RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 DEFB108AA8MXU0 73 aa14.13□□□□□ -0.15
SCAMP4-201ENST00000316097 MPDU1O75352 247 aa14.13□□□□□ -0.15
SCAMP4-201ENST00000316097 PMCHP20382 165 aa14.13□□□□□ -0.15
SCAMP4-201ENST00000316097 AMTP48728 403 aa14.13□□□□□ -0.15
SCAMP4-201ENST00000316097 HTD2P86397 168 aa14.13□□□□□ -0.15
SCAMP4-201ENST00000316097 ST6GALNAC3Q8NDV1 305 aa14.13□□□□□ -0.15
SCAMP4-201ENST00000316097 OR2Z1Q8NG97 314 aa14.13□□□□□ -0.15
SCAMP4-201ENST00000316097 COL6A6A6NMZ7 2263 aa14.13□□□□□ -0.15
SCAMP4-201ENST00000316097 GABRA2P47869 451 aa14.13□□□□□ -0.15
SCAMP4-201ENST00000316097 UCNP55089 124 aa14.13□□□□□ -0.15
SCAMP4-201ENST00000316097 KIAA1644Q3SXP7 199 aa14.13□□□□□ -0.15
SCAMP4-201ENST00000316097 SPATA31B1PQ5VZV4 182 aa14.13□□□□□ -0.15
SCAMP4-201ENST00000316097 C1orf174Q8IYL3 243 aa14.13□□□□□ -0.15
SCAMP4-201ENST00000316097 NRN1Q9NPD7 142 aa14.13□□□□□ -0.15
SCAMP4-201ENST00000316097 HEYLQ9NQ87 328 aaPredicted RBP14.13□□□□□ -0.15
SCAMP4-201ENST00000316097 NAT8BQ9UHF3 227 aa14.13□□□□□ -0.15
SCAMP4-201ENST00000316097 OOEPA6NGQ2 149 aa14.12□□□□□ -0.15
SCAMP4-201ENST00000316097 GCHFRP30047 84 aa14.12□□□□□ -0.15
SCAMP4-201ENST00000316097 CTRLP40313 264 aa14.12□□□□□ -0.15
SCAMP4-201ENST00000316097 LY6DQ14210 128 aa14.12□□□□□ -0.15
SCAMP4-201ENST00000316097 WFDC8Q8IUA0 241 aa14.12□□□□□ -0.15
SCAMP4-201ENST00000316097 TPRX1Q8N7U7 411 aa14.12□□□□□ -0.15
SCAMP4-201ENST00000316097 STPG4Q8N801 248 aa14.12□□□□□ -0.15
SCAMP4-201ENST00000316097 EAF1Q96JC9 268 aaPredicted RBP14.12□□□□□ -0.15
SCAMP4-201ENST00000316097 PSG11Q9UQ72 335 aa14.12□□□□□ -0.15
SCAMP4-201ENST00000316097 SSTR5P35346 364 aa14.12□□□□□ -0.15
SCAMP4-201ENST00000316097 RFESDQ8TAC1 157 aa14.12□□□□□ -0.15
SCAMP4-201ENST00000316097 TXN2Q99757 166 aa14.12□□□□□ -0.15
SCAMP4-201ENST00000316097 SLC45A2Q9UMX9 530 aa14.12□□□□□ -0.15
SCAMP4-201ENST00000316097 RCHY1Q96PM5 261 aa14.11□□□□□ -0.15
SCAMP4-201ENST00000316097 SEPSECSQ9HD40 501 aaKnown RBP14.11□□□□□ -0.15
SCAMP4-201ENST00000316097 V9GYV3 84 aa14.11□□□□□ -0.15
SCAMP4-201ENST00000316097 SLC35B1P78383 322 aa14.11□□□□□ -0.15
SCAMP4-201ENST00000316097 PRAMEF5Q5TYX0 476 aa14.11□□□□□ -0.15
SCAMP4-201ENST00000316097 MBNL2Q5VZF2 373 aaKnown RBP14.11□□□□□ -0.15
SCAMP4-201ENST00000316097 TCTEX1D1Q8N7M0 179 aa14.11□□□□□ -0.15
SCAMP4-201ENST00000316097 UHRF2Q96PU4 802 aa14.11□□□□□ -0.15
SCAMP4-201ENST00000316097 GNB1LQ9BYB4 327 aa14.11□□□□□ -0.15
SCAMP4-201ENST00000316097 PLCE1Q9P212 2302 aa14.11□□□□□ -0.15
SCAMP4-201ENST00000316097 C16orf97H3BN30 126 aa14.1□□□□□ -0.15
SCAMP4-201ENST00000316097 FOXH1O75593 365 aa14.1□□□□□ -0.15
SCAMP4-201ENST00000316097 LTC4SQ16873 150 aa14.1□□□□□ -0.15
SCAMP4-201ENST00000316097 Q6ZN92 141 aa14.1□□□□□ -0.15
SCAMP4-201ENST00000316097 COQ2Q96H96 371 aa14.1□□□□□ -0.15
SCAMP4-201ENST00000316097 UQCR10Q9UDW1 63 aa14.1□□□□□ -0.15
SCAMP4-201ENST00000316097 POLEQ07864 2286 aa14.1□□□□□ -0.15
SCAMP4-201ENST00000316097 TRAV34A0A0B4J273 112 aa14.1□□□□□ -0.15
SCAMP4-201ENST00000316097 SPRY3O43610 288 aa14.1□□□□□ -0.15
SCAMP4-201ENST00000316097 FCGR3BO75015 233 aa14.1□□□□□ -0.15
SCAMP4-201ENST00000316097 NDUFB8O95169 186 aa14.1□□□□□ -0.15
SCAMP4-201ENST00000316097 OR5G3P0C626 314 aa14.1□□□□□ -0.15
SCAMP4-201ENST00000316097 HNRNPA3P51991 378 aaKnown RBP14.1□□□□□ -0.15
SCAMP4-201ENST00000316097 RPP30P78346 268 aaKnown RBP14.1□□□□□ -0.15
SCAMP4-201ENST00000316097 ABHD12Q8N2K0 398 aa14.1□□□□□ -0.15
SCAMP4-201ENST00000316097 PLPPR2Q96GM1 343 aa14.1□□□□□ -0.15
SCAMP4-201ENST00000316097 HSD17B10Q99714 261 aaKnown RBP14.1□□□□□ -0.15
SCAMP4-201ENST00000316097 FAM234AQ9H0X4 552 aa14.1□□□□□ -0.15
SCAMP4-201ENST00000316097 TRBV9A0A0B4J1U6 114 aa14.09□□□□□ -0.15
SCAMP4-201ENST00000316097 C9JCJ5 164 aa14.09□□□□□ -0.15
SCAMP4-201ENST00000316097 ZNF253O75346 499 aa14.09□□□□□ -0.15
SCAMP4-201ENST00000316097 HYPMO75409 117 aa14.09□□□□□ -0.15
SCAMP4-201ENST00000316097 CD40P25942 277 aa14.09□□□□□ -0.15
SCAMP4-201ENST00000316097 SLC35E4Q6ICL7 350 aa14.09□□□□□ -0.15
SCAMP4-201ENST00000316097 WDR82Q6UXN9 313 aa14.09□□□□□ -0.15
SCAMP4-201ENST00000316097 VKORC1L1Q8N0U8 176 aa14.09□□□□□ -0.15
SCAMP4-201ENST00000316097 FAM169BQ8N8A8 192 aa14.09□□□□□ -0.15
SCAMP4-201ENST00000316097 OR4A16Q8NH70 328 aa14.09□□□□□ -0.15
SCAMP4-201ENST00000316097 KCNS1Q96KK3 526 aa14.09□□□□□ -0.15
SCAMP4-201ENST00000316097 CXXC4Q9H2H0 198 aa14.09□□□□□ -0.15
SCAMP4-201ENST00000316097 TRGV10A0A0A0MS01 117 aa14.09□□□□□ -0.15
SCAMP4-201ENST00000316097 A0A1W2PS18 150 aa14.09□□□□□ -0.15
SCAMP4-201ENST00000316097 IGLC2P0DOY2 106 aa14.09□□□□□ -0.15
SCAMP4-201ENST00000316097 IGLC3P0DOY3 106 aa14.09□□□□□ -0.15
SCAMP4-201ENST00000316097 EFNB3Q15768 340 aa14.09□□□□□ -0.15
SCAMP4-201ENST00000316097 TUBG2Q9NRH3 451 aa14.09□□□□□ -0.15
SCAMP4-201ENST00000316097 THBDP07204 575 aa14.08□□□□□ -0.15
SCAMP4-201ENST00000316097 TCL1AP56279 114 aa14.08□□□□□ -0.15
SCAMP4-201ENST00000316097 OR4P4Q8NGL7 312 aa14.08□□□□□ -0.15
SCAMP4-201ENST00000316097 RND1Q92730 232 aa14.08□□□□□ -0.15
SCAMP4-201ENST00000316097 C11orf52Q96A22 123 aa14.08□□□□□ -0.15
SCAMP4-201ENST00000316097 WNT10AQ9GZT5 417 aa14.08□□□□□ -0.15
SCAMP4-201ENST00000316097 LAMTOR2Q9Y2Q5 125 aa14.08□□□□□ -0.15
SCAMP4-201ENST00000316097 C20orf202A1L168 122 aa14.08□□□□□ -0.16
SCAMP4-201ENST00000316097 PRSS46E5RG02 174 aa14.08□□□□□ -0.16
SCAMP4-201ENST00000316097 GNG10P50151 68 aa14.08□□□□□ -0.16
SCAMP4-201ENST00000316097 FXYD3Q14802 87 aa14.08□□□□□ -0.16
SCAMP4-201ENST00000316097 CENPWQ5EE01 88 aa14.08□□□□□ -0.16
SCAMP4-201ENST00000316097 ZCCHC24Q8N2G6 241 aaKnown RBP14.08□□□□□ -0.16
SCAMP4-201ENST00000316097 OR13A1Q8NGR1 328 aa14.08□□□□□ -0.16
SCAMP4-201ENST00000316097 RNASE7Q9H1E1 156 aaKnown RBP14.08□□□□□ -0.16
SCAMP4-201ENST00000316097 METRNQ9UJH8 293 aa14.08□□□□□ -0.16
SCAMP4-201ENST00000316097 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.08□□□□□ -0.16
SCAMP4-201ENST00000316097 RHOBP62745 196 aa14.08□□□□□ -0.16
SCAMP4-201ENST00000316097 RBPJQ06330 500 aa14.08□□□□□ -0.16
SCAMP4-201ENST00000316097 C1orf159Q96HA4 380 aa14.08□□□□□ -0.16
SCAMP4-201ENST00000316097 DPRXA6NFQ7 191 aa14.07□□□□□ -0.16
SCAMP4-201ENST00000316097 MT-CO2P00403 227 aa14.07□□□□□ -0.16
SCAMP4-201ENST00000316097 SRIP30626 198 aa14.07□□□□□ -0.16
SCAMP4-201ENST00000316097 GLRXP35754 106 aa14.07□□□□□ -0.16
SCAMP4-201ENST00000316097 VDAC2P45880 294 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms