RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 C1orf159Q96HA4 380 aa18.08■□□□□ 0.49
PDLIM2-202ENST00000308354 CCL19Q99731 98 aa18.08■□□□□ 0.49
PDLIM2-202ENST00000308354 ZNF430Q9H8G1 570 aaPredicted RBP18.08■□□□□ 0.49
PDLIM2-202ENST00000308354 HILPDAQ9Y5L2 63 aa18.08■□□□□ 0.49
PDLIM2-202ENST00000308354 PLXNB1O43157 2135 aa18.08■□□□□ 0.49
PDLIM2-202ENST00000308354 PMS2P11Q13670 270 aa18.08■□□□□ 0.48
PDLIM2-202ENST00000308354 RBMS3Q6XE24 437 aaKnown RBP18.08■□□□□ 0.48
PDLIM2-202ENST00000308354 LHFPL4Q7Z7J7 247 aa18.08■□□□□ 0.48
PDLIM2-202ENST00000308354 IQCF2Q8IXL9 164 aa18.08■□□□□ 0.48
PDLIM2-202ENST00000308354 TMEM167AQ8TBQ9 72 aa18.08■□□□□ 0.48
PDLIM2-202ENST00000308354 GATAD1Q8WUU5 269 aa18.08■□□□□ 0.48
PDLIM2-202ENST00000308354 TVP23CQ96ET8 276 aa18.08■□□□□ 0.48
PDLIM2-202ENST00000308354 P2RX4Q99571 388 aa18.08■□□□□ 0.48
PDLIM2-202ENST00000308354 FKBP11Q9NYL4 201 aa18.08■□□□□ 0.48
PDLIM2-202ENST00000308354 PRELID1Q9Y255 219 aa18.08■□□□□ 0.48
PDLIM2-202ENST00000308354 LRRK2Q5S007 2527 aa18.08■□□□□ 0.48
PDLIM2-202ENST00000308354 LY6LH3BQJ8 138 aa18.07■□□□□ 0.48
PDLIM2-202ENST00000308354 M0R1W7 72 aa18.07■□□□□ 0.48
PDLIM2-202ENST00000308354 CYB5BO43169 146 aa18.07■□□□□ 0.48
PDLIM2-202ENST00000308354 USF1P22415 310 aaPredicted RBP18.07■□□□□ 0.48
PDLIM2-202ENST00000308354 TAGLN2P37802 199 aaKnown RBP18.07■□□□□ 0.48
PDLIM2-202ENST00000308354 CDC34P49427 236 aaPredicted RBP18.07■□□□□ 0.48
PDLIM2-202ENST00000308354 HCP5Q6MZN7 132 aa18.07■□□□□ 0.48
PDLIM2-202ENST00000308354 OR5B3Q8NH48 314 aa18.07■□□□□ 0.48
PDLIM2-202ENST00000308354 GGTLC1Q9BX51 225 aa18.07■□□□□ 0.48
PDLIM2-202ENST00000308354 AMMECR1Q9Y4X0 333 aaPredicted RBP18.07■□□□□ 0.48
PDLIM2-202ENST00000308354 YIF1AO95070 293 aa18.07■□□□□ 0.48
PDLIM2-202ENST00000308354 PRTN3P24158 256 aa18.07■□□□□ 0.48
PDLIM2-202ENST00000308354 CD81P60033 236 aa18.07■□□□□ 0.48
PDLIM2-202ENST00000308354 MEF2BQ02080 365 aaPredicted RBP18.07■□□□□ 0.48
PDLIM2-202ENST00000308354 SRSF1Q07955 248 aaKnown RBP eCLIP18.07■□□□□ 0.48
PDLIM2-202ENST00000308354 VSTM2AQ8TAG5 236 aa18.07■□□□□ 0.48
PDLIM2-202ENST00000308354 NAV3Q8IVL0 2385 aa18.07■□□□□ 0.48
PDLIM2-202ENST00000308354 UBR5O95071 2799 aaPredicted RBP18.06■□□□□ 0.48
PDLIM2-202ENST00000308354 OPRK1P41145 380 aa18.06■□□□□ 0.48
PDLIM2-202ENST00000308354 VMA21Q3ZAQ7 101 aa18.06■□□□□ 0.48
PDLIM2-202ENST00000308354 MIC13Q5XKP0 118 aa18.06■□□□□ 0.48
PDLIM2-202ENST00000308354 VMO1Q7Z5L0 202 aa18.06■□□□□ 0.48
PDLIM2-202ENST00000308354 SLC35E3Q7Z769 313 aa18.06■□□□□ 0.48
PDLIM2-202ENST00000308354 FAM24BQ8N5W8 94 aa18.06■□□□□ 0.48
PDLIM2-202ENST00000308354 OR11H6Q8NGC7 330 aa18.06■□□□□ 0.48
PDLIM2-202ENST00000308354 LSM4Q9Y4Z0 139 aaKnown RBP18.06■□□□□ 0.48
PDLIM2-202ENST00000308354 MAP1AP78559 2803 aaPredicted RBP18.06■□□□□ 0.48
PDLIM2-202ENST00000308354 ZNF727A8MUV8 499 aa18.06■□□□□ 0.48
PDLIM2-202ENST00000308354 MT-ND4LP03901 98 aa18.06■□□□□ 0.48
PDLIM2-202ENST00000308354 HTR1DP28221 377 aa18.06■□□□□ 0.48
PDLIM2-202ENST00000308354 ZFP82Q8N141 532 aa18.06■□□□□ 0.48
PDLIM2-202ENST00000308354 NPVFQ9HCQ7 196 aa18.06■□□□□ 0.48
PDLIM2-202ENST00000308354 NDUFA4L2Q9NRX3 87 aa18.06■□□□□ 0.48
PDLIM2-202ENST00000308354 PXMP4Q9Y6I8 212 aa18.06■□□□□ 0.48
PDLIM2-202ENST00000308354 A0A1W2PPI3 338 aa18.05■□□□□ 0.48
PDLIM2-202ENST00000308354 OR2C1O95371 312 aa18.05■□□□□ 0.48
PDLIM2-202ENST00000308354 LMO4P61968 165 aa18.05■□□□□ 0.48
PDLIM2-202ENST00000308354 SSMEM1Q8WWF3 244 aa18.05■□□□□ 0.48
PDLIM2-202ENST00000308354 LPAR2Q9HBW0 351 aa18.05■□□□□ 0.48
PDLIM2-202ENST00000308354 A1L4Q6 167 aa18.04■□□□□ 0.48
PDLIM2-202ENST00000308354 CGB1A6NKQ9 187 aa18.04■□□□□ 0.48
PDLIM2-202ENST00000308354 SEC14L6B5MCN3 397 aa18.04■□□□□ 0.48
PDLIM2-202ENST00000308354 LGALS7P47929 136 aa18.04■□□□□ 0.48
PDLIM2-202ENST00000308354 PSMB3P49720 205 aa18.04■□□□□ 0.48
PDLIM2-202ENST00000308354 MRGPRG-AS1Q2M3A8 158 aa18.04■□□□□ 0.48
PDLIM2-202ENST00000308354 TPTE2P1Q5T6R2 138 aa18.04■□□□□ 0.48
PDLIM2-202ENST00000308354 OR1L8Q8NGR8 309 aa18.04■□□□□ 0.48
PDLIM2-202ENST00000308354 NRGNQ92686 78 aa18.04■□□□□ 0.48
PDLIM2-202ENST00000308354 KLF2Q9Y5W3 355 aaPredicted RBP18.04■□□□□ 0.48
PDLIM2-202ENST00000308354 TIMM23O14925 209 aa18.04■□□□□ 0.48
PDLIM2-202ENST00000308354 FOLR2P14207 255 aa18.04■□□□□ 0.48
PDLIM2-202ENST00000308354 CD24P25063 80 aa18.04■□□□□ 0.48
PDLIM2-202ENST00000308354 C2CD4CQ8TF44 421 aa18.04■□□□□ 0.48
PDLIM2-202ENST00000308354 DPM3Q9P2X0 92 aa18.04■□□□□ 0.48
PDLIM2-202ENST00000308354 TEPPQ6URK8 271 aa18.03■□□□□ 0.48
PDLIM2-202ENST00000308354 OR4A5Q8NH83 315 aa18.03■□□□□ 0.48
PDLIM2-202ENST00000308354 SPOCK3Q9BQ16 436 aa18.03■□□□□ 0.48
PDLIM2-202ENST00000308354 CSMD2Q7Z408 3487 aa18.03■□□□□ 0.48
PDLIM2-202ENST00000308354 PAX2Q02962 417 aa18.03■□□□□ 0.48
PDLIM2-202ENST00000308354 MANBALQ9NQG1 85 aa18.03■□□□□ 0.48
PDLIM2-202ENST00000308354 CSMD1Q96PZ7 3565 aa18.02■□□□□ 0.48
PDLIM2-202ENST00000308354 WT1-ASQ06250 92 aa18.02■□□□□ 0.48
PDLIM2-202ENST00000308354 PSG5Q15238 335 aa18.02■□□□□ 0.48
PDLIM2-202ENST00000308354 MLANAQ16655 118 aa18.02■□□□□ 0.48
PDLIM2-202ENST00000308354 A0A087WWC5 75 aa18.02■□□□□ 0.47
PDLIM2-202ENST00000308354 A0A1W2PPV4 95 aa18.02■□□□□ 0.47
PDLIM2-202ENST00000308354 ODF3BA8MYP8 253 aa18.02■□□□□ 0.47
PDLIM2-202ENST00000308354 SOX15O60248 233 aa18.02■□□□□ 0.47
PDLIM2-202ENST00000308354 PAGE4O60829 102 aa18.02■□□□□ 0.47
PDLIM2-202ENST00000308354 APELAP0DMC3 54 aa18.02■□□□□ 0.47
PDLIM2-202ENST00000308354 PDLIM4P50479 330 aa18.02■□□□□ 0.47
PDLIM2-202ENST00000308354 YPEL4Q96NS1 127 aa18.02■□□□□ 0.47
PDLIM2-202ENST00000308354 SAV1Q9H4B6 383 aaPredicted RBP18.02■□□□□ 0.47
PDLIM2-202ENST00000308354 RNASE2P10153 161 aaKnown RBP18.01■□□□□ 0.47
PDLIM2-202ENST00000308354 RAB5AP20339 215 aa18.01■□□□□ 0.47
PDLIM2-202ENST00000308354 HABP2Q14520 560 aaPredicted RBP18.01■□□□□ 0.47
PDLIM2-202ENST00000308354 SSX2Q16385 188 aa18.01■□□□□ 0.47
PDLIM2-202ENST00000308354 OR4F5Q8NH21 305 aa18.01■□□□□ 0.47
PDLIM2-202ENST00000308354 OR4F4Q96R69 305 aa18.01■□□□□ 0.47
PDLIM2-202ENST00000308354 REG1AP05451 166 aa18■□□□□ 0.47
PDLIM2-202ENST00000308354 HOXB4P17483 251 aaPredicted RBP18■□□□□ 0.47
PDLIM2-202ENST00000308354 B2MP61769 119 aa18■□□□□ 0.47
PDLIM2-202ENST00000308354 STPG3Q8N7X2 389 aa18■□□□□ 0.47
PDLIM2-202ENST00000308354 FBXL15Q9H469 300 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms