RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 RPL8P62917 257 aaKnown RBP12.06□□□□□ -0.48
CLCNKA-201ENST00000331433 PRR20EP86478 221 aa12.06□□□□□ -0.48
CLCNKA-201ENST00000331433 PRR20CP86479 221 aa12.06□□□□□ -0.48
CLCNKA-201ENST00000331433 PRR20DP86480 221 aa12.06□□□□□ -0.48
CLCNKA-201ENST00000331433 PRR20BP86481 221 aa12.06□□□□□ -0.48
CLCNKA-201ENST00000331433 PRR20AP86496 221 aa12.06□□□□□ -0.48
CLCNKA-201ENST00000331433 PRB3Q04118 309 aaPredicted RBP12.06□□□□□ -0.48
CLCNKA-201ENST00000331433 TMEM177Q53S58 311 aa12.06□□□□□ -0.48
CLCNKA-201ENST00000331433 NABP2Q9BQ15 211 aa12.06□□□□□ -0.48
CLCNKA-201ENST00000331433 COMMD5Q9GZQ3 224 aa12.06□□□□□ -0.48
CLCNKA-201ENST00000331433 FKBP11Q9NYL4 201 aa12.06□□□□□ -0.48
CLCNKA-201ENST00000331433 RAXQ9Y2V3 346 aa12.06□□□□□ -0.48
CLCNKA-201ENST00000331433 IFITM10A6NMD0 228 aa12.05□□□□□ -0.48
CLCNKA-201ENST00000331433 NDUFS6O75380 124 aaKnown RBP12.05□□□□□ -0.48
CLCNKA-201ENST00000331433 LINC00869P0C866 280 aa12.05□□□□□ -0.48
CLCNKA-201ENST00000331433 TRGC1P0CF51 173 aa12.05□□□□□ -0.48
CLCNKA-201ENST00000331433 RNASE2P10153 161 aaKnown RBP12.05□□□□□ -0.48
CLCNKA-201ENST00000331433 HOXA5P20719 270 aa12.05□□□□□ -0.48
CLCNKA-201ENST00000331433 GALR1P47211 349 aa12.05□□□□□ -0.48
CLCNKA-201ENST00000331433 RHOBP62745 196 aa12.05□□□□□ -0.48
CLCNKA-201ENST00000331433 TMEM155Q4W5P6 130 aa12.05□□□□□ -0.48
CLCNKA-201ENST00000331433 C10orf55Q5SWW7 151 aa12.05□□□□□ -0.48
CLCNKA-201ENST00000331433 KAAG1Q9UBP8 84 aa12.05□□□□□ -0.48
CLCNKA-201ENST00000331433 YTHDF2Q9Y5A9 579 aaKnown RBP12.05□□□□□ -0.48
CLCNKA-201ENST00000331433 CHD8Q9HCK8 2581 aa12.05□□□□□ -0.48
CLCNKA-201ENST00000331433 GCHFRP30047 84 aa12.05□□□□□ -0.48
CLCNKA-201ENST00000331433 GAMTQ14353 236 aa12.05□□□□□ -0.48
CLCNKA-201ENST00000331433 C2orf83Q53S99 150 aa12.05□□□□□ -0.48
CLCNKA-201ENST00000331433 LINC01551Q86U37 167 aa12.05□□□□□ -0.48
CLCNKA-201ENST00000331433 ZNF114Q8NC26 417 aa12.05□□□□□ -0.48
CLCNKA-201ENST00000331433 OR4C13Q8NGP0 309 aa12.05□□□□□ -0.48
CLCNKA-201ENST00000331433 ST6GALNAC6Q969X2 333 aa12.05□□□□□ -0.48
CLCNKA-201ENST00000331433 NDUFA4L2Q9NRX3 87 aa12.05□□□□□ -0.48
CLCNKA-201ENST00000331433 SCO2A0A1W2PP80 73 aa12.04□□□□□ -0.48
CLCNKA-201ENST00000331433 B9A039 149 aa12.04□□□□□ -0.48
CLCNKA-201ENST00000331433 SIAH2O43255 324 aa12.04□□□□□ -0.48
CLCNKA-201ENST00000331433 VENTXO95231 258 aa12.04□□□□□ -0.48
CLCNKA-201ENST00000331433 CHRNA7P36544 502 aa12.04□□□□□ -0.48
CLCNKA-201ENST00000331433 FAM78BQ5VT40 261 aa12.04□□□□□ -0.48
CLCNKA-201ENST00000331433 GFI1BQ5VTD9 330 aa12.04□□□□□ -0.48
CLCNKA-201ENST00000331433 MIR17HGQ75NE6 70 aa12.04□□□□□ -0.48
CLCNKA-201ENST00000331433 TMEM144Q7Z5S9 345 aa12.04□□□□□ -0.48
CLCNKA-201ENST00000331433 OR4P4Q8NGL7 312 aa12.04□□□□□ -0.48
CLCNKA-201ENST00000331433 OR5B12Q96R08 314 aa12.04□□□□□ -0.48
CLCNKA-201ENST00000331433 SLC45A2Q9UMX9 530 aa12.04□□□□□ -0.48
CLCNKA-201ENST00000331433 NCOR2Q9Y618 2525 aa12.04□□□□□ -0.48
CLCNKA-201ENST00000331433 TRBV20OR9-2A0A075B6H5 130 aa12.04□□□□□ -0.48
CLCNKA-201ENST00000331433 PHOX2AO14813 284 aa12.04□□□□□ -0.48
CLCNKA-201ENST00000331433 IGHV1-8P0DP01 117 aa12.04□□□□□ -0.48
CLCNKA-201ENST00000331433 C11orf42Q8N5U0 333 aa12.04□□□□□ -0.48
CLCNKA-201ENST00000331433 LINC00311Q8N616 119 aa12.04□□□□□ -0.48
CLCNKA-201ENST00000331433 OR9G1Q8NH87 305 aa12.04□□□□□ -0.48
CLCNKA-201ENST00000331433 TMEM186Q96B77 213 aa12.04□□□□□ -0.48
CLCNKA-201ENST00000331433 COL6A6A6NMZ7 2263 aa12.04□□□□□ -0.48
CLCNKA-201ENST00000331433 IGHV3-72A0A0B4J1Y9 119 aa12.03□□□□□ -0.48
CLCNKA-201ENST00000331433 A0A1W2PPQ1 181 aa12.03□□□□□ -0.48
CLCNKA-201ENST00000331433 FNDC10F2Z333 226 aa12.03□□□□□ -0.48
CLCNKA-201ENST00000331433 F6UZH7 168 aa12.03□□□□□ -0.48
CLCNKA-201ENST00000331433 OR10J1P30954 320 aa12.03□□□□□ -0.48
CLCNKA-201ENST00000331433 CDX1P47902 265 aaPredicted RBP12.03□□□□□ -0.48
CLCNKA-201ENST00000331433 CASP6P55212 293 aa12.03□□□□□ -0.48
CLCNKA-201ENST00000331433 PDZD11Q5EBL8 140 aa12.03□□□□□ -0.48
CLCNKA-201ENST00000331433 TGIF2LXQ8IUE1 241 aa12.03□□□□□ -0.48
CLCNKA-201ENST00000331433 OR1L8Q8NGR8 309 aa12.03□□□□□ -0.48
CLCNKA-201ENST00000331433 ZNF596Q8TC21 504 aa12.03□□□□□ -0.48
CLCNKA-201ENST00000331433 RITA1Q96K30 269 aa12.03□□□□□ -0.48
CLCNKA-201ENST00000331433 TCEAL7Q9BRU2 100 aa12.03□□□□□ -0.48
CLCNKA-201ENST00000331433 IGLV2-23P01705 113 aa12.03□□□□□ -0.48
CLCNKA-201ENST00000331433 C1QTNF9P0C862 333 aa12.03□□□□□ -0.48
CLCNKA-201ENST00000331433 S100PP25815 95 aa12.03□□□□□ -0.48
CLCNKA-201ENST00000331433 CDSNQ15517 529 aa12.03□□□□□ -0.48
CLCNKA-201ENST00000331433 PDPNQ86YL7 162 aa12.03□□□□□ -0.48
CLCNKA-201ENST00000331433 PCGF1Q9BSM1 259 aa12.03□□□□□ -0.48
CLCNKA-201ENST00000331433 TPSG1Q9NRR2 321 aa12.03□□□□□ -0.48
CLCNKA-201ENST00000331433 CCL21O00585 134 aa12.02□□□□□ -0.48
CLCNKA-201ENST00000331433 USF1P22415 310 aaPredicted RBP12.02□□□□□ -0.48
CLCNKA-201ENST00000331433 CA7P43166 264 aa12.02□□□□□ -0.48
CLCNKA-201ENST00000331433 MUC15Q8N387 334 aa12.02□□□□□ -0.48
CLCNKA-201ENST00000331433 C8orf31Q8N9H6 132 aa12.02□□□□□ -0.48
CLCNKA-201ENST00000331433 ANAPC16Q96DE5 110 aa12.02□□□□□ -0.48
CLCNKA-201ENST00000331433 PYGO2Q9BRQ0 406 aa12.02□□□□□ -0.48
CLCNKA-201ENST00000331433 ZNF430Q9H8G1 570 aaPredicted RBP12.02□□□□□ -0.48
CLCNKA-201ENST00000331433 NIT2Q9NQR4 276 aa12.02□□□□□ -0.48
CLCNKA-201ENST00000331433 WASHC3Q9Y3C0 194 aa12.02□□□□□ -0.48
CLCNKA-201ENST00000331433 CGB1A6NKQ9 187 aa12.02□□□□□ -0.49
CLCNKA-201ENST00000331433 SLC25A17O43808 307 aa12.02□□□□□ -0.49
CLCNKA-201ENST00000331433 HNF1AP20823 631 aa12.02□□□□□ -0.49
CLCNKA-201ENST00000331433 WT1-ASQ06250 92 aa12.02□□□□□ -0.49
CLCNKA-201ENST00000331433 CD69Q07108 199 aa12.02□□□□□ -0.49
CLCNKA-201ENST00000331433 OR2T6Q8NHC8 308 aa12.02□□□□□ -0.49
CLCNKA-201ENST00000331433 TMEM167AQ8TBQ9 72 aa12.02□□□□□ -0.49
CLCNKA-201ENST00000331433 A0A087X0M5 115 aa12.01□□□□□ -0.49
CLCNKA-201ENST00000331433 A0A1B0GX30 115 aa12.01□□□□□ -0.49
CLCNKA-201ENST00000331433 SOD3P08294 240 aa12.01□□□□□ -0.49
CLCNKA-201ENST00000331433 ERHP84090 104 aaKnown RBP12.01□□□□□ -0.49
CLCNKA-201ENST00000331433 FAM71F2Q6NXP2 309 aa12.01□□□□□ -0.49
CLCNKA-201ENST00000331433 OR4X1Q8NH49 305 aa12.01□□□□□ -0.49
CLCNKA-201ENST00000331433 ACY3Q96HD9 319 aa12.01□□□□□ -0.49
CLCNKA-201ENST00000331433 TMEM133Q9H2Q1 129 aa12.01□□□□□ -0.49
CLCNKA-201ENST00000331433 SRD5A3Q9H8P0 318 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms