RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 A0A1W2PPQ1 181 aa10.52□□□□□ -0.73
CPSF6-201ENST00000266679 F6UZH7 168 aa10.52□□□□□ -0.73
CPSF6-201ENST00000266679 SAA1P0DJI8 122 aaPredicted RBP10.52□□□□□ -0.73
CPSF6-201ENST00000266679 CHRNA7P36544 502 aa10.52□□□□□ -0.73
CPSF6-201ENST00000266679 REG1BP48304 166 aa10.52□□□□□ -0.73
CPSF6-201ENST00000266679 PRCDQ00LT1 54 aa10.52□□□□□ -0.73
CPSF6-201ENST00000266679 ZNF833PQ6ZTB9 187 aa10.52□□□□□ -0.73
CPSF6-201ENST00000266679 HIST3H2BBQ8N257 126 aa10.52□□□□□ -0.73
CPSF6-201ENST00000266679 CCL17Q92583 94 aa10.52□□□□□ -0.73
CPSF6-201ENST00000266679 ZNF714Q96N38 554 aa10.52□□□□□ -0.73
CPSF6-201ENST00000266679 PCGF1Q9BSM1 259 aa10.52□□□□□ -0.73
CPSF6-201ENST00000266679 GPR61Q9BZJ8 451 aa10.52□□□□□ -0.73
CPSF6-201ENST00000266679 SRD5A3Q9H8P0 318 aa10.52□□□□□ -0.73
CPSF6-201ENST00000266679 GAR1Q9NY12 217 aaKnown RBP10.52□□□□□ -0.73
CPSF6-201ENST00000266679 DOPEY1Q5JWR5 2465 aa10.52□□□□□ -0.73
CPSF6-201ENST00000266679 CSMD1Q96PZ7 3565 aa10.51□□□□□ -0.73
CPSF6-201ENST00000266679 ITPR2Q14571 2701 aa10.51□□□□□ -0.73
CPSF6-201ENST00000266679 PPIAL4EA0A075B759 164 aa10.51□□□□□ -0.73
CPSF6-201ENST00000266679 TEX50A0A1B0GTY4 177 aa10.51□□□□□ -0.73
CPSF6-201ENST00000266679 PGPEP1LA6NFU8 196 aa10.51□□□□□ -0.73
CPSF6-201ENST00000266679 PPIAL4DF5H284 164 aa10.51□□□□□ -0.73
CPSF6-201ENST00000266679 TMEM178BH3BS89 294 aa10.51□□□□□ -0.73
CPSF6-201ENST00000266679 VENTXO95231 258 aa10.51□□□□□ -0.73
CPSF6-201ENST00000266679 PPIAL4FP0DN26 164 aa10.51□□□□□ -0.73
CPSF6-201ENST00000266679 EFNB3Q15768 340 aa10.51□□□□□ -0.73
CPSF6-201ENST00000266679 LYPD2Q6UXB3 125 aa10.51□□□□□ -0.73
CPSF6-201ENST00000266679 MOB3BQ86TA1 216 aa10.51□□□□□ -0.73
CPSF6-201ENST00000266679 OR4X1Q8NH49 305 aa10.51□□□□□ -0.73
CPSF6-201ENST00000266679 ANAPC16Q96DE5 110 aa10.51□□□□□ -0.73
CPSF6-201ENST00000266679 PYGO2Q9BRQ0 406 aa10.51□□□□□ -0.73
CPSF6-201ENST00000266679 MIOXQ9UGB7 285 aa10.51□□□□□ -0.73
CPSF6-201ENST00000266679 PPIAL4AQ9Y536 164 aa10.51□□□□□ -0.73
CPSF6-201ENST00000266679 ELOA3CA0A087WX78 387 aaPredicted RBP10.5□□□□□ -0.73
CPSF6-201ENST00000266679 SCO2A0A1W2PP80 73 aa10.5□□□□□ -0.73
CPSF6-201ENST00000266679 APOA2P02652 100 aa10.5□□□□□ -0.73
CPSF6-201ENST00000266679 GCHFRP30047 84 aa10.5□□□□□ -0.73
CPSF6-201ENST00000266679 RHOBP62745 196 aa10.5□□□□□ -0.73
CPSF6-201ENST00000266679 MEF2CQ06413 473 aaPredicted RBP10.5□□□□□ -0.73
CPSF6-201ENST00000266679 RAB31Q13636 194 aa10.5□□□□□ -0.73
CPSF6-201ENST00000266679 TMEM200BQ69YZ2 307 aa10.5□□□□□ -0.73
CPSF6-201ENST00000266679 LINC01551Q86U37 167 aa10.5□□□□□ -0.73
CPSF6-201ENST00000266679 ZNF114Q8NC26 417 aa10.5□□□□□ -0.73
CPSF6-201ENST00000266679 OR10D4PQ8NGN7 298 aa10.5□□□□□ -0.73
CPSF6-201ENST00000266679 NEUROG1Q92886 237 aa10.5□□□□□ -0.73
CPSF6-201ENST00000266679 HARBI1Q96MB7 349 aa10.5□□□□□ -0.73
CPSF6-201ENST00000266679 SEPSECSQ9HD40 501 aaKnown RBP10.5□□□□□ -0.73
CPSF6-201ENST00000266679 JKAMPQ9P055 326 aa10.5□□□□□ -0.73
CPSF6-201ENST00000266679 YTHDF2Q9Y5A9 579 aaKnown RBP10.5□□□□□ -0.73
CPSF6-201ENST00000266679 LINC00587B1AMM8 73 aa10.5□□□□□ -0.73
CPSF6-201ENST00000266679 FOXH1O75593 365 aa10.5□□□□□ -0.73
CPSF6-201ENST00000266679 ACTL6BO94805 426 aa10.5□□□□□ -0.73
CPSF6-201ENST00000266679 HNF1AP20823 631 aa10.5□□□□□ -0.73
CPSF6-201ENST00000266679 WFIKKN1Q96NZ8 548 aa10.5□□□□□ -0.73
CPSF6-201ENST00000266679 OR51M1Q9H341 326 aa10.5□□□□□ -0.73
CPSF6-201ENST00000266679 ZNF257Q9Y2Q1 563 aa10.5□□□□□ -0.73
CPSF6-201ENST00000266679 NOTCH2Q04721 2471 aa10.49□□□□□ -0.73
CPSF6-201ENST00000266679 PPP5D1E7EU14 171 aa10.49□□□□□ -0.73
CPSF6-201ENST00000266679 CHRNB4P30926 498 aa10.49□□□□□ -0.73
CPSF6-201ENST00000266679 RPL29P47914 159 aaKnown RBP10.49□□□□□ -0.73
CPSF6-201ENST00000266679 DYNLRB1Q9NP97 96 aa10.49□□□□□ -0.73
CPSF6-201ENST00000266679 TMEM106BQ9NUM4 274 aa10.49□□□□□ -0.73
CPSF6-201ENST00000266679 BET1LQ9NYM9 111 aa10.49□□□□□ -0.73
CPSF6-201ENST00000266679 ZNF835Q9Y2P0 537 aa10.49□□□□□ -0.73
CPSF6-201ENST00000266679 A1L4Q6 167 aa10.49□□□□□ -0.73
CPSF6-201ENST00000266679 H0YJW9 148 aa10.49□□□□□ -0.73
CPSF6-201ENST00000266679 NDUFB3O43676 98 aa10.49□□□□□ -0.73
CPSF6-201ENST00000266679 CTAG1AP78358 180 aa10.49□□□□□ -0.73
CPSF6-201ENST00000266679 PYY3Q5JQD4 70 aa10.49□□□□□ -0.73
CPSF6-201ENST00000266679 FAM78BQ5VT40 261 aa10.49□□□□□ -0.73
CPSF6-201ENST00000266679 MIR17HGQ75NE6 70 aa10.49□□□□□ -0.73
CPSF6-201ENST00000266679 OR10W1Q8NGF6 305 aa10.49□□□□□ -0.73
CPSF6-201ENST00000266679 OR4P4Q8NGL7 312 aa10.49□□□□□ -0.73
CPSF6-201ENST00000266679 OR2T10Q8NGZ9 312 aa10.49□□□□□ -0.73
CPSF6-201ENST00000266679 POLEQ07864 2286 aa10.49□□□□□ -0.73
CPSF6-201ENST00000266679 LRBAP50851 2863 aa10.49□□□□□ -0.73
CPSF6-201ENST00000266679 LINC00869P0C866 280 aa10.48□□□□□ -0.73
CPSF6-201ENST00000266679 FABP4P15090 132 aa10.48□□□□□ -0.73
CPSF6-201ENST00000266679 SRP14P37108 136 aaKnown RBP10.48□□□□□ -0.73
CPSF6-201ENST00000266679 PRR20EP86478 221 aa10.48□□□□□ -0.73
CPSF6-201ENST00000266679 PRR20CP86479 221 aa10.48□□□□□ -0.73
CPSF6-201ENST00000266679 PRR20DP86480 221 aa10.48□□□□□ -0.73
CPSF6-201ENST00000266679 PRR20BP86481 221 aa10.48□□□□□ -0.73
CPSF6-201ENST00000266679 PRR20AP86496 221 aa10.48□□□□□ -0.73
CPSF6-201ENST00000266679 DIAPH2-AS1Q14236 149 aa10.48□□□□□ -0.73
CPSF6-201ENST00000266679 CDPF1Q6NVV7 123 aa10.48□□□□□ -0.73
CPSF6-201ENST00000266679 OR10X1Q8NGY0 326 aa10.48□□□□□ -0.73
CPSF6-201ENST00000266679 CTSZQ9UBR2 303 aa10.48□□□□□ -0.73
CPSF6-201ENST00000266679 TNCP24821 2201 aa10.48□□□□□ -0.73
CPSF6-201ENST00000266679 TRBV20OR9-2A0A075B6H5 130 aa10.48□□□□□ -0.73
CPSF6-201ENST00000266679 E7EQL1 145 aa10.48□□□□□ -0.73
CPSF6-201ENST00000266679 GGCTO75223 188 aaKnown RBP10.48□□□□□ -0.73
CPSF6-201ENST00000266679 RNASE2P10153 161 aaKnown RBP10.48□□□□□ -0.73
CPSF6-201ENST00000266679 GATA2P23769 480 aaPredicted RBP10.48□□□□□ -0.73
CPSF6-201ENST00000266679 LRRC10Q5BKY1 277 aa10.48□□□□□ -0.73
CPSF6-201ENST00000266679 KCNIP4Q6PIL6 250 aa10.48□□□□□ -0.73
CPSF6-201ENST00000266679 OSR1Q8TAX0 266 aaPredicted RBP10.48□□□□□ -0.73
CPSF6-201ENST00000266679 RNASE6Q93091 150 aaKnown RBP10.48□□□□□ -0.73
CPSF6-201ENST00000266679 PSMG3-AS1Q96PY0 264 aa10.48□□□□□ -0.73
CPSF6-201ENST00000266679 PCNX1Q96RV3 2341 aa10.47□□□□□ -0.73
CPSF6-201ENST00000266679 SHISA9B4DS77 424 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms