RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 CENPFP49454 3210 aa7.61□□□□□ -1.19
PTPRE-202ENST00000306042 CTXND1A0A1B0GTU2 59 aa7.61□□□□□ -1.19
PTPRE-202ENST00000306042 CGB1A6NKQ9 187 aa7.61□□□□□ -1.19
PTPRE-202ENST00000306042 PLA2G2AP14555 144 aa7.61□□□□□ -1.19
PTPRE-202ENST00000306042 CCKARP32238 428 aa7.61□□□□□ -1.19
PTPRE-202ENST00000306042 MIC13Q5XKP0 118 aa7.61□□□□□ -1.19
PTPRE-202ENST00000306042 OR10C1Q96KK4 312 aa7.61□□□□□ -1.19
PTPRE-202ENST00000306042 MANBALQ9NQG1 85 aa7.61□□□□□ -1.19
PTPRE-202ENST00000306042 ZNF705GA8MUZ8 300 aaPredicted RBP7.6□□□□□ -1.19
PTPRE-202ENST00000306042 FAM157CP0CG43 387 aa7.6□□□□□ -1.19
PTPRE-202ENST00000306042 FOSL1P15407 271 aa7.6□□□□□ -1.19
PTPRE-202ENST00000306042 TSPOP30536 169 aa7.6□□□□□ -1.19
PTPRE-202ENST00000306042 RPL30P62888 115 aaKnown RBP7.6□□□□□ -1.19
PTPRE-202ENST00000306042 SRSF7Q16629 238 aaKnown RBP eCLIP7.6□□□□□ -1.19
PTPRE-202ENST00000306042 LYRM2Q9NU23 88 aaPredicted RBP7.6□□□□□ -1.19
PTPRE-202ENST00000306042 UFC1Q9Y3C8 167 aa7.6□□□□□ -1.19
PTPRE-202ENST00000306042 URGCP-MRPS24S4R325 110 aa7.6□□□□□ -1.19
PTPRE-202ENST00000306042 CEP350Q5VT06 3117 aa7.6□□□□□ -1.19
PTPRE-202ENST00000306042 NAPSAO96009 420 aa7.6□□□□□ -1.19
PTPRE-202ENST00000306042 SERF2P84101 59 aa7.6□□□□□ -1.19
PTPRE-202ENST00000306042 TEX36Q5VZQ5 186 aa7.6□□□□□ -1.19
PTPRE-202ENST00000306042 ZNF680Q8NEM1 530 aa7.6□□□□□ -1.19
PTPRE-202ENST00000306042 SONP18583 2426 aaKnown RBP7.6□□□□□ -1.19
PTPRE-202ENST00000306042 IGHV3OR16-8A0A075B7F1 116 aa7.6□□□□□ -1.19
PTPRE-202ENST00000306042 IGHV4-61A0A0C4DH41 118 aa7.6□□□□□ -1.19
PTPRE-202ENST00000306042 CD8AP01732 235 aa7.6□□□□□ -1.19
PTPRE-202ENST00000306042 IGHV2-5P01817 119 aa7.6□□□□□ -1.19
PTPRE-202ENST00000306042 ATP6V0CP27449 155 aa7.6□□□□□ -1.19
PTPRE-202ENST00000306042 C5orf64Q2M2E5 130 aa7.6□□□□□ -1.19
PTPRE-202ENST00000306042 ZNF660Q6AZW8 331 aaPredicted RBP7.6□□□□□ -1.19
PTPRE-202ENST00000306042 GFI1Q99684 422 aa7.6□□□□□ -1.19
PTPRE-202ENST00000306042 CTDSP1Q9GZU7 261 aa7.6□□□□□ -1.19
PTPRE-202ENST00000306042 ELOA3CA0A087WX78 387 aaPredicted RBP7.6□□□□□ -1.19
PTPRE-202ENST00000306042 OR2T8A6NH00 312 aa7.6□□□□□ -1.19
PTPRE-202ENST00000306042 DLK1P80370 383 aa7.6□□□□□ -1.19
PTPRE-202ENST00000306042 GUK1Q16774 197 aa7.6□□□□□ -1.19
PTPRE-202ENST00000306042 C2orf68Q2NKX9 166 aa7.6□□□□□ -1.19
PTPRE-202ENST00000306042 AARDQ4LEZ3 155 aa7.6□□□□□ -1.19
PTPRE-202ENST00000306042 RNASEH2CQ8TDP1 164 aaKnown RBP7.6□□□□□ -1.19
PTPRE-202ENST00000306042 TP53BP1Q12888 1972 aaPredicted RBP7.6□□□□□ -1.19
PTPRE-202ENST00000306042 C7orf66A4D0T2 115 aa7.59□□□□□ -1.19
PTPRE-202ENST00000306042 C11orf94C9JXX5 98 aa7.59□□□□□ -1.19
PTPRE-202ENST00000306042 LOXP28300 417 aaPredicted RBP7.59□□□□□ -1.19
PTPRE-202ENST00000306042 RNF144BQ7Z419 303 aa7.59□□□□□ -1.19
PTPRE-202ENST00000306042 OR11H7Q8NGC8 314 aa7.59□□□□□ -1.19
PTPRE-202ENST00000306042 TXN2Q99757 166 aa7.59□□□□□ -1.19
PTPRE-202ENST00000306042 OR5AC2Q9NZP5 309 aa7.59□□□□□ -1.19
PTPRE-202ENST00000306042 IGHV3-66A0A0C4DH42 116 aa7.59□□□□□ -1.19
PTPRE-202ENST00000306042 C15orf61A6NNL5 157 aa7.59□□□□□ -1.19
PTPRE-202ENST00000306042 RUNX1Q01196 453 aa7.59□□□□□ -1.19
PTPRE-202ENST00000306042 ZNF329Q86UD4 541 aa7.59□□□□□ -1.19
PTPRE-202ENST00000306042 GBGT1Q8N5D6 347 aa7.59□□□□□ -1.19
PTPRE-202ENST00000306042 NECAP1Q8NC96 275 aa7.59□□□□□ -1.19
PTPRE-202ENST00000306042 ZMAT4Q9H898 229 aa7.59□□□□□ -1.19
PTPRE-202ENST00000306042 GAB2Q9UQC2 676 aa7.59□□□□□ -1.19
PTPRE-202ENST00000306042 NOTCH3Q9UM47 2321 aa7.59□□□□□ -1.19
PTPRE-202ENST00000306042 YLPM1P49750 1951 aaKnown RBP7.59□□□□□ -1.19
PTPRE-202ENST00000306042 GATCO43716 136 aaKnown RBP7.59□□□□□ -1.19
PTPRE-202ENST00000306042 RAMP3O60896 148 aa7.59□□□□□ -1.19
PTPRE-202ENST00000306042 SUMO1P63165 101 aaKnown RBP7.59□□□□□ -1.19
PTPRE-202ENST00000306042 RSPO1Q2MKA7 263 aaPredicted RBP7.59□□□□□ -1.19
PTPRE-202ENST00000306042 BEND2Q8NDZ0 799 aa7.59□□□□□ -1.19
PTPRE-202ENST00000306042 TAF15Q92804 592 aaKnown RBP eCLIP7.59□□□□□ -1.19
PTPRE-202ENST00000306042 PHYHIPLQ96FC7 376 aa7.59□□□□□ -1.19
PTPRE-202ENST00000306042 RSG1Q9BU20 258 aa7.59□□□□□ -1.19
PTPRE-202ENST00000306042 ZNF106Q9H2Y7 1883 aaKnown RBP7.59□□□□□ -1.19
PTPRE-202ENST00000306042 IGKV1D-8A0A087WSZ0 117 aa7.59□□□□□ -1.2
PTPRE-202ENST00000306042 PPP5D1E7EU14 171 aa7.59□□□□□ -1.2
PTPRE-202ENST00000306042 C19orf84I3L1E1 186 aa7.59□□□□□ -1.2
PTPRE-202ENST00000306042 SAP30O75446 220 aa7.59□□□□□ -1.2
PTPRE-202ENST00000306042 PSG9Q00887 426 aa7.59□□□□□ -1.2
PTPRE-202ENST00000306042 PRSS57Q6UWY2 283 aa7.59□□□□□ -1.2
PTPRE-202ENST00000306042 PQLC2Q6ZP29 291 aa7.59□□□□□ -1.2
PTPRE-202ENST00000306042 KLHL30-AS1Q8NEE0 82 aa7.59□□□□□ -1.2
PTPRE-202ENST00000306042 C10orf105Q8TEF2 133 aa7.59□□□□□ -1.2
PTPRE-202ENST00000306042 PRSS8Q16651 343 aa7.58□□□□□ -1.2
PTPRE-202ENST00000306042 SIGIRRQ6IA17 410 aa7.58□□□□□ -1.2
PTPRE-202ENST00000306042 WDR86Q86TI4 376 aa7.58□□□□□ -1.2
PTPRE-202ENST00000306042 BET1LQ9NYM9 111 aa7.58□□□□□ -1.2
PTPRE-202ENST00000306042 SLC31A2O15432 143 aa7.58□□□□□ -1.2
PTPRE-202ENST00000306042 IGKV3-20P01619 116 aa7.58□□□□□ -1.2
PTPRE-202ENST00000306042 ASCL4Q6XD76 172 aa7.58□□□□□ -1.2
PTPRE-202ENST00000306042 LHFPL4Q7Z7J7 247 aa7.58□□□□□ -1.2
PTPRE-202ENST00000306042 KAAG1Q9UBP8 84 aa7.58□□□□□ -1.2
PTPRE-202ENST00000306042 TNFSF18Q9UNG2 199 aa7.58□□□□□ -1.2
PTPRE-202ENST00000306042 ZNF257Q9Y2Q1 563 aa7.58□□□□□ -1.2
PTPRE-202ENST00000306042 TRBV6-6A0A0A6YYG2 114 aa7.58□□□□□ -1.2
PTPRE-202ENST00000306042 BAGE3Q86Y29 109 aa7.58□□□□□ -1.2
PTPRE-202ENST00000306042 BAGE2Q86Y30 109 aa7.58□□□□□ -1.2
PTPRE-202ENST00000306042 CACNG8Q8WXS5 425 aa7.58□□□□□ -1.2
PTPRE-202ENST00000306042 HSBP1L1C9JCN9 74 aa7.58□□□□□ -1.2
PTPRE-202ENST00000306042 PAGE4O60829 102 aa7.58□□□□□ -1.2
PTPRE-202ENST00000306042 IGHV2-70P01814 119 aa7.58□□□□□ -1.2
PTPRE-202ENST00000306042 RTBDNQ9BSG5 229 aaPredicted RBP7.58□□□□□ -1.2
PTPRE-202ENST00000306042 NKX6-2Q9C056 277 aaPredicted RBP7.58□□□□□ -1.2
PTPRE-202ENST00000306042 H0YJW9 148 aa7.57□□□□□ -1.2
PTPRE-202ENST00000306042 C8orf88P0DMB2 117 aa7.57□□□□□ -1.2
PTPRE-202ENST00000306042 LMO1P25800 156 aa7.57□□□□□ -1.2
PTPRE-202ENST00000306042 NDUFA6P56556 154 aa7.57□□□□□ -1.2
PTPRE-202ENST00000306042 DUX4L9Q6RFH8 374 aaPredicted RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms