RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 TPPP2P59282 170 aa11.97□□□□□ -0.49
SEC13-201ENST00000337354 KIAA0141Q14154 515 aaPredicted RBP11.97□□□□□ -0.49
SEC13-201ENST00000337354 KHDC1LQ5JSQ8 128 aa11.97□□□□□ -0.49
SEC13-201ENST00000337354 FAM223AQ8IWN6 122 aa11.97□□□□□ -0.49
SEC13-201ENST00000337354 UXS1Q8NBZ7 420 aa11.97□□□□□ -0.49
SEC13-201ENST00000337354 NECAP1Q8NC96 275 aa11.97□□□□□ -0.49
SEC13-201ENST00000337354 M0QZ24 198 aa11.96□□□□□ -0.49
SEC13-201ENST00000337354 SNCAP37840 140 aa11.96□□□□□ -0.49
SEC13-201ENST00000337354 TNFRSF9Q07011 255 aa11.96□□□□□ -0.49
SEC13-201ENST00000337354 OXA1LQ15070 435 aa11.96□□□□□ -0.49
SEC13-201ENST00000337354 C2orf68Q2NKX9 166 aa11.96□□□□□ -0.49
SEC13-201ENST00000337354 LCNL1Q6ZST4 164 aa11.96□□□□□ -0.49
SEC13-201ENST00000337354 ZNF114Q8NC26 417 aa11.96□□□□□ -0.49
SEC13-201ENST00000337354 OR1P1Q8NH06 330 aa11.96□□□□□ -0.49
SEC13-201ENST00000337354 HIPK2Q9H2X6 1198 aa11.96□□□□□ -0.49
SEC13-201ENST00000337354 F11RQ9Y624 299 aaKnown RBP11.96□□□□□ -0.49
SEC13-201ENST00000337354 CEBPZOSA8MTT3 80 aa11.95□□□□□ -0.5
SEC13-201ENST00000337354 ADARB2-AS1A8MUL3 147 aa11.95□□□□□ -0.5
SEC13-201ENST00000337354 MED6O75586 246 aa11.95□□□□□ -0.5
SEC13-201ENST00000337354 LY86O95711 162 aa11.95□□□□□ -0.5
SEC13-201ENST00000337354 REG1AP05451 166 aa11.95□□□□□ -0.5
SEC13-201ENST00000337354 HOXA1P49639 335 aaPredicted RBP11.95□□□□□ -0.5
SEC13-201ENST00000337354 SUB1P53999 127 aaKnown RBP eCLIP11.95□□□□□ -0.51e-7■■■■■ 110.7
SEC13-201ENST00000337354 OR4F17Q8NGA8 305 aa11.95□□□□□ -0.5
SEC13-201ENST00000337354 C4orf3Q8WVX3 66 aa11.95□□□□□ -0.5
SEC13-201ENST00000337354 FANCD2OSQ96PS1 177 aa11.95□□□□□ -0.5
SEC13-201ENST00000337354 OR4F4Q96R69 305 aa11.95□□□□□ -0.5
SEC13-201ENST00000337354 TET2Q6N021 2002 aaPredicted RBP11.95□□□□□ -0.5
SEC13-201ENST00000337354 IGLV11-55A0A075B6I3 123 aa11.94□□□□□ -0.5
SEC13-201ENST00000337354 C13orf42A0A1B0GVH6 325 aa11.94□□□□□ -0.5
SEC13-201ENST00000337354 C7orf66A4D0T2 115 aa11.94□□□□□ -0.5
SEC13-201ENST00000337354 MPTX1A8MV57 137 aa11.94□□□□□ -0.5
SEC13-201ENST00000337354 NUDT19A8MXV4 375 aa11.94□□□□□ -0.5
SEC13-201ENST00000337354 PRH1P02810 166 aa11.94□□□□□ -0.5
SEC13-201ENST00000337354 ATP5IP56385 69 aaPredicted RBP11.94□□□□□ -0.5
SEC13-201ENST00000337354 RHOGP84095 191 aa11.94□□□□□ -0.5
SEC13-201ENST00000337354 RUNX1Q01196 453 aa11.94□□□□□ -0.5
SEC13-201ENST00000337354 ID3Q02535 119 aa11.94□□□□□ -0.5
SEC13-201ENST00000337354 ATP5G2Q06055 141 aa11.94□□□□□ -0.5
SEC13-201ENST00000337354 TATDN3Q17R31 274 aa11.94□□□□□ -0.5
SEC13-201ENST00000337354 IAH1Q2TAA2 248 aaPredicted RBP11.94□□□□□ -0.5
SEC13-201ENST00000337354 NSUN5P1Q3KNT7 163 aa11.94□□□□□ -0.5
SEC13-201ENST00000337354 SPINK9Q5DT21 86 aa11.94□□□□□ -0.5
SEC13-201ENST00000337354 FAM209BQ5JX69 171 aa11.94□□□□□ -0.5
SEC13-201ENST00000337354 P2RX4Q99571 388 aa11.94□□□□□ -0.5
SEC13-201ENST00000337354 HEYLQ9NQ87 328 aaPredicted RBP11.94□□□□□ -0.5
SEC13-201ENST00000337354 HTR2BP41595 481 aa11.93□□□□□ -0.5
SEC13-201ENST00000337354 SLC25A24Q6NUK1 477 aa11.93□□□□□ -0.5
SEC13-201ENST00000337354 GSG1LQ6UXU4 331 aa11.93□□□□□ -0.5
SEC13-201ENST00000337354 NOXA1Q86UR1 476 aa11.93□□□□□ -0.5
SEC13-201ENST00000337354 KLHL30-AS1Q8NEE0 82 aa11.93□□□□□ -0.5
SEC13-201ENST00000337354 OR4D5Q8NGN0 318 aa11.93□□□□□ -0.5
SEC13-201ENST00000337354 DTD1Q8TEA8 209 aa11.93□□□□□ -0.5
SEC13-201ENST00000337354 OR10C1Q96KK4 312 aa11.93□□□□□ -0.5
SEC13-201ENST00000337354 CXorf58Q96LI9 332 aa11.93□□□□□ -0.5
SEC13-201ENST00000337354 FBXL7Q9UJT9 491 aa11.93□□□□□ -0.5
SEC13-201ENST00000337354 U3KQ87 197 aa11.93□□□□□ -0.5
SEC13-201ENST00000337354 A0A1W2PRX2 142 aa11.92□□□□□ -0.5
SEC13-201ENST00000337354 C5orf51A6NDU8 294 aa11.92□□□□□ -0.5
SEC13-201ENST00000337354 CORTO00230 105 aa11.92□□□□□ -0.5
SEC13-201ENST00000337354 OR2J3O76001 311 aa11.92□□□□□ -0.5
SEC13-201ENST00000337354 NKX2-1P43699 371 aaPredicted RBP11.92□□□□□ -0.5
SEC13-201ENST00000337354 BSXQ3C1V8 233 aa11.92□□□□□ -0.5
SEC13-201ENST00000337354 PVRIGQ6DKI7 326 aa11.92□□□□□ -0.5
SEC13-201ENST00000337354 HIST2H2BDQ6DRA6 164 aa11.92□□□□□ -0.5
SEC13-201ENST00000337354 ZBTB8BQ8NAP8 495 aaPredicted RBP11.92□□□□□ -0.5
SEC13-201ENST00000337354 C2orf50Q96LR7 162 aa11.92□□□□□ -0.5
SEC13-201ENST00000337354 CIB3Q96Q77 187 aaPredicted RBP11.92□□□□□ -0.5
SEC13-201ENST00000337354 RBKSQ9H477 322 aa11.92□□□□□ -0.5
SEC13-201ENST00000337354 FAM25EA8MYX2 175 aa11.92□□□□□ -0.5
SEC13-201ENST00000337354 I3L521 148 aa11.92□□□□□ -0.5
SEC13-201ENST00000337354 SYNGR2O43760 224 aa11.92□□□□□ -0.5
SEC13-201ENST00000337354 SSNA1O43805 119 aa11.92□□□□□ -0.5
SEC13-201ENST00000337354 NXPH3O95157 252 aa11.92□□□□□ -0.5
SEC13-201ENST00000337354 NDUFB8O95169 186 aa11.92□□□□□ -0.5
SEC13-201ENST00000337354 LGALS1P09382 135 aaKnown RBP11.92□□□□□ -0.5
SEC13-201ENST00000337354 C15orf32Q32M92 178 aa11.92□□□□□ -0.5
SEC13-201ENST00000337354 ZNF343Q6P1L6 599 aa11.92□□□□□ -0.5
SEC13-201ENST00000337354 C19orf35Q6ZS72 473 aa11.92□□□□□ -0.5
SEC13-201ENST00000337354 VN1R17PQ8TDU5 208 aa11.92□□□□□ -0.5
SEC13-201ENST00000337354 GNB4Q9HAV0 340 aa11.92□□□□□ -0.5
SEC13-201ENST00000337354 GSKIPQ9P0R6 139 aa11.92□□□□□ -0.5
SEC13-201ENST00000337354 DMRT1Q9Y5R6 373 aa11.92□□□□□ -0.5
SEC13-201ENST00000337354 TNCP24821 2201 aa11.91□□□□□ -0.5
SEC13-201ENST00000337354 TRBV7-1A0A0A6YYK4 115 aa11.91□□□□□ -0.5
SEC13-201ENST00000337354 CCSO14618 274 aa11.91□□□□□ -0.5
SEC13-201ENST00000337354 RNASE2P10153 161 aaKnown RBP11.91□□□□□ -0.5
SEC13-201ENST00000337354 MYCNOSP40205 109 aa11.91□□□□□ -0.5
SEC13-201ENST00000337354 MFAP2P55001 183 aa11.91□□□□□ -0.5
SEC13-201ENST00000337354 RPP30P78346 268 aaKnown RBP11.91□□□□□ -0.5
SEC13-201ENST00000337354 CYCSP99999 105 aaKnown RBP11.91□□□□□ -0.5
SEC13-201ENST00000337354 C2orf83Q53S99 150 aa11.91□□□□□ -0.5
SEC13-201ENST00000337354 C18orf65Q6ZTR6 163 aa11.91□□□□□ -0.5
SEC13-201ENST00000337354 C8orf86Q6ZUL3 223 aa11.91□□□□□ -0.5
SEC13-201ENST00000337354 SLC24A4Q8NFF2 622 aa11.91□□□□□ -0.5
SEC13-201ENST00000337354 EEF1AKMT3Q96AZ1 226 aa11.91□□□□□ -0.5
SEC13-201ENST00000337354 ATP6V0BQ99437 205 aa11.91□□□□□ -0.5
SEC13-201ENST00000337354 RANGRFQ9HD47 186 aaPredicted RBP11.91□□□□□ -0.5
SEC13-201ENST00000337354 ALG5Q9Y673 324 aa11.91□□□□□ -0.5
SEC13-201ENST00000337354 PLXNB1O43157 2135 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms