RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 TMEM70Q9BUB7 260 aa14.93□□□□□ -0.02
SPSB4-201ENST00000310546 SSBP4Q9BWG4 385 aaPredicted RBP14.93□□□□□ -0.02
SPSB4-201ENST00000310546 ZNF716A6NP11 495 aa14.93□□□□□ -0.02
SPSB4-201ENST00000310546 PSG5Q15238 335 aa14.93□□□□□ -0.02
SPSB4-201ENST00000310546 SLC25A34Q6PIV7 304 aa14.93□□□□□ -0.02
SPSB4-201ENST00000310546 FAM168AQ92567 244 aa14.93□□□□□ -0.02
SPSB4-201ENST00000310546 PRRG4Q9BZD6 226 aa14.93□□□□□ -0.02
SPSB4-201ENST00000310546 OSTCQ9NRP0 149 aa14.93□□□□□ -0.02
SPSB4-201ENST00000310546 TNFRSF19Q9NS68 423 aa14.93□□□□□ -0.02
SPSB4-201ENST00000310546 MFAP2P55001 183 aa14.92□□□□□ -0.02
SPSB4-201ENST00000310546 FAM71F2Q6NXP2 309 aa14.92□□□□□ -0.02
SPSB4-201ENST00000310546 Q6P435 159 aa14.92□□□□□ -0.02
SPSB4-201ENST00000310546 ABHD12Q8N2K0 398 aa14.92□□□□□ -0.02
SPSB4-201ENST00000310546 OR10J4P0C629 311 aa14.92□□□□□ -0.02
SPSB4-201ENST00000310546 C12orf54Q6X4T0 127 aa14.92□□□□□ -0.02
SPSB4-201ENST00000310546 NINJ1Q92982 152 aa14.92□□□□□ -0.02
SPSB4-201ENST00000310546 A0A087X0K7 114 aa14.91□□□□□ -0.02
SPSB4-201ENST00000310546 PCOLCEQ15113 449 aa14.91□□□□□ -0.02
SPSB4-201ENST00000310546 ATP1A1-AS1Q5TC04 95 aa14.91□□□□□ -0.02
SPSB4-201ENST00000310546 STPG3Q8N7X2 389 aa14.91□□□□□ -0.02
SPSB4-201ENST00000310546 WDR54Q9H977 334 aa14.91□□□□□ -0.02
SPSB4-201ENST00000310546 DOCK10Q96BY6 2186 aa14.91□□□□□ -0.02
SPSB4-201ENST00000310546 SPAARA0A1B0GVQ0 90 aa14.91□□□□□ -0.02
SPSB4-201ENST00000310546 ANKRD30BLA7E2S9 258 aa14.91□□□□□ -0.02
SPSB4-201ENST00000310546 CAMPP49913 170 aa14.91□□□□□ -0.02
SPSB4-201ENST00000310546 GNG3P63215 75 aa14.91□□□□□ -0.02
SPSB4-201ENST00000310546 GALMQ96C23 342 aa14.91□□□□□ -0.02
SPSB4-201ENST00000310546 ACACAQ13085 2346 aa14.91□□□□□ -0.02
SPSB4-201ENST00000310546 SMIM27A0A1W2PRY6 76 aa14.9□□□□□ -0.02
SPSB4-201ENST00000310546 LINC00473A8K010 186 aa14.9□□□□□ -0.02
SPSB4-201ENST00000310546 H0Y8G0 127 aa14.9□□□□□ -0.02
SPSB4-201ENST00000310546 OR9G9P0C7N8 305 aa14.9□□□□□ -0.02
SPSB4-201ENST00000310546 MCRIP2Q9BUT9 160 aaKnown RBP14.9□□□□□ -0.02
SPSB4-201ENST00000310546 ST20Q9HBF5 79 aa14.9□□□□□ -0.02
SPSB4-201ENST00000310546 CDIPTO14735 213 aa14.9□□□□□ -0.02
SPSB4-201ENST00000310546 NBEAP1P0C6P0 100 aa14.9□□□□□ -0.02
SPSB4-201ENST00000310546 FOLR3P41439 243 aa14.9□□□□□ -0.02
SPSB4-201ENST00000310546 GABRA6Q16445 453 aa14.9□□□□□ -0.02
SPSB4-201ENST00000310546 MIR17HGQ75NE6 70 aa14.9□□□□□ -0.02
SPSB4-201ENST00000310546 SAP30LQ9HAJ7 183 aa14.9□□□□□ -0.02
SPSB4-201ENST00000310546 KCNIP1Q9NZI2 227 aa14.9□□□□□ -0.02
SPSB4-201ENST00000310546 IGHV1-45A0A0A0MS14 117 aa14.89□□□□□ -0.03
SPSB4-201ENST00000310546 IZUMO1RA6ND01 250 aa14.89□□□□□ -0.03
SPSB4-201ENST00000310546 C9orf172C9J069 976 aa14.89□□□□□ -0.03
SPSB4-201ENST00000310546 ISLRO14498 428 aa14.89□□□□□ -0.03
SPSB4-201ENST00000310546 ACP1P24666 158 aa14.89□□□□□ -0.03
SPSB4-201ENST00000310546 CEBPDP49716 269 aaPredicted RBP14.89□□□□□ -0.03
SPSB4-201ENST00000310546 LHFPL4Q7Z7J7 247 aa14.89□□□□□ -0.03
SPSB4-201ENST00000310546 VKORC1L1Q8N0U8 176 aa14.89□□□□□ -0.03
SPSB4-201ENST00000310546 PROK2Q9HC23 129 aa14.89□□□□□ -0.03
SPSB4-201ENST00000310546 GAGE10A6NGK3 116 aa14.89□□□□□ -0.03
SPSB4-201ENST00000310546 DEFB124Q8NES8 71 aa14.89□□□□□ -0.03
SPSB4-201ENST00000310546 CT55Q8WUE5 264 aa14.89□□□□□ -0.03
SPSB4-201ENST00000310546 ZNF355PQ9NSJ1 428 aa14.89□□□□□ -0.03
SPSB4-201ENST00000310546 GJE1A6NN92 205 aa14.89□□□□□ -0.03
SPSB4-201ENST00000310546 DEFB108AA8MXU0 73 aa14.89□□□□□ -0.03
SPSB4-201ENST00000310546 COX6A1P12074 109 aa14.89□□□□□ -0.03
SPSB4-201ENST00000310546 PLA2G2CQ5R387 149 aa14.89□□□□□ -0.03
SPSB4-201ENST00000310546 LINC00173Q6ZV60 143 aa14.89□□□□□ -0.03
SPSB4-201ENST00000310546 PEF1Q9UBV8 284 aaKnown RBP14.89□□□□□ -0.03
SPSB4-201ENST00000310546 A0A0G2JMM0 328 aa14.88□□□□□ -0.03
SPSB4-201ENST00000310546 A0A1W2PPB8 328 aa14.88□□□□□ -0.03
SPSB4-201ENST00000310546 KIR3DP1A8MWS1 328 aa14.88□□□□□ -0.03
SPSB4-201ENST00000310546 AHRRA9YTQ3 701 aa14.88□□□□□ -0.03
SPSB4-201ENST00000310546 GOSR1O95249 250 aa14.88□□□□□ -0.03
SPSB4-201ENST00000310546 HES3Q5TGS1 186 aa14.88□□□□□ -0.03
SPSB4-201ENST00000310546 GDF5OSQ5U4N7 250 aa14.88□□□□□ -0.03
SPSB4-201ENST00000310546 POM121L2Q96KW2 1035 aa14.88□□□□□ -0.03
SPSB4-201ENST00000310546 CHRDL1Q9BU40 450 aa14.88□□□□□ -0.03
SPSB4-201ENST00000310546 FAM234AQ9H0X4 552 aa14.88□□□□□ -0.03
SPSB4-201ENST00000310546 LOC102723996A0A087X1L8 192 aa14.88□□□□□ -0.03
SPSB4-201ENST00000310546 IGHV3-43A0A0B4J1X8 118 aa14.88□□□□□ -0.03
SPSB4-201ENST00000310546 IGHV3-43DP0DP04 118 aa14.88□□□□□ -0.03
SPSB4-201ENST00000310546 SMIM21Q3B7S5 101 aa14.88□□□□□ -0.03
SPSB4-201ENST00000310546 OR10D3Q8NH80 312 aa14.88□□□□□ -0.03
SPSB4-201ENST00000310546 FNDC4Q9H6D8 234 aaPredicted RBP14.88□□□□□ -0.03
SPSB4-201ENST00000310546 MBNL3Q9NUK0 354 aaKnown RBP14.88□□□□□ -0.03
SPSB4-201ENST00000310546 APC2O95996 2303 aa14.87□□□□□ -0.03
SPSB4-201ENST00000310546 ZNF503-AS2A6NEH8 195 aa14.87□□□□□ -0.03
SPSB4-201ENST00000310546 SNAI2O43623 268 aa14.87□□□□□ -0.03
SPSB4-201ENST00000310546 OR7C2O60412 319 aa14.87□□□□□ -0.03
SPSB4-201ENST00000310546 AREGP15514 252 aa14.87□□□□□ -0.03
SPSB4-201ENST00000310546 Q0VFX4 171 aa14.87□□□□□ -0.03
SPSB4-201ENST00000310546 FER1L6-AS1Q8NA97 138 aa14.87□□□□□ -0.03
SPSB4-201ENST00000310546 ZBTB34Q8NCN2 500 aa14.87□□□□□ -0.03
SPSB4-201ENST00000310546 PLPPR2Q96GM1 343 aa14.87□□□□□ -0.03
SPSB4-201ENST00000310546 PLEKHA3Q9HB20 300 aa14.87□□□□□ -0.03
SPSB4-201ENST00000310546 NPVFQ9HCQ7 196 aa14.87□□□□□ -0.03
SPSB4-201ENST00000310546 C7orf71A4D174 169 aa14.87□□□□□ -0.03
SPSB4-201ENST00000310546 C12orf77C9JDV5 145 aa14.87□□□□□ -0.03
SPSB4-201ENST00000310546 DLL1O00548 723 aa14.87□□□□□ -0.03
SPSB4-201ENST00000310546 CD5LO43866 347 aa14.87□□□□□ -0.03
SPSB4-201ENST00000310546 IGLC1P0CG04 106 aa14.87□□□□□ -0.03
SPSB4-201ENST00000310546 SRSF6Q13247 344 aaKnown RBP14.87□□□□□ -0.03
SPSB4-201ENST00000310546 PRAMEF5Q5TYX0 476 aa14.87□□□□□ -0.03
SPSB4-201ENST00000310546 PRAMEF6Q5VXH4 476 aa14.87□□□□□ -0.03
SPSB4-201ENST00000310546 PPIAL4DF5H284 164 aa14.86□□□□□ -0.03
SPSB4-201ENST00000310546 FOXG1P55316 489 aaPredicted RBP14.86□□□□□ -0.03
SPSB4-201ENST00000310546 OR1B1Q8NGR6 318 aa14.86□□□□□ -0.03
SPSB4-201ENST00000310546 OR4A16Q8NH70 328 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms