RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 HAGHQ16775 308 aa12.85□□□□□ -0.35
HMGCLL1-202ENST00000308161 Q56UQ5 140 aa12.85□□□□□ -0.35
HMGCLL1-202ENST00000308161 SPINK9Q5DT21 86 aa12.85□□□□□ -0.35
HMGCLL1-202ENST00000308161 ZNF57Q68EA5 555 aaPredicted RBP12.85□□□□□ -0.35
HMGCLL1-202ENST00000308161 FAAP20Q6NZ36 180 aa12.85□□□□□ -0.35
HMGCLL1-202ENST00000308161 TMEM61Q8N0U2 210 aa12.85□□□□□ -0.35
HMGCLL1-202ENST00000308161 TMEM229BQ8NBD8 167 aa12.85□□□□□ -0.35
HMGCLL1-202ENST00000308161 RAB2BQ8WUD1 216 aa12.85□□□□□ -0.35
HMGCLL1-202ENST00000308161 MISP3Q96FF7 219 aa12.85□□□□□ -0.35
HMGCLL1-202ENST00000308161 ZNF486Q96H40 463 aaPredicted RBP12.85□□□□□ -0.35
HMGCLL1-202ENST00000308161 PALMDQ9NP74 551 aa12.85□□□□□ -0.35
HMGCLL1-202ENST00000308161 C21orf62Q9NYP8 219 aa12.85□□□□□ -0.35
HMGCLL1-202ENST00000308161 COPZ2Q9P299 210 aa12.85□□□□□ -0.35
HMGCLL1-202ENST00000308161 MLXQ9UH92 298 aa12.85□□□□□ -0.35
HMGCLL1-202ENST00000308161 GABARAPH6UMI1 98 aa12.84□□□□□ -0.35
HMGCLL1-202ENST00000308161 RND3P61587 244 aa12.84□□□□□ -0.35
HMGCLL1-202ENST00000308161 IL18Q14116 193 aa12.84□□□□□ -0.35
HMGCLL1-202ENST00000308161 TRIM16LQ309B1 348 aa12.84□□□□□ -0.35
HMGCLL1-202ENST00000308161 STEAP1BQ6NZ63 245 aa12.84□□□□□ -0.35
HMGCLL1-202ENST00000308161 CADM3Q8N126 398 aa12.84□□□□□ -0.35
HMGCLL1-202ENST00000308161 DEFB125Q8N687 156 aa12.84□□□□□ -0.35
HMGCLL1-202ENST00000308161 OR13C8Q8NGS7 320 aa12.84□□□□□ -0.35
HMGCLL1-202ENST00000308161 SCARB1Q8WTV0 552 aa12.84□□□□□ -0.35
HMGCLL1-202ENST00000308161 DIRAS2Q96HU8 199 aa12.84□□□□□ -0.35
HMGCLL1-202ENST00000308161 TP53RKQ96S44 253 aa12.84□□□□□ -0.35
HMGCLL1-202ENST00000308161 C20orf24Q9BUV8 137 aa12.84□□□□□ -0.35
HMGCLL1-202ENST00000308161 C6orf62Q9GZU0 229 aaPredicted RBP12.84□□□□□ -0.35
HMGCLL1-202ENST00000308161 UFC1Q9Y3C8 167 aa12.84□□□□□ -0.35
HMGCLL1-202ENST00000308161 IGHV3OR16-8A0A075B7F1 116 aa12.83□□□□□ -0.36
HMGCLL1-202ENST00000308161 C3orf85A0A1B0GTC6 90 aa12.83□□□□□ -0.36
HMGCLL1-202ENST00000308161 OR11H12B2RN74 326 aa12.83□□□□□ -0.36
HMGCLL1-202ENST00000308161 SP6Q3SY56 376 aa12.83□□□□□ -0.36
HMGCLL1-202ENST00000308161 CCDC71LQ8N9Z2 235 aa12.83□□□□□ -0.36
HMGCLL1-202ENST00000308161 TERB2Q8NHR7 220 aa12.83□□□□□ -0.36
HMGCLL1-202ENST00000308161 RNASE11Q8TAA1 199 aaKnown RBP12.83□□□□□ -0.36
HMGCLL1-202ENST00000308161 ZFAND1Q8TCF1 268 aa12.83□□□□□ -0.36
HMGCLL1-202ENST00000308161 MARCH1Q8TCQ1 289 aa12.83□□□□□ -0.36
HMGCLL1-202ENST00000308161 BSCL2Q96G97 398 aaPredicted RBP12.83□□□□□ -0.36
HMGCLL1-202ENST00000308161 SPATA25Q9BR10 227 aa12.83□□□□□ -0.36
HMGCLL1-202ENST00000308161 CEPT1Q9Y6K0 416 aa12.83□□□□□ -0.36
HMGCLL1-202ENST00000308161 K7EIM0 57 aa12.82□□□□□ -0.36
HMGCLL1-202ENST00000308161 IGHV3-48P01763 117 aa12.82□□□□□ -0.36
HMGCLL1-202ENST00000308161 CD74P04233 296 aa12.82□□□□□ -0.36
HMGCLL1-202ENST00000308161 HSPE1P61604 102 aaKnown RBP12.82□□□□□ -0.36
HMGCLL1-202ENST00000308161 MRPS10P82664 201 aaKnown RBP12.82□□□□□ -0.36
HMGCLL1-202ENST00000308161 PRCDQ00LT1 54 aa12.82□□□□□ -0.36
HMGCLL1-202ENST00000308161 SLC16A13Q7RTY0 426 aa12.82□□□□□ -0.36
HMGCLL1-202ENST00000308161 OR52B4Q8NGK2 314 aa12.82□□□□□ -0.36
HMGCLL1-202ENST00000308161 OR1L6Q8NGR2 347 aa12.82□□□□□ -0.36
HMGCLL1-202ENST00000308161 OR1P1Q8NH06 330 aa12.82□□□□□ -0.36
HMGCLL1-202ENST00000308161 MUC7Q8TAX7 377 aa12.82□□□□□ -0.36
HMGCLL1-202ENST00000308161 DYNC2LI1Q8TCX1 351 aa12.82□□□□□ -0.36
HMGCLL1-202ENST00000308161 PINX1Q96BK5 328 aaKnown RBP12.82□□□□□ -0.36
HMGCLL1-202ENST00000308161 CHRDL1Q9BU40 450 aa12.82□□□□□ -0.36
HMGCLL1-202ENST00000308161 SRD5A3Q9H8P0 318 aa12.82□□□□□ -0.36
HMGCLL1-202ENST00000308161 CCDC59Q9P031 241 aaKnown RBP12.82□□□□□ -0.36
HMGCLL1-202ENST00000308161 DNAH7Q8WXX0 4024 aa12.81□□□□□ -0.36
HMGCLL1-202ENST00000308161 C3orf84H3BNL1 204 aa12.81□□□□□ -0.36
HMGCLL1-202ENST00000308161 ZNF207O43670 478 aaKnown RBP12.81□□□□□ -0.36
HMGCLL1-202ENST00000308161 IGKV1-5P01602 117 aa12.81□□□□□ -0.36
HMGCLL1-202ENST00000308161 TMBIM6P55061 237 aa12.81□□□□□ -0.36
HMGCLL1-202ENST00000308161 RBPMS2Q6ZRY4 209 aaKnown RBP12.81□□□□□ -0.36
HMGCLL1-202ENST00000308161 OR2C3Q8N628 320 aa12.81□□□□□ -0.36
HMGCLL1-202ENST00000308161 SMIM4Q8WVI0 70 aa12.81□□□□□ -0.36
HMGCLL1-202ENST00000308161 TMEM190Q8WZ59 177 aa12.81□□□□□ -0.36
HMGCLL1-202ENST00000308161 MARC2Q969Z3 335 aa12.81□□□□□ -0.36
HMGCLL1-202ENST00000308161 ZNF436Q9C0F3 470 aaPredicted RBP12.81□□□□□ -0.36
HMGCLL1-202ENST00000308161 RETNQ9HD89 108 aa12.81□□□□□ -0.36
HMGCLL1-202ENST00000308161 DISC1C4P0D8 188 aa12.8□□□□□ -0.36
HMGCLL1-202ENST00000308161 ATG12O94817 140 aa12.8□□□□□ -0.36
HMGCLL1-202ENST00000308161 IFNA17P01571 189 aa12.8□□□□□ -0.36
HMGCLL1-202ENST00000308161 RPL5P46777 297 aaKnown RBP12.8□□□□□ -0.36
HMGCLL1-202ENST00000308161 ERHP84090 104 aaKnown RBP12.8□□□□□ -0.36
HMGCLL1-202ENST00000308161 MEF2DQ14814 521 aa12.8□□□□□ -0.36
HMGCLL1-202ENST00000308161 SPSB3Q6PJ21 355 aa12.8□□□□□ -0.36
HMGCLL1-202ENST00000308161 SLC35G3Q8N808 338 aa12.8□□□□□ -0.36
HMGCLL1-202ENST00000308161 PDCD10Q9BUL8 212 aa12.8□□□□□ -0.36
HMGCLL1-202ENST00000308161 MRPL27Q9P0M9 148 aaKnown RBP12.8□□□□□ -0.36
HMGCLL1-202ENST00000308161 C14orf166Q9Y224 244 aaKnown RBP12.8□□□□□ -0.36
HMGCLL1-202ENST00000308161 F8W735 103 aaPredicted RBP12.79□□□□□ -0.36
HMGCLL1-202ENST00000308161 H3BMQ9 156 aa12.79□□□□□ -0.36
HMGCLL1-202ENST00000308161 MT-CO2P00403 227 aa12.79□□□□□ -0.36
HMGCLL1-202ENST00000308161 CTSDP07339 412 aaPredicted RBP12.79□□□□□ -0.36
HMGCLL1-202ENST00000308161 ADMP35318 185 aa12.79□□□□□ -0.36
HMGCLL1-202ENST00000308161 ELLP55199 621 aaPredicted RBP12.79□□□□□ -0.36
HMGCLL1-202ENST00000308161 SSBP1Q04837 148 aaKnown RBP12.79□□□□□ -0.36
HMGCLL1-202ENST00000308161 OR4C16Q8NGL9 310 aa12.79□□□□□ -0.36
HMGCLL1-202ENST00000308161 RRNAD1Q96FB5 475 aaKnown RBP12.79□□□□□ -0.36
HMGCLL1-202ENST00000308161 CITED4Q96RK1 184 aa12.79□□□□□ -0.36
HMGCLL1-202ENST00000308161 FAM110AQ9BQ89 295 aa12.79□□□□□ -0.36
HMGCLL1-202ENST00000308161 BCL7BQ9BQE9 202 aa12.79□□□□□ -0.36
HMGCLL1-202ENST00000308161 DAZ1Q9NQZ3 744 aaKnown RBP12.79□□□□□ -0.36
HMGCLL1-202ENST00000308161 A0A0B4J293 547 aa12.78□□□□□ -0.36
HMGCLL1-202ENST00000308161 TEX13DA0A0J9YY54 714 aaPredicted RBP12.78□□□□□ -0.36
HMGCLL1-202ENST00000308161 RBMY1BA6NDE4 496 aaKnown RBP12.78□□□□□ -0.36
HMGCLL1-202ENST00000308161 RBMY1EA6NEQ0 496 aaKnown RBP12.78□□□□□ -0.36
HMGCLL1-202ENST00000308161 NDUFA4O00483 81 aa12.78□□□□□ -0.36
HMGCLL1-202ENST00000308161 NUPL2O15504 423 aaKnown RBP12.78□□□□□ -0.36
HMGCLL1-202ENST00000308161 ST8SIA3O43173 380 aa12.78□□□□□ -0.36
HMGCLL1-202ENST00000308161 YIF1AO95070 293 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms