RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 H3BUT2 72 aa7.36□□□□□ -1.23
RTN3-202ENST00000339997 CD3EP07766 207 aa7.36□□□□□ -1.23
RTN3-202ENST00000339997 LHX2P50458 406 aa7.36□□□□□ -1.23
RTN3-202ENST00000339997 ICAM4Q14773 271 aa7.36□□□□□ -1.23
RTN3-202ENST00000339997 MIR17HGQ75NE6 70 aa7.36□□□□□ -1.23
RTN3-202ENST00000339997 PAQR4Q8N4S7 273 aaPredicted RBP7.36□□□□□ -1.23
RTN3-202ENST00000339997 FOXC2Q99958 501 aa7.36□□□□□ -1.23
RTN3-202ENST00000339997 FOXD3Q9UJU5 478 aaPredicted RBP7.36□□□□□ -1.23
RTN3-202ENST00000339997 C12orf77C9JDV5 145 aa7.36□□□□□ -1.23
RTN3-202ENST00000339997 APOMO95445 188 aa7.36□□□□□ -1.23
RTN3-202ENST00000339997 FXYD7P58549 80 aa7.36□□□□□ -1.23
RTN3-202ENST00000339997 JOSD1Q15040 202 aaPredicted RBP7.36□□□□□ -1.23
RTN3-202ENST00000339997 TCF24Q7RTU0 167 aa7.36□□□□□ -1.23
RTN3-202ENST00000339997 TMEM70Q9BUB7 260 aa7.36□□□□□ -1.23
RTN3-202ENST00000339997 NRN1Q9NPD7 142 aa7.36□□□□□ -1.23
RTN3-202ENST00000339997 IL6RP08887 468 aaPredicted RBP7.36□□□□□ -1.23
RTN3-202ENST00000339997 CD24P25063 80 aa7.36□□□□□ -1.23
RTN3-202ENST00000339997 GNG5P63218 68 aa7.36□□□□□ -1.23
RTN3-202ENST00000339997 PMS2CLQ68D20 193 aa7.36□□□□□ -1.23
RTN3-202ENST00000339997 LINC00305Q7Z4B0 112 aa7.36□□□□□ -1.23
RTN3-202ENST00000339997 DMRTC2Q8IXT2 367 aaPredicted RBP7.36□□□□□ -1.23
RTN3-202ENST00000339997 MTURNQ8N3F0 131 aa7.36□□□□□ -1.23
RTN3-202ENST00000339997 ZNF714Q96N38 554 aa7.36□□□□□ -1.23
RTN3-202ENST00000339997 CDX2Q99626 313 aaPredicted RBP7.36□□□□□ -1.23
RTN3-202ENST00000339997 PSMG3Q9BT73 122 aaPredicted RBP7.36□□□□□ -1.23
RTN3-202ENST00000339997 MS4A5Q9H3V2 200 aa7.36□□□□□ -1.23
RTN3-202ENST00000339997 LAMTOR2Q9Y2Q5 125 aa7.36□□□□□ -1.23
RTN3-202ENST00000339997 FOXI3A8MTJ6 420 aaPredicted RBP7.35□□□□□ -1.23
RTN3-202ENST00000339997 HAX1O00165 279 aa7.35□□□□□ -1.23
RTN3-202ENST00000339997 RAMP3O60896 148 aa7.35□□□□□ -1.23
RTN3-202ENST00000339997 HGFACQ04756 655 aa7.35□□□□□ -1.23
RTN3-202ENST00000339997 TRA2AQ13595 282 aaKnown RBP eCLIP7.35□□□□□ -1.233e-6■□□□□ 8.6
RTN3-202ENST00000339997 CYP2G1PQ6ZSU1 146 aa7.35□□□□□ -1.23
RTN3-202ENST00000339997 NIT1Q86X76 327 aa7.35□□□□□ -1.23
RTN3-202ENST00000339997 SLX1AQ9BQ83 275 aa7.35□□□□□ -1.23
RTN3-202ENST00000339997 ALKBH7Q9BT30 221 aaPredicted RBP7.35□□□□□ -1.23
RTN3-202ENST00000339997 NDUFAF3Q9BU61 184 aa7.35□□□□□ -1.23
RTN3-202ENST00000339997 ZNF581Q9P0T4 197 aa7.35□□□□□ -1.23
RTN3-202ENST00000339997 PPIFP30405 207 aaKnown RBP7.35□□□□□ -1.23
RTN3-202ENST00000339997 LCN2P80188 198 aa7.35□□□□□ -1.23
RTN3-202ENST00000339997 FAM214BQ7L5A3 538 aa7.35□□□□□ -1.23
RTN3-202ENST00000339997 TMEM256Q8N2U0 113 aa7.35□□□□□ -1.23
RTN3-202ENST00000339997 FAM169BQ8N8A8 192 aa7.35□□□□□ -1.23
RTN3-202ENST00000339997 FNDC1Q4ZHG4 1894 aaPredicted RBP7.35□□□□□ -1.23
RTN3-202ENST00000339997 A0A0G2JMM0 328 aa7.35□□□□□ -1.23
RTN3-202ENST00000339997 A0A1B0GWB2 263 aa7.35□□□□□ -1.23
RTN3-202ENST00000339997 A0A1W2PPB8 328 aa7.35□□□□□ -1.23
RTN3-202ENST00000339997 A0A1W2PRS3 328 aa7.35□□□□□ -1.23
RTN3-202ENST00000339997 C5orf63A6NC05 138 aa7.35□□□□□ -1.23
RTN3-202ENST00000339997 KIR3DP1A8MWS1 328 aa7.35□□□□□ -1.23
RTN3-202ENST00000339997 APOHP02749 345 aaPredicted RBP7.35□□□□□ -1.23
RTN3-202ENST00000339997 IL4P05112 153 aa7.35□□□□□ -1.23
RTN3-202ENST00000339997 ADMP35318 185 aa7.35□□□□□ -1.23
RTN3-202ENST00000339997 STPG1Q5TH74 334 aa7.35□□□□□ -1.23
RTN3-202ENST00000339997 LCN12Q6JVE5 192 aa7.35□□□□□ -1.23
RTN3-202ENST00000339997 TMEM136Q6ZRR5 245 aa7.35□□□□□ -1.23
RTN3-202ENST00000339997 WDYHV1Q96HA8 205 aa7.35□□□□□ -1.23
RTN3-202ENST00000339997 TMEM250H0YL14 139 aa7.35□□□□□ -1.23
RTN3-202ENST00000339997 M0R381 172 aa7.35□□□□□ -1.23
RTN3-202ENST00000339997 EBLN2Q6P2I7 272 aa7.35□□□□□ -1.23
RTN3-202ENST00000339997 INO80CQ6PI98 192 aaPredicted RBP7.35□□□□□ -1.23
RTN3-202ENST00000339997 OR10AG1Q8NH19 301 aa7.35□□□□□ -1.23
RTN3-202ENST00000339997 C16orf92Q96LL3 132 aa7.35□□□□□ -1.23
RTN3-202ENST00000339997 PSMB11A5LHX3 300 aa7.34□□□□□ -1.23
RTN3-202ENST00000339997 LINC00614P0C842 121 aa7.34□□□□□ -1.23
RTN3-202ENST00000339997 GAS1P54826 345 aa7.34□□□□□ -1.23
RTN3-202ENST00000339997 LINC00205P59089 165 aa7.34□□□□□ -1.23
RTN3-202ENST00000339997 TMEM78Q5T7P6 136 aa7.34□□□□□ -1.23
RTN3-202ENST00000339997 UNQ5815/PRO19632Q6UWF5 114 aa7.34□□□□□ -1.23
RTN3-202ENST00000339997 C10orf126Q8N4M7 172 aa7.34□□□□□ -1.23
RTN3-202ENST00000339997 OR13A1Q8NGR1 328 aa7.34□□□□□ -1.23
RTN3-202ENST00000339997 DERL1Q9BUN8 251 aa7.34□□□□□ -1.23
RTN3-202ENST00000339997 SCNM1Q9BWG6 230 aa7.34□□□□□ -1.23
RTN3-202ENST00000339997 ZNF430Q9H8G1 570 aaPredicted RBP7.34□□□□□ -1.23
RTN3-202ENST00000339997 TRBV20OR9-2A0A075B6H5 130 aa7.34□□□□□ -1.23
RTN3-202ENST00000339997 A0A0A6YYD4 124 aa7.34□□□□□ -1.23
RTN3-202ENST00000339997 TRAV24A0A0B4J272 114 aa7.34□□□□□ -1.23
RTN3-202ENST00000339997 EPOPA6NHQ4 379 aa7.34□□□□□ -1.23
RTN3-202ENST00000339997 C9JCJ5 164 aa7.34□□□□□ -1.23
RTN3-202ENST00000339997 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.34□□□□□ -1.23
RTN3-202ENST00000339997 IGHV1-45A0A0A0MS14 117 aa7.34□□□□□ -1.23
RTN3-202ENST00000339997 A0A1B0GUS0 222 aa7.34□□□□□ -1.23
RTN3-202ENST00000339997 C16orf97H3BN30 126 aa7.34□□□□□ -1.23
RTN3-202ENST00000339997 CELA3BP08861 270 aa7.34□□□□□ -1.23
RTN3-202ENST00000339997 GALNT14Q96FL9 552 aa7.34□□□□□ -1.23
RTN3-202ENST00000339997 NPFFR1Q9GZQ6 430 aa7.34□□□□□ -1.23
RTN3-202ENST00000339997 HIGD1CA8MV81 97 aa7.34□□□□□ -1.24
RTN3-202ENST00000339997 AMBPP02760 352 aa7.34□□□□□ -1.24
RTN3-202ENST00000339997 PF4V1P10720 104 aa7.34□□□□□ -1.24
RTN3-202ENST00000339997 PCSK4Q6UW60 755 aa7.34□□□□□ -1.24
RTN3-202ENST00000339997 FAM216BQ8N7L0 139 aa7.34□□□□□ -1.24
RTN3-202ENST00000339997 REG4Q9BYZ8 158 aa7.34□□□□□ -1.24
RTN3-202ENST00000339997 PRDM13Q9H4Q3 707 aa7.34□□□□□ -1.24
RTN3-202ENST00000339997 WBP1LQ9NX94 342 aa7.34□□□□□ -1.24
RTN3-202ENST00000339997 RAXQ9Y2V3 346 aa7.34□□□□□ -1.24
RTN3-202ENST00000339997 A1L4Q6 167 aa7.33□□□□□ -1.24
RTN3-202ENST00000339997 PYYP10082 97 aa7.33□□□□□ -1.24
RTN3-202ENST00000339997 RELQ04864 619 aaPredicted RBP7.33□□□□□ -1.24
RTN3-202ENST00000339997 TMEM170BQ5T4T1 132 aa7.33□□□□□ -1.24
RTN3-202ENST00000339997 UBALD2Q8IYN6 164 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms