RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 LYSMD4Q5XG99 296 aa8.47□□□□□ -1.05
LMX1A-201ENST00000294816 SLC35E4Q6ICL7 350 aa8.47□□□□□ -1.05
LMX1A-201ENST00000294816 SMIM15Q7Z3B0 74 aa8.47□□□□□ -1.05
LMX1A-201ENST00000294816 TMEM167BQ9NRX6 74 aa8.47□□□□□ -1.05
LMX1A-201ENST00000294816 TECRQ9NZ01 308 aaKnown RBP8.47□□□□□ -1.05
LMX1A-201ENST00000294816 LY96Q9Y6Y9 160 aa8.47□□□□□ -1.05
LMX1A-201ENST00000294816 U3KQA8 63 aa8.47□□□□□ -1.05
LMX1A-201ENST00000294816 NBEAQ8NFP9 2946 aa8.47□□□□□ -1.05
LMX1A-201ENST00000294816 IGKV3D-15A0A087WSY6 115 aa8.47□□□□□ -1.05
LMX1A-201ENST00000294816 hDV102S1A0JD36 115 aa8.47□□□□□ -1.05
LMX1A-201ENST00000294816 IZUMO1RA6ND01 250 aa8.47□□□□□ -1.05
LMX1A-201ENST00000294816 OR2T8A6NH00 312 aa8.47□□□□□ -1.05
LMX1A-201ENST00000294816 ZNF891A8MT65 544 aaPredicted RBP8.47□□□□□ -1.05
LMX1A-201ENST00000294816 Q8TCH9 128 aa8.47□□□□□ -1.05
LMX1A-201ENST00000294816 NANOS1Q8WY41 292 aaKnown RBP8.47□□□□□ -1.05
LMX1A-201ENST00000294816 SGK494Q96LW2 274 aa8.47□□□□□ -1.05
LMX1A-201ENST00000294816 TRIB1Q96RU8 372 aa8.47□□□□□ -1.05
LMX1A-201ENST00000294816 MCRIP2Q9BUT9 160 aaKnown RBP8.47□□□□□ -1.05
LMX1A-201ENST00000294816 RPH3ALQ9UNE2 315 aa8.47□□□□□ -1.05
LMX1A-201ENST00000294816 OR4C46A6NHA9 309 aa8.47□□□□□ -1.05
LMX1A-201ENST00000294816 GGTLC3B5MD39 225 aa8.47□□□□□ -1.05
LMX1A-201ENST00000294816 FOXA3P55318 350 aaPredicted RBP8.47□□□□□ -1.05
LMX1A-201ENST00000294816 MRPL49Q13405 166 aaKnown RBP8.47□□□□□ -1.05
LMX1A-201ENST00000294816 B4GALT7Q9UBV7 327 aa8.47□□□□□ -1.05
LMX1A-201ENST00000294816 AREGP15514 252 aa8.46□□□□□ -1.05
LMX1A-201ENST00000294816 RAB30Q15771 203 aa8.46□□□□□ -1.05
LMX1A-201ENST00000294816 AMMECR1LQ6DCA0 310 aa8.46□□□□□ -1.05
LMX1A-201ENST00000294816 LINC00696Q6ZRV3 163 aa8.46□□□□□ -1.05
LMX1A-201ENST00000294816 SPACA3Q8IXA5 215 aa8.46□□□□□ -1.05
LMX1A-201ENST00000294816 C1orf159Q96HA4 380 aa8.46□□□□□ -1.05
LMX1A-201ENST00000294816 TRAV30A0A087WSZ9 112 aa8.46□□□□□ -1.06
LMX1A-201ENST00000294816 ISLRO14498 428 aa8.46□□□□□ -1.06
LMX1A-201ENST00000294816 CD24P25063 80 aa8.46□□□□□ -1.06
LMX1A-201ENST00000294816 PPP1R32Q7Z5V6 425 aa8.46□□□□□ -1.06
LMX1A-201ENST00000294816 NEUROG1Q92886 237 aa8.46□□□□□ -1.06
LMX1A-201ENST00000294816 ZC2HC1AQ96GY0 325 aa8.46□□□□□ -1.06
LMX1A-201ENST00000294816 CST9LQ9H4G1 147 aa8.46□□□□□ -1.06
LMX1A-201ENST00000294816 MPV17P39210 176 aa8.45□□□□□ -1.06
LMX1A-201ENST00000294816 HES3Q5TGS1 186 aa8.45□□□□□ -1.06
LMX1A-201ENST00000294816 ZNF841Q6ZN19 808 aa8.45□□□□□ -1.06
LMX1A-201ENST00000294816 MUC15Q8N387 334 aa8.45□□□□□ -1.06
LMX1A-201ENST00000294816 PNKDQ8N490 385 aa8.45□□□□□ -1.06
LMX1A-201ENST00000294816 OR52E5Q8NH55 327 aa8.45□□□□□ -1.06
LMX1A-201ENST00000294816 SAP30LQ9HAJ7 183 aa8.45□□□□□ -1.06
LMX1A-201ENST00000294816 TNFRSF19Q9NS68 423 aa8.45□□□□□ -1.06
LMX1A-201ENST00000294816 LSM4Q9Y4Z0 139 aaKnown RBP8.45□□□□□ -1.06
LMX1A-201ENST00000294816 SVILO95425 2214 aa8.45□□□□□ -1.06
LMX1A-201ENST00000294816 MUC21A0A0G2JKD1 596 aa8.45□□□□□ -1.06
LMX1A-201ENST00000294816 MUC21A0A140T8X8 626 aa8.45□□□□□ -1.06
LMX1A-201ENST00000294816 HSBP1L1C9JCN9 74 aa8.45□□□□□ -1.06
LMX1A-201ENST00000294816 SMPD2O60906 423 aa8.45□□□□□ -1.06
LMX1A-201ENST00000294816 PROP1O75360 226 aa8.45□□□□□ -1.06
LMX1A-201ENST00000294816 UBE2L3P68036 154 aaKnown RBP8.45□□□□□ -1.06
LMX1A-201ENST00000294816 MUC21Q5SSG8 566 aa8.45□□□□□ -1.06
LMX1A-201ENST00000294816 SPATA12Q7Z6I5 190 aa8.45□□□□□ -1.06
LMX1A-201ENST00000294816 OR4F17Q8NGA8 305 aa8.45□□□□□ -1.06
LMX1A-201ENST00000294816 MRPS17Q9Y2R5 130 aaKnown RBP8.45□□□□□ -1.06
LMX1A-201ENST00000294816 TRAV5A0A0B4J249 113 aa8.45□□□□□ -1.06
LMX1A-201ENST00000294816 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.45□□□□□ -1.06
LMX1A-201ENST00000294816 PRSS46E5RG02 174 aa8.45□□□□□ -1.06
LMX1A-201ENST00000294816 CYC1P08574 325 aa8.45□□□□□ -1.06
LMX1A-201ENST00000294816 FABP6P51161 128 aa8.45□□□□□ -1.06
LMX1A-201ENST00000294816 MLANAQ16655 118 aa8.45□□□□□ -1.06
LMX1A-201ENST00000294816 OCIAD2Q56VL3 154 aa8.45□□□□□ -1.06
LMX1A-201ENST00000294816 BCL2L2Q92843 193 aaPredicted RBP8.45□□□□□ -1.06
LMX1A-201ENST00000294816 TMEM70Q9BUB7 260 aa8.45□□□□□ -1.06
LMX1A-201ENST00000294816 SMIM27A0A1W2PRY6 76 aa8.44□□□□□ -1.06
LMX1A-201ENST00000294816 TIMM8AO60220 97 aaPredicted RBP8.44□□□□□ -1.06
LMX1A-201ENST00000294816 LYZL6O75951 148 aa8.44□□□□□ -1.06
LMX1A-201ENST00000294816 TAS2R45P59539 299 aa8.44□□□□□ -1.06
LMX1A-201ENST00000294816 ARG2P78540 354 aa8.44□□□□□ -1.06
LMX1A-201ENST00000294816 MORN2Q502X0 79 aa8.44□□□□□ -1.06
LMX1A-201ENST00000294816 WDR31Q8NA23 367 aa8.44□□□□□ -1.06
LMX1A-201ENST00000294816 PMCHL2Q9BQD1 86 aa8.44□□□□□ -1.06
LMX1A-201ENST00000294816 TNCP24821 2201 aa8.44□□□□□ -1.06
LMX1A-201ENST00000294816 CORTO00230 105 aa8.44□□□□□ -1.06
LMX1A-201ENST00000294816 SNAI2O43623 268 aa8.44□□□□□ -1.06
LMX1A-201ENST00000294816 REG1AP05451 166 aa8.44□□□□□ -1.06
LMX1A-201ENST00000294816 GDF5OSQ5U4N7 250 aa8.44□□□□□ -1.06
LMX1A-201ENST00000294816 ABHD17BQ5VST6 288 aa8.44□□□□□ -1.06
LMX1A-201ENST00000294816 ACP7Q6ZNF0 438 aa8.44□□□□□ -1.06
LMX1A-201ENST00000294816 LINC00173Q6ZV60 143 aa8.44□□□□□ -1.06
LMX1A-201ENST00000294816 SAP25Q8TEE9 199 aa8.44□□□□□ -1.06
LMX1A-201ENST00000294816 MRPL27Q9P0M9 148 aaKnown RBP8.44□□□□□ -1.06
LMX1A-201ENST00000294816 TET2Q6N021 2002 aaPredicted RBP8.44□□□□□ -1.06
LMX1A-201ENST00000294816 TOX4O94842 621 aa8.44□□□□□ -1.06
LMX1A-201ENST00000294816 IGLV2-8P01709 118 aa8.44□□□□□ -1.06
LMX1A-201ENST00000294816 ZNF137PP52743 207 aa8.44□□□□□ -1.06
LMX1A-201ENST00000294816 FAM214BQ7L5A3 538 aa8.44□□□□□ -1.06
LMX1A-201ENST00000294816 NUP35Q8NFH5 326 aa8.44□□□□□ -1.06
LMX1A-201ENST00000294816 OR8B3Q8NGG8 313 aa8.44□□□□□ -1.06
LMX1A-201ENST00000294816 FAM173AQ9BQD7 235 aa8.44□□□□□ -1.06
LMX1A-201ENST00000294816 HES4Q9HCC6 221 aa8.44□□□□□ -1.06
LMX1A-201ENST00000294816 DUSP13Q9UII6 198 aa8.44□□□□□ -1.06
LMX1A-201ENST00000294816 H0YJW9 148 aa8.43□□□□□ -1.06
LMX1A-201ENST00000294816 PPOXP50336 477 aa8.43□□□□□ -1.06
LMX1A-201ENST00000294816 AARDQ4LEZ3 155 aa8.43□□□□□ -1.06
LMX1A-201ENST00000294816 SLC25A34Q6PIV7 304 aa8.43□□□□□ -1.06
LMX1A-201ENST00000294816 SSX8Q7RTT4 187 aa8.43□□□□□ -1.06
LMX1A-201ENST00000294816 OR9G1Q8NH87 305 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms