RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 KLK15Q9H2R5 256 aa9.14□□□□□ -0.95
SNRNP200-201ENST00000323853 GTF3AQ92664 365 aaKnown RBP9.13□□□□□ -0.95
SNRNP200-201ENST00000323853 CHODLQ9H9P2 273 aa9.13□□□□□ -0.95
SNRNP200-201ENST00000323853 IGKV1D-8A0A087WSZ0 117 aa9.13□□□□□ -0.95
SNRNP200-201ENST00000323853 FAM90A9PA6NNJ1 464 aa9.13□□□□□ -0.95
SNRNP200-201ENST00000323853 APOHP02749 345 aaPredicted RBP9.13□□□□□ -0.95
SNRNP200-201ENST00000323853 TFF1P04155 84 aa9.13□□□□□ -0.95
SNRNP200-201ENST00000323853 ADMP35318 185 aa9.13□□□□□ -0.95
SNRNP200-201ENST00000323853 ZFP36L1Q07352 338 aaKnown RBP9.13□□□□□ -0.95
SNRNP200-201ENST00000323853 A0A1B0GW15 77 aa9.13□□□□□ -0.95
SNRNP200-201ENST00000323853 NPFFO15130 113 aa9.13□□□□□ -0.95
SNRNP200-201ENST00000323853 CTAG1AP78358 180 aa9.13□□□□□ -0.95
SNRNP200-201ENST00000323853 NABP1Q96AH0 204 aa9.13□□□□□ -0.95
SNRNP200-201ENST00000323853 OTORQ9NRC9 128 aa9.13□□□□□ -0.95
SNRNP200-201ENST00000323853 C17orf100A8MU93 164 aa9.13□□□□□ -0.95
SNRNP200-201ENST00000323853 FAM159AQ6UWV7 190 aa9.13□□□□□ -0.95
SNRNP200-201ENST00000323853 WNT10AQ9GZT5 417 aa9.13□□□□□ -0.95
SNRNP200-201ENST00000323853 SMIM13P0DJ93 91 aa9.13□□□□□ -0.95
SNRNP200-201ENST00000323853 CFHR1Q03591 330 aa9.13□□□□□ -0.95
SNRNP200-201ENST00000323853 FAM131CQ96AQ9 280 aa9.13□□□□□ -0.95
SNRNP200-201ENST00000323853 IGHV1-18A0A0C4DH31 117 aa9.12□□□□□ -0.95
SNRNP200-201ENST00000323853 GATA2P23769 480 aaPredicted RBP9.12□□□□□ -0.95
SNRNP200-201ENST00000323853 CD69Q07108 199 aa9.12□□□□□ -0.95
SNRNP200-201ENST00000323853 FAM74A4Q5TZK3 123 aa9.12□□□□□ -0.95
SNRNP200-201ENST00000323853 TMEM170AQ8WVE7 144 aa9.12□□□□□ -0.95
SNRNP200-201ENST00000323853 ASIPP42127 132 aa9.12□□□□□ -0.95
SNRNP200-201ENST00000323853 ZIC4Q8N9L1 334 aa9.12□□□□□ -0.95
SNRNP200-201ENST00000323853 COPS9Q8WXC6 57 aa9.12□□□□□ -0.95
SNRNP200-201ENST00000323853 ZNF414Q96IQ9 312 aa9.12□□□□□ -0.95
SNRNP200-201ENST00000323853 A1L4Q6 167 aa9.12□□□□□ -0.95
SNRNP200-201ENST00000323853 OR9G9P0C7N8 305 aa9.12□□□□□ -0.95
SNRNP200-201ENST00000323853 FOXA3P55318 350 aaPredicted RBP9.12□□□□□ -0.95
SNRNP200-201ENST00000323853 TAS2R60P59551 318 aa9.12□□□□□ -0.95
SNRNP200-201ENST00000323853 DICER1Q9UPY3 1922 aaKnown RBP9.12□□□□□ -0.95
SNRNP200-201ENST00000323853 EFNA2O43921 213 aa9.12□□□□□ -0.95
SNRNP200-201ENST00000323853 ZNF256Q9Y2P7 627 aaPredicted RBP9.12□□□□□ -0.95
SNRNP200-201ENST00000323853 KIR2DL4Q99706 377 aa9.12□□□□□ -0.95
SNRNP200-201ENST00000323853 IGHV3-35A0A0C4DH35 117 aa9.12□□□□□ -0.95
SNRNP200-201ENST00000323853 LEMD1Q68G75 181 aa9.12□□□□□ -0.95
SNRNP200-201ENST00000323853 TMEM105Q8N8V8 129 aa9.12□□□□□ -0.95
SNRNP200-201ENST00000323853 GGNQ86UU5 652 aa9.11□□□□□ -0.95
SNRNP200-201ENST00000323853 ARL6IP6Q8N6S5 226 aa9.11□□□□□ -0.95
SNRNP200-201ENST00000323853 C21orf62Q9NYP8 219 aa9.11□□□□□ -0.95
SNRNP200-201ENST00000323853 GFRA3O60609 400 aa9.11□□□□□ -0.95
SNRNP200-201ENST00000323853 TMEM160Q9NX00 188 aa9.11□□□□□ -0.95
SNRNP200-201ENST00000323853 NTN3O00634 580 aaPredicted RBP9.11□□□□□ -0.95
SNRNP200-201ENST00000323853 CD55P08174 381 aa9.11□□□□□ -0.95
SNRNP200-201ENST00000323853 GNG5P63218 68 aa9.11□□□□□ -0.95
SNRNP200-201ENST00000323853 PIKFYVEQ9Y2I7 2098 aa9.11□□□□□ -0.95
SNRNP200-201ENST00000323853 LDLRAD4O15165 306 aa9.11□□□□□ -0.95
SNRNP200-201ENST00000323853 TMEM144Q7Z5S9 345 aa9.11□□□□□ -0.95
SNRNP200-201ENST00000323853 ABHD17AQ96GS6 310 aa9.11□□□□□ -0.95
SNRNP200-201ENST00000323853 MESP1Q9BRJ9 268 aa9.11□□□□□ -0.95
SNRNP200-201ENST00000323853 ATG2BQ96BY7 2078 aa9.11□□□□□ -0.95
SNRNP200-201ENST00000323853 GBF1Q92538 1859 aa9.11□□□□□ -0.95
SNRNP200-201ENST00000323853 CENPVQ7Z7K6 275 aaPredicted RBP9.11□□□□□ -0.95
SNRNP200-201ENST00000323853 TCF23Q7RTU1 214 aa9.11□□□□□ -0.95
SNRNP200-201ENST00000323853 VSIRQ9H7M9 311 aa9.11□□□□□ -0.95
SNRNP200-201ENST00000323853 THSD7BQ9C0I4 1608 aa9.1□□□□□ -0.95
SNRNP200-201ENST00000323853 IGKV1-12A0A0C4DH73 117 aa9.1□□□□□ -0.95
SNRNP200-201ENST00000323853 A0A1B0GUT8 65 aa9.1□□□□□ -0.95
SNRNP200-201ENST00000323853 C1QTNF9BB2RNN3 333 aa9.1□□□□□ -0.95
SNRNP200-201ENST00000323853 IGKV1D-12P01611 117 aa9.1□□□□□ -0.95
SNRNP200-201ENST00000323853 ID3Q02535 119 aa9.1□□□□□ -0.95
SNRNP200-201ENST00000323853 Q6AWC8 147 aa9.1□□□□□ -0.95
SNRNP200-201ENST00000323853 CYTL1Q9NRR1 136 aa9.1□□□□□ -0.95
SNRNP200-201ENST00000323853 IGKV1-27A0A075B6S5 117 aa9.1□□□□□ -0.95
SNRNP200-201ENST00000323853 IGHV3OR16-13A0A075B7E8 117 aa9.1□□□□□ -0.95
SNRNP200-201ENST00000323853 IGHV3-74A0A0B4J1X5 117 aa9.1□□□□□ -0.95
SNRNP200-201ENST00000323853 CCL3L1P16619 93 aa9.1□□□□□ -0.95
SNRNP200-201ENST00000323853 CLEC19AQ6UXS0 136 aa9.1□□□□□ -0.95
SNRNP200-201ENST00000323853 CIARTQ8N365 385 aaPredicted RBP9.1□□□□□ -0.95
SNRNP200-201ENST00000323853 RNASE7Q9H1E1 156 aaKnown RBP9.1□□□□□ -0.95
SNRNP200-201ENST00000323853 PNRC2Q9NPJ4 139 aaKnown RBP9.1□□□□□ -0.95
SNRNP200-201ENST00000323853 CCL20P78556 96 aa9.1□□□□□ -0.95
SNRNP200-201ENST00000323853 C1QTNF9P0C862 333 aa9.1□□□□□ -0.95
SNRNP200-201ENST00000323853 CEACAM1P13688 526 aa9.1□□□□□ -0.95
SNRNP200-201ENST00000323853 GPR183P32249 361 aa9.1□□□□□ -0.95
SNRNP200-201ENST00000323853 CIRBPQ14011 172 aaKnown RBP9.1□□□□□ -0.95
SNRNP200-201ENST00000323853 SEMA5BQ9P283 1151 aa9.1□□□□□ -0.95
SNRNP200-201ENST00000323853 TCRBV4S1A1TA0A5B7 111 aa9.09□□□□□ -0.95
SNRNP200-201ENST00000323853 NBR2O15453 112 aa9.09□□□□□ -0.95
SNRNP200-201ENST00000323853 LHFPL1Q86WI0 220 aa9.09□□□□□ -0.95
SNRNP200-201ENST00000323853 C18orf15Q96N68 181 aa9.09□□□□□ -0.95
SNRNP200-201ENST00000323853 PEF1Q9UBV8 284 aaKnown RBP9.09□□□□□ -0.95
SNRNP200-201ENST00000323853 IGKV3-20P01619 116 aa9.09□□□□□ -0.95
SNRNP200-201ENST00000323853 RNASE4P34096 147 aaKnown RBP9.09□□□□□ -0.95
SNRNP200-201ENST00000323853 PRCDQ00LT1 54 aa9.09□□□□□ -0.95
SNRNP200-201ENST00000323853 FER1L6-AS1Q8NA97 138 aa9.09□□□□□ -0.95
SNRNP200-201ENST00000323853 SCN8AQ9UQD0 1980 aa9.09□□□□□ -0.95
SNRNP200-201ENST00000323853 HIGD1CA8MV81 97 aa9.09□□□□□ -0.95
SNRNP200-201ENST00000323853 DUTP33316 252 aaKnown RBP9.09□□□□□ -0.95
SNRNP200-201ENST00000323853 IGHV3-49A0A0A0MS15 119 aa9.09□□□□□ -0.95
SNRNP200-201ENST00000323853 UBE2CO00762 179 aa9.08□□□□□ -0.96
SNRNP200-201ENST00000323853 C14orf144Q96I85 54 aa9.08□□□□□ -0.96
SNRNP200-201ENST00000323853 TMEM133Q9H2Q1 129 aa9.08□□□□□ -0.96
SNRNP200-201ENST00000323853 SCN5AQ14524 2016 aa9.08□□□□□ -0.96
SNRNP200-201ENST00000323853 MUC21A0A0G2JKD1 596 aa9.08□□□□□ -0.96
SNRNP200-201ENST00000323853 MUC21A0A140T8X8 626 aa9.08□□□□□ -0.96
SNRNP200-201ENST00000323853 SERF1AO75920 110 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms