RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 PRR20CP86479 221 aa19.93■□□□□ 0.78
SPTSSA-201ENST00000298130 PRR20DP86480 221 aa19.93■□□□□ 0.78
SPTSSA-201ENST00000298130 PRR20BP86481 221 aa19.93■□□□□ 0.78
SPTSSA-201ENST00000298130 PRR20AP86496 221 aa19.93■□□□□ 0.78
SPTSSA-201ENST00000298130 RAB31Q13636 194 aa19.93■□□□□ 0.78
SPTSSA-201ENST00000298130 TBX15Q96SF7 602 aa19.93■□□□□ 0.78
SPTSSA-201ENST00000298130 FAM215AQ9Y5M1 114 aa19.93■□□□□ 0.78
SPTSSA-201ENST00000298130 TRAV5A0A0B4J249 113 aa19.92■□□□□ 0.78
SPTSSA-201ENST00000298130 GLRXP35754 106 aa19.92■□□□□ 0.78
SPTSSA-201ENST00000298130 IGFL2Q6UWQ7 119 aa19.92■□□□□ 0.78
SPTSSA-201ENST00000298130 ZNF503Q96F45 646 aa19.92■□□□□ 0.78
SPTSSA-201ENST00000298130 GAFA1Q96PS6 74 aa19.92■□□□□ 0.78
SPTSSA-201ENST00000298130 TUBG2Q9NRH3 451 aa19.92■□□□□ 0.78
SPTSSA-201ENST00000298130 IL36BQ9NZH7 164 aa19.92■□□□□ 0.78
SPTSSA-201ENST00000298130 RNF7Q9UBF6 113 aa19.92■□□□□ 0.78
SPTSSA-201ENST00000298130 NAGKQ9UJ70 344 aa19.92■□□□□ 0.78
SPTSSA-201ENST00000298130 SNURFLB1AK76 121 aa19.92■□□□□ 0.78
SPTSSA-201ENST00000298130 IGHV1-46P01743 117 aa19.92■□□□□ 0.78
SPTSSA-201ENST00000298130 RPL29P47914 159 aaKnown RBP19.92■□□□□ 0.78
SPTSSA-201ENST00000298130 TAS2R60P59551 318 aa19.92■□□□□ 0.78
SPTSSA-201ENST00000298130 MORN5Q5VZ52 161 aa19.92■□□□□ 0.78
SPTSSA-201ENST00000298130 MMD2Q8IY49 270 aa19.92■□□□□ 0.78
SPTSSA-201ENST00000298130 SLC35D1Q9NTN3 355 aa19.92■□□□□ 0.78
SPTSSA-201ENST00000298130 ABCA1O95477 2261 aa19.92■□□□□ 0.78
SPTSSA-201ENST00000298130 DSCAML1Q8TD84 2053 aa19.91■□□□□ 0.78
SPTSSA-201ENST00000298130 KIR2DS2P43631 304 aa19.91■□□□□ 0.78
SPTSSA-201ENST00000298130 Q6ZWC4 215 aa19.91■□□□□ 0.78
SPTSSA-201ENST00000298130 LHFPL4Q7Z7J7 247 aa19.91■□□□□ 0.78
SPTSSA-201ENST00000298130 E7EUB6 86 aa19.91■□□□□ 0.78
SPTSSA-201ENST00000298130 K7EM74 188 aa19.91■□□□□ 0.78
SPTSSA-201ENST00000298130 SUMO1P63165 101 aaKnown RBP19.91■□□□□ 0.78
SPTSSA-201ENST00000298130 PRR31Q5SQ13 230 aa19.91■□□□□ 0.78
SPTSSA-201ENST00000298130 ST6GALNAC3Q8NDV1 305 aa19.91■□□□□ 0.78
SPTSSA-201ENST00000298130 OR2T6Q8NHC8 308 aa19.91■□□□□ 0.78
SPTSSA-201ENST00000298130 UHRF2Q96PU4 802 aa19.91■□□□□ 0.78
SPTSSA-201ENST00000298130 FAM103A1Q9BTL3 118 aaKnown RBP19.91■□□□□ 0.78
SPTSSA-201ENST00000298130 RAI1Q7Z5J4 1906 aaPredicted RBP19.91■□□□□ 0.78
SPTSSA-201ENST00000298130 CA1P00915 261 aaPredicted RBP19.9■□□□□ 0.78
SPTSSA-201ENST00000298130 CFHR2P36980 270 aa19.9■□□□□ 0.78
SPTSSA-201ENST00000298130 CDKN1AP38936 164 aa19.9■□□□□ 0.78
SPTSSA-201ENST00000298130 SSBP2P81877 361 aaPredicted RBP19.9■□□□□ 0.78
SPTSSA-201ENST00000298130 TOMM20LQ6UXN7 152 aa19.9■□□□□ 0.78
SPTSSA-201ENST00000298130 NEUROG1Q92886 237 aa19.9■□□□□ 0.78
SPTSSA-201ENST00000298130 LINC00479Q96M42 142 aa19.9■□□□□ 0.78
SPTSSA-201ENST00000298130 TEX50A0A1B0GTY4 177 aa19.9■□□□□ 0.78
SPTSSA-201ENST00000298130 HELTA6NFD8 242 aa19.9■□□□□ 0.78
SPTSSA-201ENST00000298130 CRISP2P16562 243 aa19.9■□□□□ 0.78
SPTSSA-201ENST00000298130 CCL3L1P16619 93 aa19.9■□□□□ 0.78
SPTSSA-201ENST00000298130 RAB4BP61018 213 aa19.9■□□□□ 0.78
SPTSSA-201ENST00000298130 ZNF439Q8NDP4 499 aa19.9■□□□□ 0.78
SPTSSA-201ENST00000298130 PARD6AQ9NPB6 346 aa19.9■□□□□ 0.78
SPTSSA-201ENST00000298130 SLC45A2Q9UMX9 530 aa19.9■□□□□ 0.78
SPTSSA-201ENST00000298130 TPRP12270 2363 aaKnown RBP19.9■□□□□ 0.78
SPTSSA-201ENST00000298130 GNG4P50150 75 aa19.89■□□□□ 0.78
SPTSSA-201ENST00000298130 YPEL3P61236 119 aaPredicted RBP19.89■□□□□ 0.78
SPTSSA-201ENST00000298130 BAGE3Q86Y29 109 aa19.89■□□□□ 0.78
SPTSSA-201ENST00000298130 BAGE2Q86Y30 109 aa19.89■□□□□ 0.78
SPTSSA-201ENST00000298130 SAA1P0DJI8 122 aaPredicted RBP19.89■□□□□ 0.77
SPTSSA-201ENST00000298130 MGST1P10620 155 aaKnown RBP19.89■□□□□ 0.77
SPTSSA-201ENST00000298130 CHRNB4P30926 498 aa19.89■□□□□ 0.77
SPTSSA-201ENST00000298130 DIAPH2-AS1Q14236 149 aa19.89■□□□□ 0.77
SPTSSA-201ENST00000298130 STUMQ69YW2 141 aa19.89■□□□□ 0.77
SPTSSA-201ENST00000298130 HSPB9Q9BQS6 159 aa19.89■□□□□ 0.77
SPTSSA-201ENST00000298130 SNHG12Q9BXW3 62 aa19.89■□□□□ 0.77
SPTSSA-201ENST00000298130 V9GYV3 84 aa19.89■□□□□ 0.77
SPTSSA-201ENST00000298130 MBD3L4A6NDZ8 208 aaPredicted RBP19.89■□□□□ 0.77
SPTSSA-201ENST00000298130 MBD3L3A6NE82 208 aaPredicted RBP19.89■□□□□ 0.77
SPTSSA-201ENST00000298130 MBD3L5A6NJ08 208 aaPredicted RBP19.89■□□□□ 0.77
SPTSSA-201ENST00000298130 GGTLC3B5MD39 225 aa19.89■□□□□ 0.77
SPTSSA-201ENST00000298130 TIMM23BQ5SRD1 257 aa19.89■□□□□ 0.77
SPTSSA-201ENST00000298130 MBD3L2Q8NHZ7 208 aaPredicted RBP19.89■□□□□ 0.77
SPTSSA-201ENST00000298130 C10orf55Q5SWW7 151 aa19.88■□□□□ 0.77
SPTSSA-201ENST00000298130 RNF114Q9Y508 228 aa19.88■□□□□ 0.77
SPTSSA-201ENST00000298130 LGALS4P56470 323 aa19.88■□□□□ 0.77
SPTSSA-201ENST00000298130 C2orf88Q9BSF0 95 aa19.88■□□□□ 0.77
SPTSSA-201ENST00000298130 SERTAD4Q9NUC0 356 aa19.88■□□□□ 0.77
SPTSSA-201ENST00000298130 UPK2O00526 184 aa19.87■□□□□ 0.77
SPTSSA-201ENST00000298130 MT-CO2P00403 227 aa19.87■□□□□ 0.77
SPTSSA-201ENST00000298130 RPEL1Q2QD12 228 aa19.87■□□□□ 0.77
SPTSSA-201ENST00000298130 TXNDC17Q9BRA2 123 aa19.87■□□□□ 0.77
SPTSSA-201ENST00000298130 MRPL20Q9BYC9 149 aaKnown RBP19.87■□□□□ 0.77
SPTSSA-201ENST00000298130 MRPL54Q6P161 138 aaKnown RBP19.87■□□□□ 0.77
SPTSSA-201ENST00000298130 DYSFO75923 2080 aa19.86■□□□□ 0.77
SPTSSA-201ENST00000298130 PRCDQ00LT1 54 aa19.86■□□□□ 0.77
SPTSSA-201ENST00000298130 BSNQ9UPA5 3926 aa19.86■□□□□ 0.77
SPTSSA-201ENST00000298130 A8MXE2 369 aa19.86■□□□□ 0.77
SPTSSA-201ENST00000298130 PRB3Q04118 309 aaPredicted RBP19.86■□□□□ 0.77
SPTSSA-201ENST00000298130 SH3BGRL2Q9UJC5 107 aa19.86■□□□□ 0.77
SPTSSA-201ENST00000298130 ACACAQ13085 2346 aa19.86■□□□□ 0.77
SPTSSA-201ENST00000298130 TANC2Q9HCD6 1990 aa19.86■□□□□ 0.77
SPTSSA-201ENST00000298130 ZFHX2Q9C0A1 2572 aaPredicted RBP19.85■□□□□ 0.77
SPTSSA-201ENST00000298130 IGLV3-9A0A075B6K5 115 aa19.85■□□□□ 0.77
SPTSSA-201ENST00000298130 ZADH2Q8N4Q0 377 aa19.85■□□□□ 0.77
SPTSSA-201ENST00000298130 VN1R17PQ8TDU5 208 aa19.85■□□□□ 0.77
SPTSSA-201ENST00000298130 BTF3L4Q96K17 158 aa19.85■□□□□ 0.77
SPTSSA-201ENST00000298130 PRNDQ9UKY0 176 aa19.85■□□□□ 0.77
SPTSSA-201ENST00000298130 ZNF705AQ6ZN79 300 aaPredicted RBP19.85■□□□□ 0.77
SPTSSA-201ENST00000298130 C11orf52Q96A22 123 aa19.85■□□□□ 0.77
SPTSSA-201ENST00000298130 SSBP3Q9BWW4 388 aaPredicted RBP19.85■□□□□ 0.77
SPTSSA-201ENST00000298130 SAMD10Q9BYL1 202 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms