RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 IGKCP01834 107 aa5.29□□□□□ -1.56
CSMD1-201ENST00000335551 MALP21145 153 aa5.29□□□□□ -1.56
CSMD1-201ENST00000335551 TMEM258P61165 79 aa5.29□□□□□ -1.56
CSMD1-201ENST00000335551 ATP5G2Q06055 141 aa5.29□□□□□ -1.56
CSMD1-201ENST00000335551 SRSF1Q07955 248 aaKnown RBP eCLIP5.29□□□□□ -1.56
CSMD1-201ENST00000335551 FAM181AQ8N9Y4 354 aa5.29□□□□□ -1.56
CSMD1-201ENST00000335551 WDR82Q6UXN9 313 aa5.29□□□□□ -1.56
CSMD1-201ENST00000335551 FGFRL1Q8N441 504 aa5.29□□□□□ -1.56
CSMD1-201ENST00000335551 RAMP1O60894 148 aa5.29□□□□□ -1.56
CSMD1-201ENST00000335551 UMODP07911 640 aa5.29□□□□□ -1.56
CSMD1-201ENST00000335551 PATE1Q8WXA2 126 aa5.29□□□□□ -1.56
CSMD1-201ENST00000335551 JMJD8Q96S16 334 aa5.29□□□□□ -1.56
CSMD1-201ENST00000335551 TMEM242Q9NWH2 141 aa5.29□□□□□ -1.56
CSMD1-201ENST00000335551 CXorf66Q5JRM2 361 aaPredicted RBP5.29□□□□□ -1.56
CSMD1-201ENST00000335551 ATP5L2Q7Z4Y8 100 aa5.29□□□□□ -1.56
CSMD1-201ENST00000335551 LRRC61Q9BV99 259 aa5.29□□□□□ -1.56
CSMD1-201ENST00000335551 IGKV3D-15A0A087WSY6 115 aa5.29□□□□□ -1.56
CSMD1-201ENST00000335551 VWC2LB2RUY7 222 aa5.29□□□□□ -1.56
CSMD1-201ENST00000335551 IGKV3-15P01624 115 aa5.29□□□□□ -1.56
CSMD1-201ENST00000335551 ZNF708P17019 499 aa5.29□□□□□ -1.56
CSMD1-201ENST00000335551 KIAA0040Q15053 153 aa5.29□□□□□ -1.56
CSMD1-201ENST00000335551 OCIAD2Q56VL3 154 aa5.29□□□□□ -1.56
CSMD1-201ENST00000335551 COQ2Q96H96 371 aa5.29□□□□□ -1.56
CSMD1-201ENST00000335551 INAFM2P0DMQ5 153 aa5.29□□□□□ -1.56
CSMD1-201ENST00000335551 C8orf82Q6P1X6 216 aaPredicted RBP5.29□□□□□ -1.56
CSMD1-201ENST00000335551 RPRMQ9NS64 109 aa5.29□□□□□ -1.56
CSMD1-201ENST00000335551 SRP19P09132 144 aaKnown RBP5.29□□□□□ -1.56
CSMD1-201ENST00000335551 TMEM187Q14656 261 aa5.29□□□□□ -1.56
CSMD1-201ENST00000335551 RASL11AQ6T310 242 aa5.29□□□□□ -1.56
CSMD1-201ENST00000335551 M0R381 172 aa5.29□□□□□ -1.56
CSMD1-201ENST00000335551 HMGA1P17096 107 aaKnown RBP5.29□□□□□ -1.56
CSMD1-201ENST00000335551 TMEM42Q69YG0 159 aa5.29□□□□□ -1.56
CSMD1-201ENST00000335551 C2orf82Q6UX34 121 aa5.29□□□□□ -1.56
CSMD1-201ENST00000335551 IGHV3OR15-7A0A075B7D8 119 aa5.29□□□□□ -1.56
CSMD1-201ENST00000335551 REG1BP48304 166 aa5.29□□□□□ -1.56
CSMD1-201ENST00000335551 C1orf100Q5SVJ3 147 aa5.29□□□□□ -1.56
CSMD1-201ENST00000335551 HIST3H2BBQ8N257 126 aa5.29□□□□□ -1.56
CSMD1-201ENST00000335551 EEF1AKMT3Q96AZ1 226 aa5.29□□□□□ -1.56
CSMD1-201ENST00000335551 DNAJC30Q96LL9 226 aa5.29□□□□□ -1.56
CSMD1-201ENST00000335551 SEPSECSQ9HD40 501 aaKnown RBP5.28□□□□□ -1.56
CSMD1-201ENST00000335551 SEMA5BQ9P283 1151 aa5.28□□□□□ -1.56
CSMD1-201ENST00000335551 CCL4L1Q8NHW4 92 aa5.28□□□□□ -1.56
CSMD1-201ENST00000335551 ASCL2Q99929 193 aa5.28□□□□□ -1.56
CSMD1-201ENST00000335551 ACACBO00763 2458 aa5.28□□□□□ -1.56
CSMD1-201ENST00000335551 TRACP01848 142 aa5.28□□□□□ -1.56
CSMD1-201ENST00000335551 IL11P20809 199 aa5.28□□□□□ -1.56
CSMD1-201ENST00000335551 C1orf194Q5T5A4 169 aa5.28□□□□□ -1.56
CSMD1-201ENST00000335551 LRP5O75197 1615 aa5.28□□□□□ -1.56
CSMD1-201ENST00000335551 BGLAPP02818 100 aa5.28□□□□□ -1.56
CSMD1-201ENST00000335551 HOXD3P31249 432 aaPredicted RBP5.28□□□□□ -1.56
CSMD1-201ENST00000335551 FAM90A2PQ658T7 463 aa5.28□□□□□ -1.56
CSMD1-201ENST00000335551 SSC4DQ8WTU2 575 aa5.28□□□□□ -1.56
CSMD1-201ENST00000335551 NABP2Q9BQ15 211 aa5.28□□□□□ -1.56
CSMD1-201ENST00000335551 CHTOPQ9Y3Y2 248 aaKnown RBP5.28□□□□□ -1.56
CSMD1-201ENST00000335551 EDIL3O43854 480 aa5.28□□□□□ -1.56
CSMD1-201ENST00000335551 NANOS3P60323 173 aaKnown RBP5.28□□□□□ -1.56
CSMD1-201ENST00000335551 CCL7P80098 99 aa5.28□□□□□ -1.56
CSMD1-201ENST00000335551 TNFRSF14Q92956 283 aa5.28□□□□□ -1.56
CSMD1-201ENST00000335551 ANKHD1Q8IWZ3 2542 aaKnown RBP5.28□□□□□ -1.56
CSMD1-201ENST00000335551 KLK10O43240 276 aa5.28□□□□□ -1.56
CSMD1-201ENST00000335551 ZNF205O95201 554 aa5.28□□□□□ -1.56
CSMD1-201ENST00000335551 NAPSAO96009 420 aa5.28□□□□□ -1.56
CSMD1-201ENST00000335551 C1QTNF9P0C862 333 aa5.28□□□□□ -1.56
CSMD1-201ENST00000335551 SOX8P57073 446 aa5.28□□□□□ -1.56
CSMD1-201ENST00000335551 PRSS53Q2L4Q9 553 aa5.28□□□□□ -1.56
CSMD1-201ENST00000335551 FAM27BQ5VT28 67 aa5.28□□□□□ -1.56
CSMD1-201ENST00000335551 FER1L6-AS1Q8NA97 138 aa5.28□□□□□ -1.56
CSMD1-201ENST00000335551 TMEM186Q96B77 213 aa5.28□□□□□ -1.56
CSMD1-201ENST00000335551 PEX11BO96011 259 aa5.28□□□□□ -1.56
CSMD1-201ENST00000335551 SP9P0CG40 484 aa5.28□□□□□ -1.56
CSMD1-201ENST00000335551 UNC119Q13432 240 aa5.28□□□□□ -1.56
CSMD1-201ENST00000335551 LAGE3Q14657 143 aa5.28□□□□□ -1.56
CSMD1-201ENST00000335551 SHISA5Q8N114 240 aa5.28□□□□□ -1.56
CSMD1-201ENST00000335551 PTGDSP41222 190 aa5.28□□□□□ -1.56
CSMD1-201ENST00000335551 TCF19Q9Y242 345 aa5.28□□□□□ -1.56
CSMD1-201ENST00000335551 SF3B6Q9Y3B4 125 aaKnown RBP5.28□□□□□ -1.56
CSMD1-201ENST00000335551 CCL27Q9Y4X3 112 aa5.28□□□□□ -1.56
CSMD1-201ENST00000335551 SPTY2D1-AS1A0A0U1RR47 76 aa5.28□□□□□ -1.56
CSMD1-201ENST00000335551 NPIPB11E5RHQ5 1161 aa5.28□□□□□ -1.56
CSMD1-201ENST00000335551 TOMM40O96008 361 aa5.28□□□□□ -1.56
CSMD1-201ENST00000335551 IFITM1P13164 125 aa5.28□□□□□ -1.56
CSMD1-201ENST00000335551 RHOGP84095 191 aa5.28□□□□□ -1.56
CSMD1-201ENST00000335551 FBXW9Q5XUX1 488 aa5.28□□□□□ -1.56
CSMD1-201ENST00000335551 LOXL4Q96JB6 756 aa5.28□□□□□ -1.56
CSMD1-201ENST00000335551 TRAV24A0A0B4J272 114 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 GPR6P46095 362 aaPredicted RBP5.27□□□□□ -1.57
CSMD1-201ENST00000335551 POU2AF1Q16633 256 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 SLC25A53Q5H9E4 307 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 FHL5Q5TD97 284 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 CD200R1LQ6Q8B3 271 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 GGTLC1Q9BX51 225 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 FOXQ1Q9C009 403 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 PRRT4C9JH25 899 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 ICAM4Q14773 271 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 HEPN1Q6WQI6 88 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 DUX5Q96PT3 197 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 ADMP35318 185 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 ZNF818PQ6ZRF7 136 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 SPRED2Q7Z698 418 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 Q96M66 194 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms