ -0.51
CPSF7-201ENST00000340437 TMPRSS2O15393 492 aa11.83□□□□□ -0.51
CPSF7-201ENST00000340437 MPDU1O75352 247 aa11.83□□□□□ -0.51
CPSF7-201ENST00000340437 HSPE1P61604 102 aaKnown RBP11.83□□□□□ -0.51
CPSF7-201ENST00000340437 TIGITQ495A1 244 aa11.83□□□□□ -0.51
CPSF7-201ENST00000340437 JPT1Q9UK76 154 aa11.83□□□□□ -0.51
CPSF7-201ENST00000340437 ZNF253O75346 499 aa11.83□□□□□ -0.52
CPSF7-201ENST00000340437 TCTEX1D1Q8N7M0 179 aa11.83□□□□□ -0.52
CPSF7-201ENST00000340437 PRR7Q8TB68 274 aa11.83□□□□□ -0.52
CPSF7-201ENST00000340437 C1orf159Q96HA4 380 aa11.83□□□□□ -0.52
CPSF7-201ENST00000340437 IER2Q9BTL4 223 aa11.83□□□□□ -0.52
CPSF7-201ENST00000340437 NAV3Q8IVL0 2385 aa11.83□□□□□ -0.52
CPSF7-201ENST00000340437 TANC2Q9HCD6 1990 aa11.83□□□□□ -0.52
CPSF7-201ENST00000340437 IGHV3-21A0A0B4J1V1 117 aa11.82□□□□□ -0.52
CPSF7-201ENST00000340437 J3QW42 95 aa11.82□□□□□ -0.52
CPSF7-201ENST00000340437 LOXL3P58215 753 aa11.82□□□□□ -0.52
CPSF7-201ENST00000340437 CCL8P80075 99 aa11.82□□□□□ -0.52
CPSF7-201ENST00000340437 DNLZQ5SXM8 178 aa11.82□□□□□ -0.52
CPSF7-201ENST00000340437 TUBG2Q9NRH3 451 aa11.82□□□□□ -0.52
CPSF7-201ENST00000340437 TP53TG3Q9ULZ0 132 aa11.82□□□□□ -0.52
CPSF7-201ENST00000340437 PTPRQQ9UMZ3 2332 aa11.82□□□□□ -0.52
CPSF7-201ENST00000340437 TRGV10A0A0A0MS01 117 aa11.82□□□□□ -0.52
CPSF7-201ENST00000340437 C1orf194Q5T5A4 169 aa11.82□□□□□ -0.52
CPSF7-201ENST00000340437 OR2T6Q8NHC8 308 aa11.82□□□□□ -0.52
CPSF7-201ENST00000340437 WNT10AQ9GZT5 417 aa11.82□□□□□ -0.52
CPSF7-201ENST00000340437 C15orf61A6NNL5 157 aa11.82□□□□□ -0.52
CPSF7-201ENST00000340437 SRRM5B3KS81 715 aa11.82□□□□□ -0.52
CPSF7-201ENST00000340437 IRF2P14316 349 aa11.82□□□□□ -0.52
CPSF7-201ENST00000340437 SARAFQ96BY9 339 aa11.82□□□□□ -0.52
CPSF7-201ENST00000340437 GNB4Q9HAV0 340 aa11.82□□□□□ -0.52
CPSF7-201ENST00000340437 SLC35D1Q9NTN3 355 aa11.82□□□□□ -0.52
CPSF7-201ENST00000340437 COL12A1Q99715 3063 aa11.82□□□□□ -0.52
CPSF7-201ENST00000340437 H3BTX0 84 aa11.81□□□□□ -0.52
CPSF7-201ENST00000340437 YPEL1O60688 119 aa11.81□□□□□ -0.52
CPSF7-201ENST00000340437 KLF3P57682 345 aaPredicted RBP11.81□□□□□ -0.52
CPSF7-201ENST00000340437 WFDC8Q8IUA0 241 aa11.81□□□□□ -0.52
CPSF7-201ENST00000340437 YPEL2Q96QA6 119 aa11.81□□□□□ -0.52
CPSF7-201ENST00000340437 DOPEY2Q9Y3R5 2298 aa11.81□□□□□ -0.52
CPSF7-201ENST00000340437 SRIP30626 198 aa11.81□□□□□ -0.52
CPSF7-201ENST00000340437 RAB1CQ92928 201 aa11.81□□□□□ -0.52
CPSF7-201ENST00000340437 DIRC2Q96SL1 478 aa11.81□□□□□ -0.52
CPSF7-201ENST00000340437 IDI2-AS1Q9NZ38 188 aa11.81□□□□□ -0.52
CPSF7-201ENST00000340437 ACACBO00763 2458 aa11.81□□□□□ -0.52
CPSF7-201ENST00000340437 REG1AP05451 166 aa11.81□□□□□ -0.52
CPSF7-201ENST00000340437 CD99P14209 185 aa11.81□□□□□ -0.52
CPSF7-201ENST00000340437 WT1P19544 449 aaPredicted RBP11.81□□□□□ -0.52
CPSF7-201ENST00000340437 CHRNB4P30926 498 aa11.81□□□□□ -0.52
CPSF7-201ENST00000340437 H1FXQ92522 213 aaKnown RBP11.81□□□□□ -0.52
CPSF7-201ENST00000340437 DSCAMO60469 2012 aa11.8□□□□□ -0.52
CPSF7-201ENST00000340437 ANKHD1Q8IWZ3 2542 aaKnown RBP11.8□□□□□ -0.52
CPSF7-201ENST00000340437 SPENQ96T58 3664 aaKnown RBP11.8□□□□□ -0.52
CPSF7-201ENST00000340437 SRRM4A7MD48 611 aaKnown RBP11.8□□□□□ -0.52
CPSF7-201ENST00000340437 TOX4O94842 621 aa11.8□□□□□ -0.52
CPSF7-201ENST00000340437 CAMPP49913 170 aa11.8□□□□□ -0.52
CPSF7-201ENST00000340437 BEND2Q8NDZ0 799 aa11.8□□□□□ -0.52
CPSF7-201ENST00000340437 RNF114Q9Y508 228 aa11.8□□□□□ -0.52
CPSF7-201ENST00000340437 OR5G3P0C626 314 aa11.8□□□□□ -0.52
CPSF7-201ENST00000340437 PYYP10082 97 aa11.8□□□□□ -0.52
CPSF7-201ENST00000340437 TRAT1Q6PIZ9 186 aa11.8□□□□□ -0.52
CPSF7-201ENST00000340437 TBL2Q9Y4P3 447 aaKnown RBP11.8□□□□□ -0.52
CPSF7-201ENST00000340437 DIRC3C9JPN6 131 aa11.8□□□□□ -0.52
CPSF7-201ENST00000340437 FOSL1P15407 271 aa11.8□□□□□ -0.52
CPSF7-201ENST00000340437 TNFAIP6P98066 277 aaPredicted RBP11.8□□□□□ -0.52
CPSF7-201ENST00000340437 C10orf55Q5SWW7 151 aa11.8□□□□□ -0.52
CPSF7-201ENST00000340437 BLNKQ8WV28 456 aa11.8□□□□□ -0.52
CPSF7-201ENST00000340437 STARD4Q96DR4 205 aa11.8□□□□□ -0.52
CPSF7-201ENST00000340437 RCHY1Q96PM5 261 aa11.8□□□□□ -0.52
CPSF7-201ENST00000340437 TMEM265A0A087WTH1 108 aa11.79□□□□□ -0.52
CPSF7-201ENST00000340437 IL19Q9UHD0 177 aa11.79□□□□□ -0.52
CPSF7-201ENST00000340437 SLC45A2Q9UMX9 530 aa11.79□□□□□ -0.52
CPSF7-201ENST00000340437 IGKV1OR2-108A0A075B7D4 117 aa11.79□□□□□ -0.52
CPSF7-201ENST00000340437 GPR6P46095 362 aaPredicted RBP11.79□□□□□ -0.52
CPSF7-201ENST00000340437 UBE2L3P68036 154 aaKnown RBP11.79□□□□□ -0.52
CPSF7-201ENST00000340437 C17orf58Q2M2W7 97 aa11.79□□□□□ -0.52
CPSF7-201ENST00000340437 MORN5Q5VZ52 161 aa11.79□□□□□ -0.52
CPSF7-201ENST00000340437 FAM90A1Q86YD7 464 aa11.79□□□□□ -0.52
CPSF7-201ENST00000340437 FBXL7Q9UJT9 491 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms