RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 IGLV3-12A0A075B6K2 115 aa11.71□□□□□ -0.53
PRKCB-201ENST00000303531 A0A087WWC5 75 aa11.71□□□□□ -0.53
PRKCB-201ENST00000303531 PRELID3AQ96N28 172 aa11.71□□□□□ -0.53
PRKCB-201ENST00000303531 NYNRINQ9P2P1 1898 aaKnown RBP11.71□□□□□ -0.53
PRKCB-201ENST00000303531 LHX2P50458 406 aa11.71□□□□□ -0.53
PRKCB-201ENST00000303531 KLRB1Q12918 225 aa11.71□□□□□ -0.54
PRKCB-201ENST00000303531 FBXL7Q9UJT9 491 aa11.71□□□□□ -0.54
PRKCB-201ENST00000303531 MRPS18CQ9Y3D5 142 aaKnown RBP11.71□□□□□ -0.54
PRKCB-201ENST00000303531 ABCA1O95477 2261 aa11.71□□□□□ -0.54
PRKCB-201ENST00000303531 MUC21A0A0G2JKD1 596 aa11.71□□□□□ -0.54
PRKCB-201ENST00000303531 MUC21A0A140T8X8 626 aa11.71□□□□□ -0.54
PRKCB-201ENST00000303531 JOSD1Q15040 202 aaPredicted RBP11.71□□□□□ -0.54
PRKCB-201ENST00000303531 MUC21Q5SSG8 566 aa11.71□□□□□ -0.54
PRKCB-201ENST00000303531 FAM181BA6NEQ2 426 aa11.7□□□□□ -0.54
PRKCB-201ENST00000303531 CENPVQ7Z7K6 275 aaPredicted RBP11.7□□□□□ -0.54
PRKCB-201ENST00000303531 NPIPB7O75200 414 aa11.7□□□□□ -0.54
PRKCB-201ENST00000303531 CIRBPQ14011 172 aaKnown RBP11.7□□□□□ -0.54
PRKCB-201ENST00000303531 C9orf106Q8NAJ2 232 aa11.7□□□□□ -0.54
PRKCB-201ENST00000303531 FBLN5Q9UBX5 448 aa11.7□□□□□ -0.54
PRKCB-201ENST00000303531 LCTP09848 1927 aa11.7□□□□□ -0.54
PRKCB-201ENST00000303531 A1L4Q6 167 aa11.7□□□□□ -0.54
PRKCB-201ENST00000303531 SRSF3P84103 164 aaKnown RBP11.7□□□□□ -0.54
PRKCB-201ENST00000303531 C9JCJ5 164 aa11.7□□□□□ -0.54
PRKCB-201ENST00000303531 M0R381 172 aa11.7□□□□□ -0.54
PRKCB-201ENST00000303531 APOHP02749 345 aaPredicted RBP11.7□□□□□ -0.54
PRKCB-201ENST00000303531 FAM90A1Q86YD7 464 aa11.7□□□□□ -0.54
PRKCB-201ENST00000303531 FMC1Q96HJ9 113 aa11.7□□□□□ -0.54
PRKCB-201ENST00000303531 CCL1P22362 96 aa11.7□□□□□ -0.54
PRKCB-201ENST00000303531 C14orf144Q96I85 54 aa11.7□□□□□ -0.54
PRKCB-201ENST00000303531 GFI1Q99684 422 aa11.7□□□□□ -0.54
PRKCB-201ENST00000303531 RPP21Q9H633 154 aaKnown RBP11.7□□□□□ -0.54
PRKCB-201ENST00000303531 GEMIN7Q9H840 131 aaKnown RBP11.7□□□□□ -0.54
PRKCB-201ENST00000303531 MOB4Q9Y3A3 225 aa11.7□□□□□ -0.54
PRKCB-201ENST00000303531 MEIG1Q5JSS6 88 aa11.69□□□□□ -0.54
PRKCB-201ENST00000303531 TEX29Q8N6K0 151 aa11.69□□□□□ -0.54
PRKCB-201ENST00000303531 LINC00312Q9Y6C7 94 aa11.69□□□□□ -0.54
PRKCB-201ENST00000303531 TRAV8-6A0A0B4J262 113 aa11.69□□□□□ -0.54
PRKCB-201ENST00000303531 IGKV3OR2-268A0A0C4DH90 116 aa11.69□□□□□ -0.54
PRKCB-201ENST00000303531 MEF2CQ06413 473 aaPredicted RBP11.69□□□□□ -0.54
PRKCB-201ENST00000303531 LRTM2Q8N967 370 aa11.69□□□□□ -0.54
PRKCB-201ENST00000303531 FOXD3Q9UJU5 478 aaPredicted RBP11.69□□□□□ -0.54
PRKCB-201ENST00000303531 C21orf62Q9NYP8 219 aa11.69□□□□□ -0.54
PRKCB-201ENST00000303531 ZNF319Q9P2F9 582 aa11.69□□□□□ -0.54
PRKCB-201ENST00000303531 GREB1Q4ZG55 1949 aa11.69□□□□□ -0.54
PRKCB-201ENST00000303531 SAA2-SAA4A0A096LPE2 208 aa11.69□□□□□ -0.54
PRKCB-201ENST00000303531 A0A1B0GUT8 65 aa11.69□□□□□ -0.54
PRKCB-201ENST00000303531 SAA2P0DJI9 122 aaPredicted RBP11.69□□□□□ -0.54
PRKCB-201ENST00000303531 TRIOBPQ9H2D6 2365 aa11.69□□□□□ -0.54
PRKCB-201ENST00000303531 IGHV3OR16-8A0A075B7F1 116 aa11.69□□□□□ -0.54
PRKCB-201ENST00000303531 OR11H12B2RN74 326 aa11.69□□□□□ -0.54
PRKCB-201ENST00000303531 CSRP2Q16527 193 aa11.69□□□□□ -0.54
PRKCB-201ENST00000303531 ABCA7Q8IZY2 2146 aa11.69□□□□□ -0.54
PRKCB-201ENST00000303531 PAQR4Q8N4S7 273 aaPredicted RBP11.69□□□□□ -0.54
PRKCB-201ENST00000303531 OR11H1Q8NG94 326 aa11.69□□□□□ -0.54
PRKCB-201ENST00000303531 OR11H2Q8NH07 326 aa11.69□□□□□ -0.54
PRKCB-201ENST00000303531 RNASEH2CQ8TDP1 164 aaKnown RBP11.69□□□□□ -0.54
PRKCB-201ENST00000303531 CACNG8Q8WXS5 425 aa11.69□□□□□ -0.54
PRKCB-201ENST00000303531 DOCK4Q8N1I0 1966 aa11.69□□□□□ -0.54
PRKCB-201ENST00000303531 GFRA3O60609 400 aa11.69□□□□□ -0.54
PRKCB-201ENST00000303531 RNASE1P07998 156 aaKnown RBP11.69□□□□□ -0.54
PRKCB-201ENST00000303531 RPL23P62829 140 aaKnown RBP11.69□□□□□ -0.54
PRKCB-201ENST00000303531 LEMD1Q68G75 181 aa11.69□□□□□ -0.54
PRKCB-201ENST00000303531 FAM57AQ8TBR7 257 aa11.69□□□□□ -0.54
PRKCB-201ENST00000303531 SAA1P0DJI8 122 aaPredicted RBP11.69□□□□□ -0.54
PRKCB-201ENST00000303531 GPR183P32249 361 aa11.69□□□□□ -0.54
PRKCB-201ENST00000303531 CEACAM4O75871 244 aa11.68□□□□□ -0.54
PRKCB-201ENST00000303531 SCGB1A1P11684 91 aa11.68□□□□□ -0.54
PRKCB-201ENST00000303531 TAS2R60P59551 318 aa11.68□□□□□ -0.54
PRKCB-201ENST00000303531 A0A0A6YYD4 124 aa11.68□□□□□ -0.54
PRKCB-201ENST00000303531 H0YIZ8 118 aa11.68□□□□□ -0.54
PRKCB-201ENST00000303531 ARPC1AQ92747 370 aa11.68□□□□□ -0.54
PRKCB-201ENST00000303531 RAMP3O60896 148 aa11.68□□□□□ -0.54
PRKCB-201ENST00000303531 EFEMP2O95967 443 aa11.68□□□□□ -0.54
PRKCB-201ENST00000303531 GSN-AS1Q9NRJ2 163 aa11.68□□□□□ -0.54
PRKCB-201ENST00000303531 Q9H3A6 140 aa11.68□□□□□ -0.54
PRKCB-201ENST00000303531 LOC102723996A0A087X1L8 192 aa11.68□□□□□ -0.54
PRKCB-201ENST00000303531 PPP1R17O96001 155 aa11.68□□□□□ -0.54
PRKCB-201ENST00000303531 SMIM13P0DJ93 91 aa11.68□□□□□ -0.54
PRKCB-201ENST00000303531 ZNF497Q6ZNH5 498 aa11.68□□□□□ -0.54
PRKCB-201ENST00000303531 RTN4RL2Q86UN3 420 aa11.68□□□□□ -0.54
PRKCB-201ENST00000303531 PPP1R27Q86WC6 154 aa11.68□□□□□ -0.54
PRKCB-201ENST00000303531 C17orf100A8MU93 164 aa11.67□□□□□ -0.54
PRKCB-201ENST00000303531 TFF1P04155 84 aa11.67□□□□□ -0.54
PRKCB-201ENST00000303531 CCL3L1P16619 93 aa11.67□□□□□ -0.54
PRKCB-201ENST00000303531 FAM89BQ8N5H3 189 aa11.67□□□□□ -0.54
PRKCB-201ENST00000303531 BEX4Q9NWD9 120 aaPredicted RBP11.67□□□□□ -0.54
PRKCB-201ENST00000303531 LOC105371267A0A1B0GV96 52 aa11.67□□□□□ -0.54
PRKCB-201ENST00000303531 TMEM170BQ5T4T1 132 aa11.67□□□□□ -0.54
PRKCB-201ENST00000303531 FAM19A2Q8N3H0 131 aa11.67□□□□□ -0.54
PRKCB-201ENST00000303531 ABHD17AQ96GS6 310 aa11.67□□□□□ -0.54
PRKCB-201ENST00000303531 SNAI2O43623 268 aa11.67□□□□□ -0.54
PRKCB-201ENST00000303531 CD55P08174 381 aa11.67□□□□□ -0.54
PRKCB-201ENST00000303531 ASIPP42127 132 aa11.67□□□□□ -0.54
PRKCB-201ENST00000303531 GCSAMLQ5JQS6 135 aa11.67□□□□□ -0.54
PRKCB-201ENST00000303531 PAPPA-AS1Q5QFB9 102 aa11.67□□□□□ -0.54
PRKCB-201ENST00000303531 ST6GALNAC6Q969X2 333 aa11.67□□□□□ -0.54
PRKCB-201ENST00000303531 IGLV3-32A0A0A0MS00 114 aa11.67□□□□□ -0.54
PRKCB-201ENST00000303531 NPFFO15130 113 aa11.67□□□□□ -0.54
PRKCB-201ENST00000303531 COPS9Q8WXC6 57 aa11.67□□□□□ -0.54
PRKCB-201ENST00000303531 MESP1Q9BRJ9 268 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms