RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 UCHL1P09936 223 aa8.4□□□□□ -1.06
SMIM4-201ENST00000307106 TRAPPC2P0DI81 140 aa8.4□□□□□ -1.06
SMIM4-201ENST00000307106 TRAPPC2BP0DI82 140 aa8.4□□□□□ -1.06
SMIM4-201ENST00000307106 HIST1H1DP16402 221 aaKnown RBP8.4□□□□□ -1.06
SMIM4-201ENST00000307106 GADD45AP24522 165 aa8.4□□□□□ -1.06
SMIM4-201ENST00000307106 FAM3BP58499 235 aaPredicted RBP8.4□□□□□ -1.06
SMIM4-201ENST00000307106 ACTL10Q5JWF8 245 aa8.4□□□□□ -1.06
SMIM4-201ENST00000307106 ZNF773Q6PK81 442 aa8.4□□□□□ -1.06
SMIM4-201ENST00000307106 SPAG16Q8N0X2 631 aa8.4□□□□□ -1.06
SMIM4-201ENST00000307106 OR10R2Q8NGX6 335 aa8.4□□□□□ -1.06
SMIM4-201ENST00000307106 FAM3DQ96BQ1 224 aa8.4□□□□□ -1.06
SMIM4-201ENST00000307106 GINS3Q9BRX5 216 aa8.4□□□□□ -1.06
SMIM4-201ENST00000307106 YTHDF1Q9BYJ9 559 aaKnown RBP8.4□□□□□ -1.06
SMIM4-201ENST00000307106 UBR4Q5T4S7 5183 aa8.39□□□□□ -1.07
SMIM4-201ENST00000307106 TMEM272A0A1B0GTI8 110 aa8.39□□□□□ -1.07
SMIM4-201ENST00000307106 TNFSF12O43508 249 aa8.39□□□□□ -1.07
SMIM4-201ENST00000307106 CIB2O75838 187 aa8.39□□□□□ -1.07
SMIM4-201ENST00000307106 ZNF688P0C7X2 276 aa8.39□□□□□ -1.07
SMIM4-201ENST00000307106 HTN3P15516 51 aa8.39□□□□□ -1.07
SMIM4-201ENST00000307106 EMP1P54849 157 aa8.39□□□□□ -1.07
SMIM4-201ENST00000307106 TAS2R31P59538 309 aa8.39□□□□□ -1.07
SMIM4-201ENST00000307106 POU2AF1Q16633 256 aa8.39□□□□□ -1.07
SMIM4-201ENST00000307106 NXF2Q9GZY0 626 aaKnown RBP8.39□□□□□ -1.07
SMIM4-201ENST00000307106 TMEM140Q9NV12 185 aa8.39□□□□□ -1.07
SMIM4-201ENST00000307106 RAB22AQ9UL26 194 aa8.39□□□□□ -1.07
SMIM4-201ENST00000307106 TEX50A0A1B0GTY4 177 aa8.38□□□□□ -1.07
SMIM4-201ENST00000307106 K7EQG2 157 aa8.38□□□□□ -1.07
SMIM4-201ENST00000307106 FGF2P09038 288 aa8.38□□□□□ -1.07
SMIM4-201ENST00000307106 CTXN2P0C2S0 81 aa8.38□□□□□ -1.07
SMIM4-201ENST00000307106 NQO2P16083 231 aa8.38□□□□□ -1.07
SMIM4-201ENST00000307106 RANBP1P43487 201 aa8.38□□□□□ -1.07
SMIM4-201ENST00000307106 MFAP4P55083 255 aa8.38□□□□□ -1.07
SMIM4-201ENST00000307106 NANOGP1Q8N7R0 232 aa8.38□□□□□ -1.07
SMIM4-201ENST00000307106 DMBX1Q8NFW5 382 aa8.38□□□□□ -1.07
SMIM4-201ENST00000307106 STXBP6Q8NFX7 210 aa8.38□□□□□ -1.07
SMIM4-201ENST00000307106 OR1L8Q8NGR8 309 aa8.38□□□□□ -1.07
SMIM4-201ENST00000307106 LSM10Q969L4 123 aaKnown RBP8.38□□□□□ -1.07
SMIM4-201ENST00000307106 SLC25A46Q96AG3 418 aa8.38□□□□□ -1.07
SMIM4-201ENST00000307106 GRAMD2BQ96HH9 432 aa8.38□□□□□ -1.07
SMIM4-201ENST00000307106 C18orf15Q96N68 181 aa8.38□□□□□ -1.07
SMIM4-201ENST00000307106 NIPSNAP3BQ9BS92 247 aa8.38□□□□□ -1.07
SMIM4-201ENST00000307106 ATG101Q9BSB4 218 aa8.38□□□□□ -1.07
SMIM4-201ENST00000307106 HINT2Q9BX68 163 aa8.38□□□□□ -1.07
SMIM4-201ENST00000307106 C1QTNF4Q9BXJ3 329 aa8.38□□□□□ -1.07
SMIM4-201ENST00000307106 XCL2Q9UBD3 114 aa8.38□□□□□ -1.07
SMIM4-201ENST00000307106 FAT1Q14517 4588 aa8.37□□□□□ -1.07
SMIM4-201ENST00000307106 RBFOX2O43251 390 aaKnown RBP eCLIP8.37□□□□□ -1.07
SMIM4-201ENST00000307106 HPRT1P00492 218 aa8.37□□□□□ -1.07
SMIM4-201ENST00000307106 DTYMKP23919 212 aa8.37□□□□□ -1.07
SMIM4-201ENST00000307106 RASSF2P50749 326 aa8.37□□□□□ -1.07
SMIM4-201ENST00000307106 KRTAP10-2P60368 255 aa8.37□□□□□ -1.07
SMIM4-201ENST00000307106 TMEM88Q6PEY1 159 aa8.37□□□□□ -1.07
SMIM4-201ENST00000307106 TOMM20LQ6UXN7 152 aa8.37□□□□□ -1.07
SMIM4-201ENST00000307106 AHSA2Q719I0 299 aa8.37□□□□□ -1.07
SMIM4-201ENST00000307106 DCSTAMPQ9H295 470 aa8.37□□□□□ -1.07
SMIM4-201ENST00000307106 TMEM231Q9H6L2 316 aa8.37□□□□□ -1.07
SMIM4-201ENST00000307106 NDUFA4L2Q9NRX3 87 aa8.37□□□□□ -1.07
SMIM4-201ENST00000307106 ELF5Q9UKW6 265 aaPredicted RBP8.37□□□□□ -1.07
SMIM4-201ENST00000307106 TMEM189A5PLL7 270 aa8.36□□□□□ -1.07
SMIM4-201ENST00000307106 SULT1C2O00338 296 aa8.36□□□□□ -1.07
SMIM4-201ENST00000307106 GNG7O60262 68 aa8.36□□□□□ -1.07
SMIM4-201ENST00000307106 NUTF2P61970 127 aaKnown RBP8.36□□□□□ -1.07
SMIM4-201ENST00000307106 RCN1Q15293 331 aa8.36□□□□□ -1.07
SMIM4-201ENST00000307106 HES5Q5TA89 166 aa8.36□□□□□ -1.07
SMIM4-201ENST00000307106 FAM222AQ5U5X8 452 aa8.36□□□□□ -1.07
SMIM4-201ENST00000307106 Q5VSD8 79 aa8.36□□□□□ -1.07
SMIM4-201ENST00000307106 ZFP1Q6P2D0 407 aa8.36□□□□□ -1.07
SMIM4-201ENST00000307106 ZNRF2Q8NHG8 242 aa8.36□□□□□ -1.07
SMIM4-201ENST00000307106 MISP3Q96FF7 219 aa8.36□□□□□ -1.07
SMIM4-201ENST00000307106 TXN2Q99757 166 aa8.36□□□□□ -1.07
SMIM4-201ENST00000307106 CCL28Q9NRJ3 127 aa8.36□□□□□ -1.07
SMIM4-201ENST00000307106 DKK2Q9UBU2 259 aa8.36□□□□□ -1.07
SMIM4-201ENST00000307106 TEX48A0A1B0GUV7 120 aa8.35□□□□□ -1.07
SMIM4-201ENST00000307106 I3L2K1 104 aa8.35□□□□□ -1.07
SMIM4-201ENST00000307106 IGHV3-48P01763 117 aa8.35□□□□□ -1.07
SMIM4-201ENST00000307106 CATR1Q13166 79 aa8.35□□□□□ -1.07
SMIM4-201ENST00000307106 CNIH2Q6PI25 160 aa8.35□□□□□ -1.07
SMIM4-201ENST00000307106 ZNF705AQ6ZN79 300 aaPredicted RBP8.35□□□□□ -1.07
SMIM4-201ENST00000307106 LYPD1Q8N2G4 141 aa8.35□□□□□ -1.07
SMIM4-201ENST00000307106 C15orf53Q8NAA6 179 aa8.35□□□□□ -1.07
SMIM4-201ENST00000307106 SECTM1Q8WVN6 248 aa8.35□□□□□ -1.07
SMIM4-201ENST00000307106 FRZBQ92765 325 aa8.35□□□□□ -1.07
SMIM4-201ENST00000307106 TMEM203Q969S6 136 aa8.35□□□□□ -1.07
SMIM4-201ENST00000307106 RAB40CQ96S21 281 aa8.35□□□□□ -1.07
SMIM4-201ENST00000307106 NEU1Q99519 415 aa8.35□□□□□ -1.07
SMIM4-201ENST00000307106 ZFAND3Q9H8U3 227 aa8.35□□□□□ -1.07
SMIM4-201ENST00000307106 PSORS1C1Q9UIG5 152 aa8.35□□□□□ -1.07
SMIM4-201ENST00000307106 V9GY05 133 aa8.35□□□□□ -1.07
SMIM4-201ENST00000307106 SMIM9A6NGZ8 99 aa8.34□□□□□ -1.07
SMIM4-201ENST00000307106 ARL6IP5O75915 188 aa8.34□□□□□ -1.07
SMIM4-201ENST00000307106 MT-CO2P00403 227 aa8.34□□□□□ -1.07
SMIM4-201ENST00000307106 FGF9P31371 208 aaPredicted RBP8.34□□□□□ -1.07
SMIM4-201ENST00000307106 OXA1LQ15070 435 aa8.34□□□□□ -1.07
SMIM4-201ENST00000307106 MSMO1Q15800 293 aa8.34□□□□□ -1.07
SMIM4-201ENST00000307106 TMEM91Q6ZNR0 172 aa8.34□□□□□ -1.07
SMIM4-201ENST00000307106 OR1P1Q8NH06 330 aa8.34□□□□□ -1.07
SMIM4-201ENST00000307106 DCANP1Q8TF63 244 aa8.34□□□□□ -1.07
SMIM4-201ENST00000307106 MND1Q9BWT6 205 aa8.34□□□□□ -1.07
SMIM4-201ENST00000307106 PLEKHA2Q9HB19 425 aa8.34□□□□□ -1.07
SMIM4-201ENST00000307106 OR51B2Q9Y5P1 312 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms