RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 DIDO1Q9BTC0 2240 aaKnown RBP10.76□□□□□ -0.69
CPNE1-201ENST00000317677 IGHV1-69-2A0A0G2JMI3 117 aa10.76□□□□□ -0.69
CPNE1-201ENST00000317677 C17orf100A8MU93 164 aa10.76□□□□□ -0.69
CPNE1-201ENST00000317677 C15orf65H3BRN8 121 aa10.76□□□□□ -0.69
CPNE1-201ENST00000317677 K7ERU9 68 aa10.76□□□□□ -0.69
CPNE1-201ENST00000317677 CST7O76096 145 aa10.76□□□□□ -0.69
CPNE1-201ENST00000317677 PLAUP00749 431 aa10.76□□□□□ -0.69
CPNE1-201ENST00000317677 REG1AP05451 166 aa10.76□□□□□ -0.69
CPNE1-201ENST00000317677 ADH4P08319 380 aa10.76□□□□□ -0.69
CPNE1-201ENST00000317677 SSTR5P35346 364 aa10.76□□□□□ -0.69
CPNE1-201ENST00000317677 LINC00310P59036 64 aa10.76□□□□□ -0.69
CPNE1-201ENST00000317677 SPATA45Q537H7 98 aa10.76□□□□□ -0.69
CPNE1-201ENST00000317677 LCN15Q6UWW0 184 aa10.76□□□□□ -0.69
CPNE1-201ENST00000317677 Q6ZN92 141 aa10.76□□□□□ -0.69
CPNE1-201ENST00000317677 SSX8Q7RTT4 187 aa10.76□□□□□ -0.69
CPNE1-201ENST00000317677 RNASE6Q93091 150 aaKnown RBP10.76□□□□□ -0.69
CPNE1-201ENST00000317677 A0A0U1RQK1 487 aa10.75□□□□□ -0.69
CPNE1-201ENST00000317677 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.75□□□□□ -0.69
CPNE1-201ENST00000317677 ZNF320A2RRD8 509 aa10.75□□□□□ -0.69
CPNE1-201ENST00000317677 OOEPA6NGQ2 149 aa10.75□□□□□ -0.69
CPNE1-201ENST00000317677 TMEM50AO95807 157 aa10.75□□□□□ -0.69
CPNE1-201ENST00000317677 CD33P20138 364 aa10.75□□□□□ -0.69
CPNE1-201ENST00000317677 CCL8P80075 99 aa10.75□□□□□ -0.69
CPNE1-201ENST00000317677 EDDM3AQ14507 147 aa10.75□□□□□ -0.69
CPNE1-201ENST00000317677 STUMQ69YW2 141 aa10.75□□□□□ -0.69
CPNE1-201ENST00000317677 ZNF709Q8N972 641 aa10.75□□□□□ -0.69
CPNE1-201ENST00000317677 TXN2Q99757 166 aa10.75□□□□□ -0.69
CPNE1-201ENST00000317677 TANC2Q9HCD6 1990 aa10.75□□□□□ -0.69
CPNE1-201ENST00000317677 NAV2Q8IVL1 2488 aa10.75□□□□□ -0.69
CPNE1-201ENST00000317677 ARFGEF3Q5TH69 2177 aa10.74□□□□□ -0.69
CPNE1-201ENST00000317677 TRAV9-1A0A075B6T8 112 aa10.74□□□□□ -0.69
CPNE1-201ENST00000317677 M0QZ24 198 aa10.74□□□□□ -0.69
CPNE1-201ENST00000317677 SSSCA1O60232 199 aa10.74□□□□□ -0.69
CPNE1-201ENST00000317677 GYPAP02724 150 aa10.74□□□□□ -0.69
CPNE1-201ENST00000317677 UNQ5815/PRO19632Q6UWF5 114 aa10.74□□□□□ -0.69
CPNE1-201ENST00000317677 TCF24Q7RTU0 167 aa10.74□□□□□ -0.69
CPNE1-201ENST00000317677 TCTEX1D1Q8N7M0 179 aa10.74□□□□□ -0.69
CPNE1-201ENST00000317677 PARLQ9H300 379 aa10.74□□□□□ -0.69
CPNE1-201ENST00000317677 CHODLQ9H9P2 273 aa10.74□□□□□ -0.69
CPNE1-201ENST00000317677 HCFC1P51610 2035 aa10.74□□□□□ -0.69
CPNE1-201ENST00000317677 DOPEY1Q5JWR5 2465 aa10.74□□□□□ -0.69
CPNE1-201ENST00000317677 PKDREJQ9NTG1 2253 aa10.74□□□□□ -0.69
CPNE1-201ENST00000317677 IGHV2-26A0A0B4J1V2 119 aa10.74□□□□□ -0.69
CPNE1-201ENST00000317677 A0A1B0GUS0 222 aa10.74□□□□□ -0.69
CPNE1-201ENST00000317677 H0Y980 276 aa10.74□□□□□ -0.69
CPNE1-201ENST00000317677 F2RP25116 425 aa10.74□□□□□ -0.69
CPNE1-201ENST00000317677 TSPOP30536 169 aa10.74□□□□□ -0.69
CPNE1-201ENST00000317677 PSMB3P49720 205 aa10.74□□□□□ -0.69
CPNE1-201ENST00000317677 PAX9P55771 341 aa10.74□□□□□ -0.69
CPNE1-201ENST00000317677 FGFRL1Q8N441 504 aa10.74□□□□□ -0.69
CPNE1-201ENST00000317677 DRAM1Q8N682 238 aa10.74□□□□□ -0.69
CPNE1-201ENST00000317677 RFESDQ8TAC1 157 aa10.74□□□□□ -0.69
CPNE1-201ENST00000317677 SCGB1C1Q8TD33 95 aa10.74□□□□□ -0.69
CPNE1-201ENST00000317677 GAFA1Q96PS6 74 aa10.74□□□□□ -0.69
CPNE1-201ENST00000317677 PSMG3-AS1Q96PY0 264 aa10.74□□□□□ -0.69
CPNE1-201ENST00000317677 KCNIP1Q9NZI2 227 aa10.74□□□□□ -0.69
CPNE1-201ENST00000317677 UBE2J1Q9Y385 318 aaPredicted RBP10.74□□□□□ -0.69
CPNE1-201ENST00000317677 IGHV3-43A0A0B4J1X8 118 aa10.73□□□□□ -0.69
CPNE1-201ENST00000317677 A0A0G2JRQ6 117 aa10.73□□□□□ -0.69
CPNE1-201ENST00000317677 ODAMA1E959 279 aa10.73□□□□□ -0.69
CPNE1-201ENST00000317677 DIRC3C9JPN6 131 aa10.73□□□□□ -0.69
CPNE1-201ENST00000317677 MGST3O14880 152 aa10.73□□□□□ -0.69
CPNE1-201ENST00000317677 IGKV1-39P01597 117 aa10.73□□□□□ -0.69
CPNE1-201ENST00000317677 IGKV1D-39P04432 117 aa10.73□□□□□ -0.69
CPNE1-201ENST00000317677 WNT2P09544 360 aa10.73□□□□□ -0.69
CPNE1-201ENST00000317677 IGHV3-43DP0DP04 118 aa10.73□□□□□ -0.69
CPNE1-201ENST00000317677 LOXP28300 417 aaPredicted RBP10.73□□□□□ -0.69
CPNE1-201ENST00000317677 ADMP35318 185 aa10.73□□□□□ -0.69
CPNE1-201ENST00000317677 CLEC12BQ2HXU8 276 aa10.73□□□□□ -0.69
CPNE1-201ENST00000317677 CXorf66Q5JRM2 361 aaPredicted RBP10.73□□□□□ -0.69
CPNE1-201ENST00000317677 LDLRAD2Q5SZI1 272 aa10.73□□□□□ -0.69
CPNE1-201ENST00000317677 DEFB108BQ8NET1 73 aa10.73□□□□□ -0.69
CPNE1-201ENST00000317677 OR51H1Q8NH63 302 aa10.73□□□□□ -0.69
CPNE1-201ENST00000317677 GALMQ96C23 342 aa10.73□□□□□ -0.69
CPNE1-201ENST00000317677 ZNF586Q9NXT0 402 aa10.73□□□□□ -0.69
CPNE1-201ENST00000317677 PPP1R3CQ9UQK1 317 aa10.73□□□□□ -0.69
CPNE1-201ENST00000317677 IGLC7A0M8Q6 106 aa10.72□□□□□ -0.69
CPNE1-201ENST00000317677 FCN3O75636 299 aa10.72□□□□□ -0.69
CPNE1-201ENST00000317677 SERF1AO75920 110 aa10.72□□□□□ -0.69
CPNE1-201ENST00000317677 KRASP01116 189 aa10.72□□□□□ -0.69
CPNE1-201ENST00000317677 GPX1P07203 203 aa10.72□□□□□ -0.69
CPNE1-201ENST00000317677 FGF8P55075 233 aaPredicted RBP10.72□□□□□ -0.69
CPNE1-201ENST00000317677 TFF3Q07654 80 aa10.72□□□□□ -0.69
CPNE1-201ENST00000317677 EIF4EBP1Q13541 118 aaPredicted RBP10.72□□□□□ -0.69
CPNE1-201ENST00000317677 CR1LQ2VPA4 569 aa10.72□□□□□ -0.69
CPNE1-201ENST00000317677 NMSQ5H8A3 153 aa10.72□□□□□ -0.69
CPNE1-201ENST00000317677 UTF1Q5T230 341 aa10.72□□□□□ -0.69
CPNE1-201ENST00000317677 FAM78BQ5VT40 261 aa10.72□□□□□ -0.69
CPNE1-201ENST00000317677 TEX36Q5VZQ5 186 aa10.72□□□□□ -0.69
CPNE1-201ENST00000317677 TCF23Q7RTU1 214 aa10.72□□□□□ -0.69
CPNE1-201ENST00000317677 TMEM217Q8N7C4 229 aa10.72□□□□□ -0.69
CPNE1-201ENST00000317677 OR5D13Q8NGL4 314 aa10.72□□□□□ -0.69
CPNE1-201ENST00000317677 NGBQ9NPG2 151 aa10.72□□□□□ -0.69
CPNE1-201ENST00000317677 RBM7Q9Y580 266 aaKnown RBP10.72□□□□□ -0.69
CPNE1-201ENST00000317677 MAST4O15021 2626 aa10.72□□□□□ -0.69
CPNE1-201ENST00000317677 SAA2-SAA4A0A096LPE2 208 aa10.72□□□□□ -0.69
CPNE1-201ENST00000317677 TMPRSS2O15393 492 aa10.72□□□□□ -0.69
CPNE1-201ENST00000317677 CHST1O43916 411 aa10.72□□□□□ -0.69
CPNE1-201ENST00000317677 CGB3P0DN86 165 aa10.72□□□□□ -0.69
CPNE1-201ENST00000317677 CGB7P0DN87 165 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms