RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 FAM222BQ8WU58 562 aa5.22□□□□□ -1.57
PRKDC-202ENST00000338368 ATP5G3P48201 142 aa5.22□□□□□ -1.57
PRKDC-202ENST00000338368 PRSS33Q8NF86 280 aa5.22□□□□□ -1.57
PRKDC-202ENST00000338368 PIMREGQ9BSJ6 248 aa5.22□□□□□ -1.57
PRKDC-202ENST00000338368 MSRB2Q9Y3D2 182 aa5.22□□□□□ -1.57
PRKDC-202ENST00000338368 IGFL2Q6UWQ7 119 aa5.22□□□□□ -1.57
PRKDC-202ENST00000338368 CYYR1Q96J86 154 aa5.22□□□□□ -1.57
PRKDC-202ENST00000338368 FBXL15Q9H469 300 aa5.22□□□□□ -1.57
PRKDC-202ENST00000338368 NPIPB11E5RHQ5 1161 aa5.22□□□□□ -1.57
PRKDC-202ENST00000338368 DLL1O00548 723 aa5.22□□□□□ -1.57
PRKDC-202ENST00000338368 KRTDAPP60985 99 aa5.22□□□□□ -1.57
PRKDC-202ENST00000338368 TMEM144Q7Z5S9 345 aa5.22□□□□□ -1.57
PRKDC-202ENST00000338368 ZNF430Q9H8G1 570 aaPredicted RBP5.22□□□□□ -1.57
PRKDC-202ENST00000338368 TET2Q6N021 2002 aaPredicted RBP5.22□□□□□ -1.57
PRKDC-202ENST00000338368 RRHO14718 337 aa5.22□□□□□ -1.57
PRKDC-202ENST00000338368 PMCHP20382 165 aa5.22□□□□□ -1.57
PRKDC-202ENST00000338368 FOXI3A8MTJ6 420 aaPredicted RBP5.22□□□□□ -1.57
PRKDC-202ENST00000338368 COL8A1P27658 744 aa5.22□□□□□ -1.57
PRKDC-202ENST00000338368 WDR25Q64LD2 544 aaPredicted RBP5.22□□□□□ -1.57
PRKDC-202ENST00000338368 TGIF2-C20orf24A0A0A6YYL0 155 aa5.21□□□□□ -1.57
PRKDC-202ENST00000338368 LINC00473A8K010 186 aa5.21□□□□□ -1.57
PRKDC-202ENST00000338368 TPPP2P59282 170 aa5.21□□□□□ -1.57
PRKDC-202ENST00000338368 CYP2G1PQ6ZSU1 146 aa5.21□□□□□ -1.57
PRKDC-202ENST00000338368 SNURFLB1AK76 121 aa5.21□□□□□ -1.57
PRKDC-202ENST00000338368 H0Y8G0 127 aa5.21□□□□□ -1.57
PRKDC-202ENST00000338368 GHRHP01286 108 aa5.21□□□□□ -1.57
PRKDC-202ENST00000338368 ARL14EPLP0DKL9 152 aa5.21□□□□□ -1.57
PRKDC-202ENST00000338368 IL15RAQ13261 267 aa5.21□□□□□ -1.57
PRKDC-202ENST00000338368 OR5I1Q13606 314 aa5.21□□□□□ -1.57
PRKDC-202ENST00000338368 CLDND2Q8NHS1 167 aa5.21□□□□□ -1.57
PRKDC-202ENST00000338368 TMEM133Q9H2Q1 129 aa5.21□□□□□ -1.57
PRKDC-202ENST00000338368 HIGD1AQ9Y241 93 aa5.21□□□□□ -1.57
PRKDC-202ENST00000338368 HIST1H1BP16401 226 aaKnown RBP5.21□□□□□ -1.57
PRKDC-202ENST00000338368 GAMTQ14353 236 aa5.21□□□□□ -1.57
PRKDC-202ENST00000338368 OR51G1Q8NGK1 321 aa5.21□□□□□ -1.57
PRKDC-202ENST00000338368 WFIKKN1Q96NZ8 548 aa5.21□□□□□ -1.57
PRKDC-202ENST00000338368 MS4A10Q96PG2 267 aa5.21□□□□□ -1.57
PRKDC-202ENST00000338368 HEPN1Q6WQI6 88 aa5.21□□□□□ -1.58
PRKDC-202ENST00000338368 MBD3L1Q8WWY6 194 aa5.21□□□□□ -1.58
PRKDC-202ENST00000338368 ZNF98A6NK75 572 aa5.21□□□□□ -1.58
PRKDC-202ENST00000338368 ATXN7O15265 892 aaPredicted RBP5.21□□□□□ -1.58
PRKDC-202ENST00000338368 FAM106CPP0CH98 169 aa5.21□□□□□ -1.58
PRKDC-202ENST00000338368 PMS2P11Q13670 270 aa5.21□□□□□ -1.58
PRKDC-202ENST00000338368 LY6DQ14210 128 aa5.21□□□□□ -1.58
PRKDC-202ENST00000338368 ADIPOQQ15848 244 aa5.21□□□□□ -1.58
PRKDC-202ENST00000338368 STPG3Q8N7X2 389 aa5.21□□□□□ -1.58
PRKDC-202ENST00000338368 CGAP01215 116 aa5.21□□□□□ -1.58
PRKDC-202ENST00000338368 P01737 135 aa5.21□□□□□ -1.58
PRKDC-202ENST00000338368 NBL1P41271 181 aa5.21□□□□□ -1.58
PRKDC-202ENST00000338368 MRPL54Q6P161 138 aaKnown RBP5.21□□□□□ -1.58
PRKDC-202ENST00000338368 WDR73Q6P4I2 378 aa5.21□□□□□ -1.58
PRKDC-202ENST00000338368 SONP18583 2426 aaKnown RBP5.21□□□□□ -1.58
PRKDC-202ENST00000338368 TMEM50AO95807 157 aa5.21□□□□□ -1.58
PRKDC-202ENST00000338368 TRGC1P0CF51 173 aa5.21□□□□□ -1.58
PRKDC-202ENST00000338368 KHDC1LQ5JSQ8 128 aa5.21□□□□□ -1.58
PRKDC-202ENST00000338368 SSX7Q7RTT5 188 aa5.21□□□□□ -1.58
PRKDC-202ENST00000338368 SSBP3Q9BWW4 388 aaPredicted RBP5.21□□□□□ -1.58
PRKDC-202ENST00000338368 TMEM14EPQ6UXP3 125 aa5.21□□□□□ -1.58
PRKDC-202ENST00000338368 DKK4Q9UBT3 224 aa5.21□□□□□ -1.58
PRKDC-202ENST00000338368 FAM90A9PA6NNJ1 464 aa5.2□□□□□ -1.58
PRKDC-202ENST00000338368 FAM215AQ9Y5M1 114 aa5.2□□□□□ -1.58
PRKDC-202ENST00000338368 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.2□□□□□ -1.58
PRKDC-202ENST00000338368 CMC4P56277 68 aaPredicted RBP5.2□□□□□ -1.58
PRKDC-202ENST00000338368 RPP25LQ8N5L8 163 aaKnown RBP5.2□□□□□ -1.58
PRKDC-202ENST00000338368 AGAP20933 346 aa5.2□□□□□ -1.58
PRKDC-202ENST00000338368 GCHFRP30047 84 aa5.2□□□□□ -1.58
PRKDC-202ENST00000338368 UQCRFS1P47985 274 aa5.2□□□□□ -1.58
PRKDC-202ENST00000338368 COTL1Q14019 142 aa5.2□□□□□ -1.58
PRKDC-202ENST00000338368 BPIFA4PQ86YQ2 179 aa5.2□□□□□ -1.58
PRKDC-202ENST00000338368 ARL6IP6Q8N6S5 226 aa5.2□□□□□ -1.58
PRKDC-202ENST00000338368 NHLRC2Q8NBF2 726 aa5.2□□□□□ -1.58
PRKDC-202ENST00000338368 MYO18BQ8IUG5 2567 aa5.2□□□□□ -1.58
PRKDC-202ENST00000338368 SLC31A2O15432 143 aa5.2□□□□□ -1.58
PRKDC-202ENST00000338368 IGLV1-44P01699 117 aa5.2□□□□□ -1.58
PRKDC-202ENST00000338368 GATA2P23769 480 aaPredicted RBP5.2□□□□□ -1.58
PRKDC-202ENST00000338368 CDKN1AP38936 164 aa5.2□□□□□ -1.58
PRKDC-202ENST00000338368 PRB3Q04118 309 aaPredicted RBP5.2□□□□□ -1.58
PRKDC-202ENST00000338368 TMEM200BQ69YZ2 307 aa5.2□□□□□ -1.58
PRKDC-202ENST00000338368 PACRGQ96M98 296 aaPredicted RBP5.2□□□□□ -1.58
PRKDC-202ENST00000338368 CCDC168Q8NDH2 2452 aa5.2□□□□□ -1.58
PRKDC-202ENST00000338368 HIST1H1EP10412 219 aaKnown RBP5.2□□□□□ -1.58
PRKDC-202ENST00000338368 SRD5A3Q9H8P0 318 aa5.2□□□□□ -1.58
PRKDC-202ENST00000338368 IER3P46695 156 aa5.2□□□□□ -1.58
PRKDC-202ENST00000338368 IBA57Q5T440 356 aaKnown RBP5.2□□□□□ -1.58
PRKDC-202ENST00000338368 RBM14Q96PK6 669 aaKnown RBP5.2□□□□□ -1.58
PRKDC-202ENST00000338368 ELOVL1Q9BW60 279 aa5.2□□□□□ -1.58
PRKDC-202ENST00000338368 FGF23Q9GZV9 251 aaPredicted RBP5.2□□□□□ -1.58
PRKDC-202ENST00000338368 PRR30Q53SZ7 412 aaPredicted RBP5.2□□□□□ -1.58
PRKDC-202ENST00000338368 TREML4Q6UXN2 200 aa5.2□□□□□ -1.58
PRKDC-202ENST00000338368 A0A1W2PS18 150 aa5.2□□□□□ -1.58
PRKDC-202ENST00000338368 RPL29P47914 159 aaKnown RBP5.2□□□□□ -1.58
PRKDC-202ENST00000338368 PRCDQ00LT1 54 aa5.2□□□□□ -1.58
PRKDC-202ENST00000338368 WISP2O76076 250 aa5.2□□□□□ -1.58
PRKDC-202ENST00000338368 TCF15Q12870 199 aa5.2□□□□□ -1.58
PRKDC-202ENST00000338368 TUBA4BQ9H853 241 aa5.2□□□□□ -1.58
PRKDC-202ENST00000338368 CBLN4Q9NTU7 201 aa5.2□□□□□ -1.58
PRKDC-202ENST00000338368 ZFYVE26Q68DK2 2539 aa5.2□□□□□ -1.58
PRKDC-202ENST00000338368 TMEM178BH3BS89 294 aa5.2□□□□□ -1.58
PRKDC-202ENST00000338368 MFAP4P55083 255 aa5.2□□□□□ -1.58
PRKDC-202ENST00000338368 NUP37Q8NFH4 326 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms