RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 HEPN1Q6WQI6 88 aa7.44□□□□□ -1.22
USF3-201ENST00000316407 ORMDL3Q8N138 153 aa7.44□□□□□ -1.22
USF3-201ENST00000316407 OR4X2Q8NGF9 303 aa7.44□□□□□ -1.22
USF3-201ENST00000316407 LILRA5A6NI73 299 aa7.44□□□□□ -1.22
USF3-201ENST00000316407 ATP5LO75964 103 aa7.44□□□□□ -1.22
USF3-201ENST00000316407 NGFRP08138 427 aa7.44□□□□□ -1.22
USF3-201ENST00000316407 FBXW9Q5XUX1 488 aa7.44□□□□□ -1.22
USF3-201ENST00000316407 DNM1P46Q6ZS02 220 aa7.44□□□□□ -1.22
USF3-201ENST00000316407 RAB1CQ92928 201 aa7.44□□□□□ -1.22
USF3-201ENST00000316407 SDF2L1Q9HCN8 221 aa7.44□□□□□ -1.22
USF3-201ENST00000316407 CD1AP06126 327 aa7.44□□□□□ -1.22
USF3-201ENST00000316407 CNTFRP26992 372 aa7.44□□□□□ -1.22
USF3-201ENST00000316407 SRSF8Q9BRL6 282 aaKnown RBP7.44□□□□□ -1.22
USF3-201ENST00000316407 IGKV1D-42A0A075B6H8 117 aa7.44□□□□□ -1.22
USF3-201ENST00000316407 EREGO14944 169 aa7.44□□□□□ -1.22
USF3-201ENST00000316407 RAMP3O60896 148 aa7.44□□□□□ -1.22
USF3-201ENST00000316407 PSG3Q16557 428 aa7.44□□□□□ -1.22
USF3-201ENST00000316407 FAM117AQ9C073 453 aa7.44□□□□□ -1.22
USF3-201ENST00000316407 ZNF815PA8K554 130 aa7.44□□□□□ -1.22
USF3-201ENST00000316407 ADRA2AP08913 450 aa7.44□□□□□ -1.22
USF3-201ENST00000316407 TMEM196Q5HYL7 178 aa7.44□□□□□ -1.22
USF3-201ENST00000316407 NPIPB3Q92617 1050 aa7.44□□□□□ -1.22
USF3-201ENST00000316407 LHX9Q9NQ69 397 aa7.44□□□□□ -1.22
USF3-201ENST00000316407 CEACAM4O75871 244 aa7.44□□□□□ -1.22
USF3-201ENST00000316407 KIR3DS1Q14943 382 aa7.44□□□□□ -1.22
USF3-201ENST00000316407 OR10J3Q5JRS4 329 aa7.44□□□□□ -1.22
USF3-201ENST00000316407 RTN4RL2Q86UN3 420 aa7.44□□□□□ -1.22
USF3-201ENST00000316407 IZUMO1RA6ND01 250 aa7.43□□□□□ -1.22
USF3-201ENST00000316407 UPK3AO75631 287 aa7.43□□□□□ -1.22
USF3-201ENST00000316407 THY1P04216 161 aa7.43□□□□□ -1.22
USF3-201ENST00000316407 TMEM52Q8NDY8 209 aa7.43□□□□□ -1.22
USF3-201ENST00000316407 RNF222A6NCQ9 220 aa7.43□□□□□ -1.22
USF3-201ENST00000316407 SELENOTP62341 195 aa7.43□□□□□ -1.22
USF3-201ENST00000316407 INO80CQ6PI98 192 aaPredicted RBP7.43□□□□□ -1.22
USF3-201ENST00000316407 TCF19Q9Y242 345 aa7.43□□□□□ -1.22
USF3-201ENST00000316407 PRR32B1ATL7 298 aa7.43□□□□□ -1.22
USF3-201ENST00000316407 KLK10O43240 276 aa7.43□□□□□ -1.22
USF3-201ENST00000316407 PYY3Q5JQD4 70 aa7.43□□□□□ -1.22
USF3-201ENST00000316407 ZNF784Q8NCA9 323 aaPredicted RBP7.43□□□□□ -1.22
USF3-201ENST00000316407 DPM2O94777 84 aa7.43□□□□□ -1.22
USF3-201ENST00000316407 LIMS1P48059 325 aa7.43□□□□□ -1.22
USF3-201ENST00000316407 RPL23P62829 140 aaKnown RBP7.43□□□□□ -1.22
USF3-201ENST00000316407 IL11RAQ14626 422 aa7.43□□□□□ -1.22
USF3-201ENST00000316407 FGF12P61328 243 aa7.43□□□□□ -1.22
USF3-201ENST00000316407 USF3Q68DE3 2245 aa7.43□□□□□ -1.22
USF3-201ENST00000316407 FMC1Q96HJ9 113 aa7.43□□□□□ -1.22
USF3-201ENST00000316407 FOXD3Q9UJU5 478 aaPredicted RBP7.43□□□□□ -1.22
USF3-201ENST00000316407 TCFL5Q9UL49 500 aa7.43□□□□□ -1.22
USF3-201ENST00000316407 LTBP3Q9NS15 1303 aa7.43□□□□□ -1.22
USF3-201ENST00000316407 IGFBP2P18065 325 aa7.43□□□□□ -1.22
USF3-201ENST00000316407 TSPOP30536 169 aa7.43□□□□□ -1.22
USF3-201ENST00000316407 FOXL1Q12952 345 aa7.43□□□□□ -1.22
USF3-201ENST00000316407 TRAV14DV4A0A0A6YYC5 116 aa7.43□□□□□ -1.22
USF3-201ENST00000316407 LRTM2Q8N967 370 aa7.43□□□□□ -1.22
USF3-201ENST00000316407 DEPPQ9NTK1 212 aa7.43□□□□□ -1.22
USF3-201ENST00000316407 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.43□□□□□ -1.22
USF3-201ENST00000316407 H3BRM9 83 aa7.43□□□□□ -1.22
USF3-201ENST00000316407 GATA2P23769 480 aaPredicted RBP7.43□□□□□ -1.22
USF3-201ENST00000316407 NR2C2APQ86WQ0 139 aa7.43□□□□□ -1.22
USF3-201ENST00000316407 C1RLQ9NZP8 487 aa7.43□□□□□ -1.22
USF3-201ENST00000316407 C9orf153Q5TBE3 101 aa7.43□□□□□ -1.22
USF3-201ENST00000316407 CALYQ9NYX4 217 aa7.43□□□□□ -1.22
USF3-201ENST00000316407 WNT9BO14905 357 aa7.42□□□□□ -1.22
USF3-201ENST00000316407 MKRN2OSH3BPM6 223 aa7.42□□□□□ -1.22
USF3-201ENST00000316407 PRB1P04280 392 aa7.42□□□□□ -1.22
USF3-201ENST00000316407 LIFP15018 202 aa7.42□□□□□ -1.22
USF3-201ENST00000316407 UBE2V1Q13404 147 aa7.42□□□□□ -1.22
USF3-201ENST00000316407 GUSBP1Q15486 140 aa7.42□□□□□ -1.22
USF3-201ENST00000316407 FAM89BQ8N5H3 189 aa7.42□□□□□ -1.22
USF3-201ENST00000316407 RAX2Q96IS3 184 aa7.42□□□□□ -1.22
USF3-201ENST00000316407 PF4V1P10720 104 aa7.42□□□□□ -1.22
USF3-201ENST00000316407 IL6RP08887 468 aaPredicted RBP7.42□□□□□ -1.22
USF3-201ENST00000316407 GPX4P36969 197 aaPredicted RBP7.42□□□□□ -1.22
USF3-201ENST00000316407 GAGE2AQ6NT46 116 aa7.42□□□□□ -1.22
USF3-201ENST00000316407 PIMREGQ9BSJ6 248 aa7.42□□□□□ -1.22
USF3-201ENST00000316407 NPSP0C0P6 89 aa7.42□□□□□ -1.22
USF3-201ENST00000316407 CDKN1AP38936 164 aa7.42□□□□□ -1.22
USF3-201ENST00000316407 HSPE1P61604 102 aaKnown RBP7.42□□□□□ -1.22
USF3-201ENST00000316407 CYP2G1PQ6ZSU1 146 aa7.42□□□□□ -1.22
USF3-201ENST00000316407 ZNF576Q9H609 170 aa7.42□□□□□ -1.22
USF3-201ENST00000316407 A0A1W2PRE2 83 aa7.42□□□□□ -1.22
USF3-201ENST00000316407 PHLDA1Q8WV24 401 aaPredicted RBP7.42□□□□□ -1.22
USF3-201ENST00000316407 LHFPL6Q9Y693 200 aa7.42□□□□□ -1.22
USF3-201ENST00000316407 MCRIP2Q9BUT9 160 aaKnown RBP7.42□□□□□ -1.22
USF3-201ENST00000316407 A0A087WV48 116 aa7.42□□□□□ -1.22
USF3-201ENST00000316407 CD55P08174 381 aa7.42□□□□□ -1.22
USF3-201ENST00000316407 ST20Q9HBF5 79 aa7.42□□□□□ -1.22
USF3-201ENST00000316407 SLC25A15Q9Y619 301 aa7.42□□□□□ -1.22
USF3-201ENST00000316407 A0A0G2JMM0 328 aa7.42□□□□□ -1.22
USF3-201ENST00000316407 A0A1W2PPB8 328 aa7.42□□□□□ -1.22
USF3-201ENST00000316407 KIR3DP1A8MWS1 328 aa7.42□□□□□ -1.22
USF3-201ENST00000316407 LDLRAD1Q5T700 205 aa7.42□□□□□ -1.22
USF3-201ENST00000316407 GLMPQ8WWB7 406 aa7.42□□□□□ -1.22
USF3-201ENST00000316407 TNFRSF18Q9Y5U5 241 aa7.42□□□□□ -1.22
USF3-201ENST00000316407 MALRD1Q5VYJ5 2156 aa7.42□□□□□ -1.22
USF3-201ENST00000316407 GGTLC3B5MD39 225 aa7.42□□□□□ -1.22
USF3-201ENST00000316407 CA7P43166 264 aa7.42□□□□□ -1.22
USF3-201ENST00000316407 S100A7L2Q5SY68 101 aa7.42□□□□□ -1.22
USF3-201ENST00000316407 Q96M66 194 aa7.42□□□□□ -1.22
USF3-201ENST00000316407 PLNP26678 52 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms