RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 SOX21Q9Y651 276 aaPredicted RBP10□□□□□ -0.81
SYNGAP1-201ENST00000293748 H7C2G1 150 aa9.99□□□□□ -0.81
SYNGAP1-201ENST00000293748 J3QW42 95 aa9.99□□□□□ -0.81
SYNGAP1-201ENST00000293748 IGHG3P01860 377 aa9.99□□□□□ -0.81
SYNGAP1-201ENST00000293748 FAM214BQ7L5A3 538 aa9.99□□□□□ -0.81
SYNGAP1-201ENST00000293748 TMEM170AQ8WVE7 144 aa9.99□□□□□ -0.81
SYNGAP1-201ENST00000293748 CCL13Q99616 98 aa9.99□□□□□ -0.81
SYNGAP1-201ENST00000293748 RTBDNQ9BSG5 229 aaPredicted RBP9.99□□□□□ -0.81
SYNGAP1-201ENST00000293748 F11RQ9Y624 299 aaKnown RBP9.99□□□□□ -0.81
SYNGAP1-201ENST00000293748 COL27A1Q8IZC6 1860 aaPredicted RBP9.99□□□□□ -0.81
SYNGAP1-201ENST00000293748 C16orf97H3BN30 126 aa9.99□□□□□ -0.81
SYNGAP1-201ENST00000293748 STAG3L3P0CL85 134 aa9.99□□□□□ -0.81
SYNGAP1-201ENST00000293748 PSG9Q00887 426 aa9.99□□□□□ -0.81
SYNGAP1-201ENST00000293748 HCP5Q6MZN7 132 aa9.99□□□□□ -0.81
SYNGAP1-201ENST00000293748 ABHD12Q8N2K0 398 aa9.99□□□□□ -0.81
SYNGAP1-201ENST00000293748 TTC9CQ8N5M4 171 aa9.99□□□□□ -0.81
SYNGAP1-201ENST00000293748 OR10J6PQ8NGY7 276 aa9.99□□□□□ -0.81
SYNGAP1-201ENST00000293748 C14orf144Q96I85 54 aa9.99□□□□□ -0.81
SYNGAP1-201ENST00000293748 LAMTOR2Q9Y2Q5 125 aa9.99□□□□□ -0.81
SYNGAP1-201ENST00000293748 ANOS1P23352 680 aa9.99□□□□□ -0.81
SYNGAP1-201ENST00000293748 OR4D5Q8NGN0 318 aa9.99□□□□□ -0.81
SYNGAP1-201ENST00000293748 SSC4DQ8WTU2 575 aa9.99□□□□□ -0.81
SYNGAP1-201ENST00000293748 COPS9Q8WXC6 57 aa9.99□□□□□ -0.81
SYNGAP1-201ENST00000293748 SSBP3Q9BWW4 388 aaPredicted RBP9.99□□□□□ -0.81
SYNGAP1-201ENST00000293748 OPN3Q9H1Y3 402 aaPredicted RBP9.99□□□□□ -0.81
SYNGAP1-201ENST00000293748 FBLN5Q9UBX5 448 aa9.99□□□□□ -0.81
SYNGAP1-201ENST00000293748 IGKV3-7A0A075B6H7 116 aa9.99□□□□□ -0.81
SYNGAP1-201ENST00000293748 RAMP1O60894 148 aa9.99□□□□□ -0.81
SYNGAP1-201ENST00000293748 PRSS2P07478 247 aa9.99□□□□□ -0.81
SYNGAP1-201ENST00000293748 WNT10AQ9GZT5 417 aa9.99□□□□□ -0.81
SYNGAP1-201ENST00000293748 IDI2-AS1Q9NZ38 188 aa9.99□□□□□ -0.81
SYNGAP1-201ENST00000293748 TMEM56-RWDD3S4R434 201 aa9.99□□□□□ -0.81
SYNGAP1-201ENST00000293748 CACNA1GO43497 2377 aa9.98□□□□□ -0.81
SYNGAP1-201ENST00000293748 A0A0G2JMM0 328 aa9.98□□□□□ -0.81
SYNGAP1-201ENST00000293748 A0A1W2PPB8 328 aa9.98□□□□□ -0.81
SYNGAP1-201ENST00000293748 A0A1W2PRS3 328 aa9.98□□□□□ -0.81
SYNGAP1-201ENST00000293748 KIR3DP1A8MWS1 328 aa9.98□□□□□ -0.81
SYNGAP1-201ENST00000293748 LGALS3P17931 250 aaKnown RBP9.98□□□□□ -0.81
SYNGAP1-201ENST00000293748 Q8NA96 180 aa9.98□□□□□ -0.81
SYNGAP1-201ENST00000293748 RNF126Q9BV68 326 aa9.98□□□□□ -0.81
SYNGAP1-201ENST00000293748 WNT5BQ9H1J7 359 aa9.98□□□□□ -0.81
SYNGAP1-201ENST00000293748 C7orf71A4D174 169 aa9.98□□□□□ -0.81
SYNGAP1-201ENST00000293748 ECSCRQ19T08 205 aa9.98□□□□□ -0.81
SYNGAP1-201ENST00000293748 LY6G6FQ5SQ64 297 aa9.98□□□□□ -0.81
SYNGAP1-201ENST00000293748 NR2C2APQ86WQ0 139 aa9.98□□□□□ -0.81
SYNGAP1-201ENST00000293748 ANKRD11Q6UB99 2663 aaPredicted RBP9.98□□□□□ -0.81
SYNGAP1-201ENST00000293748 IGLV3-32A0A0A0MS00 114 aa9.98□□□□□ -0.81
SYNGAP1-201ENST00000293748 MST1P26927 711 aa9.98□□□□□ -0.81
SYNGAP1-201ENST00000293748 RAB9AP51151 201 aa9.98□□□□□ -0.81
SYNGAP1-201ENST00000293748 ZNF124Q15973 351 aa9.98□□□□□ -0.81
SYNGAP1-201ENST00000293748 SAPCD1Q5SSQ6 148 aa9.98□□□□□ -0.81
SYNGAP1-201ENST00000293748 ZNF826PQ6ZT77 177 aa9.98□□□□□ -0.81
SYNGAP1-201ENST00000293748 SYT8Q8NBV8 401 aa9.98□□□□□ -0.81
SYNGAP1-201ENST00000293748 RRHO14718 337 aa9.97□□□□□ -0.81
SYNGAP1-201ENST00000293748 IL6RP08887 468 aaPredicted RBP9.97□□□□□ -0.81
SYNGAP1-201ENST00000293748 MFAP4P55083 255 aa9.97□□□□□ -0.81
SYNGAP1-201ENST00000293748 FOXA3P55318 350 aaPredicted RBP9.97□□□□□ -0.81
SYNGAP1-201ENST00000293748 PAPPA-AS1Q5QFB9 102 aa9.97□□□□□ -0.81
SYNGAP1-201ENST00000293748 FADS6Q8N9I5 356 aa9.97□□□□□ -0.81
SYNGAP1-201ENST00000293748 NUP210LQ5VU65 1888 aa9.97□□□□□ -0.81
SYNGAP1-201ENST00000293748 ZNF324BQ6AW86 544 aaPredicted RBP9.97□□□□□ -0.81
SYNGAP1-201ENST00000293748 ALKBH7Q9BT30 221 aaPredicted RBP9.97□□□□□ -0.81
SYNGAP1-201ENST00000293748 MRPL13Q9BYD1 178 aaKnown RBP9.97□□□□□ -0.81
SYNGAP1-201ENST00000293748 FOXD3Q9UJU5 478 aaPredicted RBP9.97□□□□□ -0.81
SYNGAP1-201ENST00000293748 RTTNQ86VV8 2226 aa9.97□□□□□ -0.81
SYNGAP1-201ENST00000293748 A0A1W2PS18 150 aa9.97□□□□□ -0.81
SYNGAP1-201ENST00000293748 HIST1H2BKO60814 126 aa9.97□□□□□ -0.81
SYNGAP1-201ENST00000293748 HIST1H2BJP06899 126 aa9.97□□□□□ -0.81
SYNGAP1-201ENST00000293748 RFPL3SP0C7P2 107 aa9.97□□□□□ -0.81
SYNGAP1-201ENST00000293748 HIST1H2BOP23527 126 aa9.97□□□□□ -0.81
SYNGAP1-201ENST00000293748 HIST1H2BBP33778 126 aa9.97□□□□□ -0.81
SYNGAP1-201ENST00000293748 HIST1H2BDP58876 126 aa9.97□□□□□ -0.81
SYNGAP1-201ENST00000293748 HIST1H2BCP62807 126 aa9.97□□□□□ -0.81
SYNGAP1-201ENST00000293748 RPL23P62829 140 aaKnown RBP9.97□□□□□ -0.81
SYNGAP1-201ENST00000293748 HIST2H2BEQ16778 126 aa9.97□□□□□ -0.81
SYNGAP1-201ENST00000293748 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.97□□□□□ -0.81
SYNGAP1-201ENST00000293748 OR4C13Q8NGP0 309 aa9.97□□□□□ -0.81
SYNGAP1-201ENST00000293748 HIST1H2BHQ93079 126 aa9.97□□□□□ -0.81
SYNGAP1-201ENST00000293748 HIST1H2BNQ99877 126 aa9.97□□□□□ -0.81
SYNGAP1-201ENST00000293748 HIST1H2BMQ99879 126 aa9.97□□□□□ -0.81
SYNGAP1-201ENST00000293748 TMEM106BQ9NUM4 274 aa9.97□□□□□ -0.81
SYNGAP1-201ENST00000293748 PINLYPA6NC86 204 aa9.97□□□□□ -0.81
SYNGAP1-201ENST00000293748 SLC25A17O43808 307 aa9.97□□□□□ -0.81
SYNGAP1-201ENST00000293748 EMP1P54849 157 aa9.97□□□□□ -0.81
SYNGAP1-201ENST00000293748 CCL8P80075 99 aa9.97□□□□□ -0.81
SYNGAP1-201ENST00000293748 MBNL2Q5VZF2 373 aaKnown RBP9.97□□□□□ -0.81
SYNGAP1-201ENST00000293748 ITLN1Q8WWA0 313 aa9.97□□□□□ -0.81
SYNGAP1-201ENST00000293748 C16orf92Q96LL3 132 aa9.97□□□□□ -0.81
SYNGAP1-201ENST00000293748 BBC3Q96PG8 261 aaPredicted RBP9.97□□□□□ -0.81
SYNGAP1-201ENST00000293748 METTL26Q96S19 204 aa9.97□□□□□ -0.81
SYNGAP1-201ENST00000293748 TIMP4Q99727 224 aa9.97□□□□□ -0.81
SYNGAP1-201ENST00000293748 NDUFA2O43678 99 aa9.96□□□□□ -0.81
SYNGAP1-201ENST00000293748 HTN1P15515 57 aa9.96□□□□□ -0.81
SYNGAP1-201ENST00000293748 MPZP25189 248 aa9.96□□□□□ -0.81
SYNGAP1-201ENST00000293748 FCGR2BP31994 310 aaPredicted RBP9.96□□□□□ -0.81
SYNGAP1-201ENST00000293748 CX3CL1P78423 397 aa9.96□□□□□ -0.81
SYNGAP1-201ENST00000293748 CIRBPQ14011 172 aaKnown RBP9.96□□□□□ -0.81
SYNGAP1-201ENST00000293748 FAM53AQ6NSI3 398 aaPredicted RBP9.96□□□□□ -0.81
SYNGAP1-201ENST00000293748 LRTM2Q8N967 370 aa9.96□□□□□ -0.81
SYNGAP1-201ENST00000293748 NPIPB3Q92617 1050 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms