RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 SLC25A48Q6ZT89 311 aaKnown RBP13.3□□□□□ -0.28
LITAF-201ENST00000339430 ACTL6BO94805 426 aa13.29□□□□□ -0.28
LITAF-201ENST00000339430 TEX36Q5VZQ5 186 aa13.29□□□□□ -0.28
LITAF-201ENST00000339430 ZNF843Q8N446 348 aa13.29□□□□□ -0.28
LITAF-201ENST00000339430 OR2T10Q8NGZ9 312 aa13.29□□□□□ -0.28
LITAF-201ENST00000339430 PLEKHA3Q9HB20 300 aa13.29□□□□□ -0.28
LITAF-201ENST00000339430 SLC25A10Q9UBX3 287 aaPredicted RBP13.29□□□□□ -0.28
LITAF-201ENST00000339430 YTHDF2Q9Y5A9 579 aaKnown RBP13.29□□□□□ -0.28
LITAF-201ENST00000339430 ZNF462Q96JM2 2506 aa13.29□□□□□ -0.28
LITAF-201ENST00000339430 hADV38S2A0JD32 116 aa13.29□□□□□ -0.28
LITAF-201ENST00000339430 REG1BP48304 166 aa13.29□□□□□ -0.28
LITAF-201ENST00000339430 FAM78BQ5VT40 261 aa13.29□□□□□ -0.28
LITAF-201ENST00000339430 DMRTC2Q8IXT2 367 aaPredicted RBP13.29□□□□□ -0.28
LITAF-201ENST00000339430 NEUROG1Q92886 237 aa13.29□□□□□ -0.28
LITAF-201ENST00000339430 TRBV20OR9-2A0A075B6H5 130 aa13.28□□□□□ -0.28
LITAF-201ENST00000339430 C17orf100A8MU93 164 aa13.28□□□□□ -0.28
LITAF-201ENST00000339430 SHISA9B4DS77 424 aa13.28□□□□□ -0.28
LITAF-201ENST00000339430 CD3EP07766 207 aa13.28□□□□□ -0.28
LITAF-201ENST00000339430 PRSS8Q16651 343 aa13.28□□□□□ -0.28
LITAF-201ENST00000339430 RTL8BQ17RB0 113 aa13.28□□□□□ -0.28
LITAF-201ENST00000339430 TMEM249Q2WGJ8 235 aa13.28□□□□□ -0.28
LITAF-201ENST00000339430 CORO2AQ92828 525 aa13.28□□□□□ -0.28
LITAF-201ENST00000339430 NKX6-3A6NJ46 265 aa13.28□□□□□ -0.28
LITAF-201ENST00000339430 F6UZH7 168 aa13.28□□□□□ -0.28
LITAF-201ENST00000339430 UPK2O00526 184 aa13.28□□□□□ -0.28
LITAF-201ENST00000339430 SIAH2O43255 324 aa13.28□□□□□ -0.28
LITAF-201ENST00000339430 FCN3O75636 299 aa13.28□□□□□ -0.28
LITAF-201ENST00000339430 TNFRSF1AP19438 455 aa13.28□□□□□ -0.28
LITAF-201ENST00000339430 RPL31P62899 125 aaKnown RBP13.28□□□□□ -0.28
LITAF-201ENST00000339430 MLANAQ16655 118 aa13.28□□□□□ -0.28
LITAF-201ENST00000339430 TMEM37Q8WXS4 190 aa13.28□□□□□ -0.28
LITAF-201ENST00000339430 PITPNC1Q9UKF7 332 aa13.28□□□□□ -0.28
LITAF-201ENST00000339430 PRNDQ9UKY0 176 aa13.28□□□□□ -0.28
LITAF-201ENST00000339430 FUT9Q9Y231 359 aa13.28□□□□□ -0.28
LITAF-201ENST00000339430 FLNCQ14315 2725 aa13.28□□□□□ -0.28
LITAF-201ENST00000339430 NDUFS6O75380 124 aaKnown RBP13.27□□□□□ -0.29
LITAF-201ENST00000339430 SAA1P0DJI8 122 aaPredicted RBP13.27□□□□□ -0.29
LITAF-201ENST00000339430 GATA2P23769 480 aaPredicted RBP13.27□□□□□ -0.29
LITAF-201ENST00000339430 GCHFRP30047 84 aa13.27□□□□□ -0.29
LITAF-201ENST00000339430 POU2AF1Q16633 256 aa13.27□□□□□ -0.29
LITAF-201ENST00000339430 OR10W1Q8NGF6 305 aa13.27□□□□□ -0.29
LITAF-201ENST00000339430 OR4P4Q8NGL7 312 aa13.27□□□□□ -0.29
LITAF-201ENST00000339430 H1FXQ92522 213 aaKnown RBP13.27□□□□□ -0.29
LITAF-201ENST00000339430 CCL17Q92583 94 aa13.27□□□□□ -0.29
LITAF-201ENST00000339430 HIST1H2BLQ99880 126 aa13.27□□□□□ -0.29
LITAF-201ENST00000339430 MRPL20Q9BYC9 149 aaKnown RBP13.27□□□□□ -0.29
LITAF-201ENST00000339430 LINC00574Q9H8X3 128 aa13.27□□□□□ -0.29
LITAF-201ENST00000339430 LINC00312Q9Y6C7 94 aa13.27□□□□□ -0.29
LITAF-201ENST00000339430 TEX50A0A1B0GTY4 177 aa13.27□□□□□ -0.29
LITAF-201ENST00000339430 PLAUP00749 431 aa13.27□□□□□ -0.29
LITAF-201ENST00000339430 RHOBP62745 196 aa13.27□□□□□ -0.29
LITAF-201ENST00000339430 PRCDQ00LT1 54 aa13.27□□□□□ -0.29
LITAF-201ENST00000339430 RAB31Q13636 194 aa13.27□□□□□ -0.29
LITAF-201ENST00000339430 MIR17HGQ75NE6 70 aa13.27□□□□□ -0.29
LITAF-201ENST00000339430 PACRGQ96M98 296 aaPredicted RBP13.27□□□□□ -0.29
LITAF-201ENST00000339430 SAP30LQ9HAJ7 183 aa13.27□□□□□ -0.29
LITAF-201ENST00000339430 A0A0U1RQK1 487 aa13.26□□□□□ -0.29
LITAF-201ENST00000339430 XKRY2A2RUG3 117 aa13.26□□□□□ -0.29
LITAF-201ENST00000339430 E7EQL1 145 aa13.26□□□□□ -0.29
LITAF-201ENST00000339430 GGCTO75223 188 aaKnown RBP13.26□□□□□ -0.29
LITAF-201ENST00000339430 SRP14P37108 136 aaKnown RBP13.26□□□□□ -0.29
LITAF-201ENST00000339430 KCNIP4Q6PIL6 250 aa13.26□□□□□ -0.29
LITAF-201ENST00000339430 MYO18BQ8IUG5 2567 aa13.26□□□□□ -0.29
LITAF-201ENST00000339430 RPL29P47914 159 aaKnown RBP13.25□□□□□ -0.29
LITAF-201ENST00000339430 LYPD2Q6UXB3 125 aa13.25□□□□□ -0.29
LITAF-201ENST00000339430 GAL3ST2Q9H3Q3 398 aa13.25□□□□□ -0.29
LITAF-201ENST00000339430 IGKV1OR2-108A0A075B7D4 117 aa13.25□□□□□ -0.29
LITAF-201ENST00000339430 IL3RAP26951 378 aa13.25□□□□□ -0.29
LITAF-201ENST00000339430 C9orf152Q5JTZ5 239 aa13.25□□□□□ -0.29
LITAF-201ENST00000339430 TMEM200BQ69YZ2 307 aa13.25□□□□□ -0.29
LITAF-201ENST00000339430 TMEM183AQ8IXX5 376 aa13.25□□□□□ -0.29
LITAF-201ENST00000339430 OR1P1Q8NH06 330 aa13.25□□□□□ -0.29
LITAF-201ENST00000339430 HARBI1Q96MB7 349 aa13.25□□□□□ -0.29
LITAF-201ENST00000339430 ZNF714Q96N38 554 aa13.25□□□□□ -0.29
LITAF-201ENST00000339430 DMRT1Q9Y5R6 373 aa13.25□□□□□ -0.29
LITAF-201ENST00000339430 ZNF320A2RRD8 509 aa13.24□□□□□ -0.29
LITAF-201ENST00000339430 LINC00869P0C866 280 aa13.24□□□□□ -0.29
LITAF-201ENST00000339430 PRR20EP86478 221 aa13.24□□□□□ -0.29
LITAF-201ENST00000339430 PRR20CP86479 221 aa13.24□□□□□ -0.29
LITAF-201ENST00000339430 PRR20DP86480 221 aa13.24□□□□□ -0.29
LITAF-201ENST00000339430 PRR20BP86481 221 aa13.24□□□□□ -0.29
LITAF-201ENST00000339430 PRR20AP86496 221 aa13.24□□□□□ -0.29
LITAF-201ENST00000339430 DIAPH2-AS1Q14236 149 aa13.24□□□□□ -0.29
LITAF-201ENST00000339430 ZNF833PQ6ZTB9 187 aa13.24□□□□□ -0.29
LITAF-201ENST00000339430 OCC1Q8TAD7 63 aa13.24□□□□□ -0.29
LITAF-201ENST00000339430 SFRP2Q96HF1 295 aa13.24□□□□□ -0.29
LITAF-201ENST00000339430 PFDN5Q99471 154 aa13.24□□□□□ -0.29
LITAF-201ENST00000339430 PPIAL4EA0A075B759 164 aa13.24□□□□□ -0.29
LITAF-201ENST00000339430 MDFIC2A0A1B0GVS7 189 aa13.24□□□□□ -0.29
LITAF-201ENST00000339430 VSTM5A8MXK1 200 aa13.24□□□□□ -0.29
LITAF-201ENST00000339430 PPIAL4DF5H284 164 aa13.24□□□□□ -0.29
LITAF-201ENST00000339430 PPIAL4FP0DN26 164 aa13.24□□□□□ -0.29
LITAF-201ENST00000339430 ACTL10Q5JWF8 245 aa13.24□□□□□ -0.29
LITAF-201ENST00000339430 ZNF257Q9Y2Q1 563 aa13.24□□□□□ -0.29
LITAF-201ENST00000339430 PPIAL4AQ9Y536 164 aa13.24□□□□□ -0.29
LITAF-201ENST00000339430 NABP2Q9BQ15 211 aa13.23□□□□□ -0.29
LITAF-201ENST00000339430 ABCA4P78363 2273 aa13.23□□□□□ -0.29
LITAF-201ENST00000339430 TMEM178BH3BS89 294 aa13.23□□□□□ -0.29
LITAF-201ENST00000339430 C19orf84I3L1E1 186 aa13.23□□□□□ -0.29
LITAF-201ENST00000339430 OR10J1P30954 320 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms