RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 FLYWCH2Q96CP2 140 aaKnown RBP12.08□□□□□ -0.48
PTPN9-201ENST00000306726 GNB4Q9HAV0 340 aa12.08□□□□□ -0.48
PTPN9-201ENST00000306726 DMXL1Q9Y485 3027 aa12.08□□□□□ -0.48
PTPN9-201ENST00000306726 NCOR2Q9Y618 2525 aa12.08□□□□□ -0.48
PTPN9-201ENST00000306726 TMSB15BA0A087X1C1 80 aa12.08□□□□□ -0.48
PTPN9-201ENST00000306726 C15orf62A8K5M9 175 aa12.08□□□□□ -0.48
PTPN9-201ENST00000306726 MKRN2OSH3BPM6 223 aa12.08□□□□□ -0.48
PTPN9-201ENST00000306726 APOA2P02652 100 aa12.08□□□□□ -0.48
PTPN9-201ENST00000306726 SP1P08047 785 aa12.08□□□□□ -0.48
PTPN9-201ENST00000306726 COX5BP10606 129 aa12.08□□□□□ -0.48
PTPN9-201ENST00000306726 MRPS11P82912 194 aaKnown RBP12.08□□□□□ -0.48
PTPN9-201ENST00000306726 ZNF718Q3SXZ3 478 aa12.08□□□□□ -0.48
PTPN9-201ENST00000306726 MRPS18CQ9Y3D5 142 aaKnown RBP12.08□□□□□ -0.48
PTPN9-201ENST00000306726 TEPPQ6URK8 271 aa12.07□□□□□ -0.48
PTPN9-201ENST00000306726 OR5R1Q8NH85 324 aa12.07□□□□□ -0.48
PTPN9-201ENST00000306726 DCAF16Q9NXF7 216 aa12.07□□□□□ -0.48
PTPN9-201ENST00000306726 CLEC5AQ9NY25 188 aa12.07□□□□□ -0.48
PTPN9-201ENST00000306726 AHRRA9YTQ3 701 aa12.07□□□□□ -0.48
PTPN9-201ENST00000306726 IGHV1-2P23083 117 aa12.07□□□□□ -0.48
PTPN9-201ENST00000306726 CHRNB4P30926 498 aa12.07□□□□□ -0.48
PTPN9-201ENST00000306726 ZNF138P52744 262 aa12.07□□□□□ -0.48
PTPN9-201ENST00000306726 RHOBP62745 196 aa12.07□□□□□ -0.48
PTPN9-201ENST00000306726 RPP30P78346 268 aaKnown RBP12.07□□□□□ -0.48
PTPN9-201ENST00000306726 C19orf35Q6ZS72 473 aa12.07□□□□□ -0.48
PTPN9-201ENST00000306726 FOXL2NBQ6ZUU3 175 aa12.07□□□□□ -0.48
PTPN9-201ENST00000306726 MUC15Q8N387 334 aa12.07□□□□□ -0.48
PTPN9-201ENST00000306726 OR2T6Q8NHC8 308 aa12.07□□□□□ -0.48
PTPN9-201ENST00000306726 OR2V2Q96R30 315 aa12.07□□□□□ -0.48
PTPN9-201ENST00000306726 J3QR06 171 aa12.07□□□□□ -0.48
PTPN9-201ENST00000306726 M0R2Z0 102 aa12.07□□□□□ -0.48
PTPN9-201ENST00000306726 MLNRO43193 412 aa12.07□□□□□ -0.48
PTPN9-201ENST00000306726 RAB7AP51149 207 aa12.07□□□□□ -0.48
PTPN9-201ENST00000306726 LGALS4P56470 323 aa12.07□□□□□ -0.48
PTPN9-201ENST00000306726 ACTL10Q5JWF8 245 aa12.07□□□□□ -0.48
PTPN9-201ENST00000306726 IGFL3Q6UXB1 125 aa12.07□□□□□ -0.48
PTPN9-201ENST00000306726 ZADH2Q8N4Q0 377 aa12.07□□□□□ -0.48
PTPN9-201ENST00000306726 OR8G5Q8NG78 346 aa12.07□□□□□ -0.48
PTPN9-201ENST00000306726 RCHY1Q96PM5 261 aa12.07□□□□□ -0.48
PTPN9-201ENST00000306726 MGST2Q99735 147 aa12.07□□□□□ -0.48
PTPN9-201ENST00000306726 NAA38Q9BRA0 125 aaKnown RBP12.07□□□□□ -0.48
PTPN9-201ENST00000306726 HSPB7Q9UBY9 170 aa12.07□□□□□ -0.48
PTPN9-201ENST00000306726 TRAV17A0A0B4J275 112 aa12.06□□□□□ -0.48
PTPN9-201ENST00000306726 PDE6DO43924 150 aa12.06□□□□□ -0.48
PTPN9-201ENST00000306726 SPRNQ5BIV9 151 aa12.06□□□□□ -0.48
PTPN9-201ENST00000306726 ELOVL5Q9NYP7 299 aa12.06□□□□□ -0.48
PTPN9-201ENST00000306726 RPL8P62917 257 aaKnown RBP12.06□□□□□ -0.48
PTPN9-201ENST00000306726 MOB1BQ7L9L4 216 aa12.06□□□□□ -0.48
PTPN9-201ENST00000306726 ANKRD11Q6UB99 2663 aaPredicted RBP12.06□□□□□ -0.48
PTPN9-201ENST00000306726 TRAV1-1A0A0B4J248 108 aa12.06□□□□□ -0.48
PTPN9-201ENST00000306726 CXorf1O96002 111 aa12.06□□□□□ -0.48
PTPN9-201ENST00000306726 MOSP00540 346 aa12.06□□□□□ -0.48
PTPN9-201ENST00000306726 ATP6V1FQ16864 119 aa12.06□□□□□ -0.48
PTPN9-201ENST00000306726 SPSB4Q96A44 273 aa12.06□□□□□ -0.48
PTPN9-201ENST00000306726 COMMD5Q9GZQ3 224 aa12.06□□□□□ -0.48
PTPN9-201ENST00000306726 NRN1Q9NPD7 142 aa12.06□□□□□ -0.48
PTPN9-201ENST00000306726 SPRR3Q9UBC9 169 aa12.06□□□□□ -0.48
PTPN9-201ENST00000306726 SFTPCP11686 197 aa12.05□□□□□ -0.48
PTPN9-201ENST00000306726 SRP14P37108 136 aaKnown RBP12.05□□□□□ -0.48
PTPN9-201ENST00000306726 SETD2Q9BYW2 2564 aaPredicted RBP12.05□□□□□ -0.48
PTPN9-201ENST00000306726 C20orf202A1L168 122 aa12.05□□□□□ -0.48
PTPN9-201ENST00000306726 TGIF2LYQ8IUE0 185 aa12.05□□□□□ -0.48
PTPN9-201ENST00000306726 FAM216BQ8N7L0 139 aa12.05□□□□□ -0.48
PTPN9-201ENST00000306726 ITLN1Q8WWA0 313 aa12.05□□□□□ -0.48
PTPN9-201ENST00000306726 IGFBPL1Q8WX77 278 aa12.05□□□□□ -0.48
PTPN9-201ENST00000306726 CCL17Q92583 94 aa12.05□□□□□ -0.48
PTPN9-201ENST00000306726 C2orf88Q9BSF0 95 aa12.05□□□□□ -0.48
PTPN9-201ENST00000306726 FBXL7Q9UJT9 491 aa12.05□□□□□ -0.48
PTPN9-201ENST00000306726 FAM90A10PA6NDY2 464 aa12.05□□□□□ -0.48
PTPN9-201ENST00000306726 FAM90A18PA6NE21 464 aa12.05□□□□□ -0.48
PTPN9-201ENST00000306726 FAM90A16PA6NEW6 464 aa12.05□□□□□ -0.48
PTPN9-201ENST00000306726 FAM90A20PA6NIJ5 464 aa12.05□□□□□ -0.48
PTPN9-201ENST00000306726 FAM90A8PA6NJQ4 464 aa12.05□□□□□ -0.48
PTPN9-201ENST00000306726 FAM90A7PA6NKC0 464 aa12.05□□□□□ -0.48
PTPN9-201ENST00000306726 FAM90A22PA8MWA6 464 aa12.05□□□□□ -0.48
PTPN9-201ENST00000306726 FAM90A12PA8MX19 464 aa12.05□□□□□ -0.48
PTPN9-201ENST00000306726 FAM90A5PA8MXJ8 464 aa12.05□□□□□ -0.48
PTPN9-201ENST00000306726 FAM90A23PA8MXZ1 464 aa12.05□□□□□ -0.48
PTPN9-201ENST00000306726 FAM90A15PP0C7V4 464 aa12.05□□□□□ -0.48
PTPN9-201ENST00000306726 FAM90A13PP0C7W8 464 aa12.05□□□□□ -0.48
PTPN9-201ENST00000306726 FAM90A14PP0C7W9 464 aa12.05□□□□□ -0.48
PTPN9-201ENST00000306726 FAM90A24PP0C7X0 464 aa12.05□□□□□ -0.48
PTPN9-201ENST00000306726 FXYD7P58549 80 aa12.05□□□□□ -0.48
PTPN9-201ENST00000306726 RNPS1Q15287 305 aaKnown RBP12.05□□□□□ -0.48
PTPN9-201ENST00000306726 EFNB3Q15768 340 aa12.05□□□□□ -0.48
PTPN9-201ENST00000306726 ACSF3Q4G176 576 aaPredicted RBP12.05□□□□□ -0.48
PTPN9-201ENST00000306726 IBA57Q5T440 356 aaKnown RBP12.05□□□□□ -0.48
PTPN9-201ENST00000306726 NABP2Q9BQ15 211 aa12.05□□□□□ -0.48
PTPN9-201ENST00000306726 AGMATQ9BSE5 352 aa12.05□□□□□ -0.48
PTPN9-201ENST00000306726 NPVFQ9HCQ7 196 aa12.05□□□□□ -0.48
PTPN9-201ENST00000306726 NCKAP5O14513 1909 aa12.04□□□□□ -0.48
PTPN9-201ENST00000306726 TDGF1P3P51864 188 aa12.04□□□□□ -0.48
PTPN9-201ENST00000306726 UBE2G1P62253 170 aa12.04□□□□□ -0.48
PTPN9-201ENST00000306726 RPL19P84098 196 aaKnown RBP12.04□□□□□ -0.48
PTPN9-201ENST00000306726 SSX8Q7RTT4 187 aa12.04□□□□□ -0.48
PTPN9-201ENST00000306726 OR1B1Q8NGR6 318 aa12.04□□□□□ -0.48
PTPN9-201ENST00000306726 VPS25Q9BRG1 176 aa12.04□□□□□ -0.48
PTPN9-201ENST00000306726 GGTLC1Q9BX51 225 aa12.04□□□□□ -0.48
PTPN9-201ENST00000306726 WIPI2Q9Y4P8 454 aa12.04□□□□□ -0.48
PTPN9-201ENST00000306726 IGHV3OR16-8A0A075B7F1 116 aa12.04□□□□□ -0.48
PTPN9-201ENST00000306726 BCL2L2Q92843 193 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms